RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 Q8N2B8 174 aa4.8□□□□□ -1.64
AP000547.3-204ENST00000588548 C11orf45Q8TAV5 145 aa4.8□□□□□ -1.64
AP000547.3-204ENST00000588548 TMEM141Q96I45 108 aa4.8□□□□□ -1.64
AP000547.3-204ENST00000588548 MALRD1Q5VYJ5 2156 aa4.8□□□□□ -1.64
AP000547.3-204ENST00000588548 IGLV3-12A0A075B6K2 115 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 F8WEM9 126 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 TRBV12-3P01733 135 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 MIAQ16674 131 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 C6orf223Q8N319 242 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 LEAP2Q969E1 77 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 TRAV23DV6A0A075B6W5 121 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 TRAV13-2A0A0B4J235 113 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 CGB3P0DN86 165 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 CGB7P0DN87 165 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 FAM229BQ4G0N7 80 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 ZNF826PQ6ZT77 177 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 MPLKIPQ8TAP9 179 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 TMEM167AQ8TBQ9 72 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 TIMM17AQ99595 171 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 RBM12B-AS1Q9P1G2 102 aa4.79□□□□□ -1.64
AP000547.3-204ENST00000588548 IGHV1-58A0A0C4DH39 117 aa4.78□□□□□ -1.64
AP000547.3-204ENST00000588548 IGHV3-9P01782 118 aa4.78□□□□□ -1.64
AP000547.3-204ENST00000588548 C10orf55Q5SWW7 151 aa4.78□□□□□ -1.64
AP000547.3-204ENST00000588548 Q8TAT8 98 aa4.78□□□□□ -1.64
AP000547.3-204ENST00000588548 LOC400499M0QZD8 3231 aa4.78□□□□□ -1.64
AP000547.3-204ENST00000588548 GPR179Q6PRD1 2367 aa4.78□□□□□ -1.64
AP000547.3-204ENST00000588548 IGHV7-4-1A0A0J9YVY3 117 aa4.78□□□□□ -1.64
AP000547.3-204ENST00000588548 NDUFC1O43677 76 aa4.78□□□□□ -1.64
AP000547.3-204ENST00000588548 CCL4P13236 92 aa4.78□□□□□ -1.64
AP000547.3-204ENST00000588548 ATP5EP2Q5VTU8 51 aa4.78□□□□□ -1.64
AP000547.3-204ENST00000588548 MRPL53Q96EL3 112 aaKnown RBP4.78□□□□□ -1.64
AP000547.3-204ENST00000588548 TM2D3Q9BRN9 247 aa4.78□□□□□ -1.64
AP000547.3-204ENST00000588548 CADP27708 2225 aa4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 SPENQ96T58 3664 aaKnown RBP4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 IGKV3D-20A0A0C4DH25 116 aa4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 MAGEA5P43359 124 aa4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 RMI2Q96E14 147 aa4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 RPL39LQ96EH5 51 aaKnown RBP4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 OBSCN-AS1Q96MR7 158 aa4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 PLCE1Q9P212 2302 aa4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 TRBV27A0A0K0K1C4 114 aa4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 M0R381 172 aa4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 SPRY3O43610 288 aa4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 SOSTDC1Q6X4U4 206 aa4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 UBE2E2Q96LR5 201 aa4.77□□□□□ -1.65
AP000547.3-204ENST00000588548 TECTAO75443 2155 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 ADARB2-AS1A8MUL3 147 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 CCL3P10147 92 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 DAD1P61803 113 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 C17orf58Q2M2W7 97 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 GGNQ86UU5 652 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 CXorf67Q86X51 503 aaPredicted RBP4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 CCDC140Q96MF4 163 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 CFAP47Q6ZTR5 3102 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 IGHV3-64A0A075B6Q5 118 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 IGHV3-21A0A0B4J1V1 117 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 TRBV10-3A0A0K0K1G6 114 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 CD59P13987 128 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 B3GALT5-AS1P59052 145 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 LPAL2Q16609 132 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 SPANXN1Q5VSR9 72 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 HCP5Q6MZN7 132 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 LINC00528Q8N1L1 170 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 LY6G5BQ8NDX9 201 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 C11orf21Q9P2W6 132 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 SNURFQ9Y675 71 aa4.76□□□□□ -1.65
AP000547.3-204ENST00000588548 ZFHX4Q86UP3 3567 aa4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 RNASE4P34096 147 aaKnown RBP4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 BLCAPP62952 87 aa4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 S100A7L2Q5SY68 101 aa4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 C14orf132Q9NPU4 83 aa4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 SPRR3Q9UBC9 169 aa4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 ABCA1O95477 2261 aa4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 MRPL33O75394 65 aaKnown RBP4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 PPP1R17O96001 155 aa4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 IGKV1-17P01599 117 aa4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 IGHV3-30-3P0DP02 117 aa4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 RPL39P62891 51 aaKnown RBP4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 ZNF580Q9UK33 172 aa4.75□□□□□ -1.65
AP000547.3-204ENST00000588548 IGHV1-69P01742 117 aa4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 APOC4P55056 127 aa4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 GPHB5Q86YW7 130 aa4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 FAM218AQ96MZ4 157 aa4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 LAMA5O15230 3695 aa4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 CACNA1HO95180 2353 aa4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 PRRC2CQ9Y520 2896 aaKnown RBP4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 IGKV1D-17A0A075B6S4 117 aa4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 M0R1B8 84 aa4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 ESRGQ1W209 222 aa4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 C9orf129Q5T035 196 aaKnown RBP4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 TMEM105Q8N8V8 129 aa4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 WFDC9Q8NEX5 89 aa4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 CXXC4Q9H2H0 198 aa4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 ZFHX2Q9C0A1 2572 aaPredicted RBP4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 PTPRZ1P23471 2315 aaPredicted RBP4.74□□□□□ -1.65
AP000547.3-204ENST00000588548 AHCTF1Q8WYP5 2266 aa4.73□□□□□ -1.65
AP000547.3-204ENST00000588548 IGKV3D-15A0A087WSY6 115 aa4.73□□□□□ -1.65
AP000547.3-204ENST00000588548 H3BS24 57 aa4.73□□□□□ -1.65
AP000547.3-204ENST00000588548 IGLV2-23P01705 113 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms