RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 TMEM190Q8WZ59 177 aa11.7□□□□□ -0.54
TPGS1-202ENST00000588278 CCDC168Q8NDH2 2452 aa11.7□□□□□ -0.54
TPGS1-202ENST00000588278 A0A087WWL8 130 aa11.69□□□□□ -0.54
TPGS1-202ENST00000588278 H3BUX3 64 aa11.69□□□□□ -0.54
TPGS1-202ENST00000588278 IFITM1P13164 125 aa11.69□□□□□ -0.54
TPGS1-202ENST00000588278 C15orf53Q8NAA6 179 aa11.69□□□□□ -0.54
TPGS1-202ENST00000588278 Q6ZSV7 163 aa11.69□□□□□ -0.54
TPGS1-202ENST00000588278 SLC25A29Q8N8R3 303 aa11.69□□□□□ -0.54
TPGS1-202ENST00000588278 DPH3P1Q9H4G8 78 aa11.69□□□□□ -0.54
TPGS1-202ENST00000588278 ATP5J2P56134 94 aa11.68□□□□□ -0.54
TPGS1-202ENST00000588278 NPC2P61916 151 aa11.68□□□□□ -0.54
TPGS1-202ENST00000588278 ODF3Q96PU9 254 aa11.68□□□□□ -0.54
TPGS1-202ENST00000588278 MOB4Q9Y3A3 225 aa11.68□□□□□ -0.54
TPGS1-202ENST00000588278 J3QQQ9 107 aa11.68□□□□□ -0.54
TPGS1-202ENST00000588278 RNASE4P34096 147 aaKnown RBP11.68□□□□□ -0.54
TPGS1-202ENST00000588278 HERVK_113P61574 105 aa11.68□□□□□ -0.54
TPGS1-202ENST00000588278 CCL19Q99731 98 aa11.68□□□□□ -0.54
TPGS1-202ENST00000588278 MYO9AB2RTY4 2548 aa11.68□□□□□ -0.54
TPGS1-202ENST00000588278 MUC4Q99102 2169 aa11.68□□□□□ -0.54
TPGS1-202ENST00000588278 TRBV7-1A0A0A6YYK4 115 aa11.67□□□□□ -0.54
TPGS1-202ENST00000588278 IGHV3-33P01772 117 aa11.67□□□□□ -0.54
TPGS1-202ENST00000588278 MUSTN1Q8IVN3 82 aa11.67□□□□□ -0.54
TPGS1-202ENST00000588278 MAPK1IP1LQ8NDC0 245 aa11.67□□□□□ -0.54
TPGS1-202ENST00000588278 TMEM95Q3KNT9 176 aa11.67□□□□□ -0.54
TPGS1-202ENST00000588278 GPHB5Q86YW7 130 aa11.67□□□□□ -0.54
TPGS1-202ENST00000588278 AMELXQ99217 191 aa11.67□□□□□ -0.54
TPGS1-202ENST00000588278 ZNF256Q9Y2P7 627 aaPredicted RBP11.67□□□□□ -0.54
TPGS1-202ENST00000588278 DOPEY1Q5JWR5 2465 aa11.67□□□□□ -0.54
TPGS1-202ENST00000588278 IGHV4-4A0A075B6R2 117 aa11.66□□□□□ -0.54
TPGS1-202ENST00000588278 IGHV1-69DA0A0B4J2H0 117 aa11.66□□□□□ -0.54
TPGS1-202ENST00000588278 RBAKDNA6NC62 111 aa11.66□□□□□ -0.54
TPGS1-202ENST00000588278 F5H697 171 aa11.66□□□□□ -0.54
TPGS1-202ENST00000588278 IGHV1-69P01742 117 aa11.66□□□□□ -0.54
TPGS1-202ENST00000588278 LGALS3P17931 250 aaKnown RBP11.66□□□□□ -0.54
TPGS1-202ENST00000588278 BRI3O95415 125 aa11.66□□□□□ -0.54
TPGS1-202ENST00000588278 NOTCH3Q9UM47 2321 aa11.66□□□□□ -0.54
TPGS1-202ENST00000588278 FAM74A4Q5TZK3 123 aa11.65□□□□□ -0.54
TPGS1-202ENST00000588278 CHCHD5Q9BSY4 110 aa11.65□□□□□ -0.54
TPGS1-202ENST00000588278 SONP18583 2426 aaKnown RBP11.65□□□□□ -0.54
TPGS1-202ENST00000588278 FBN2P35556 2912 aa11.65□□□□□ -0.54
TPGS1-202ENST00000588278 IGHV4-30-2A0A087WSY4 118 aa11.65□□□□□ -0.54
TPGS1-202ENST00000588278 TRAV8-4A0A0B4J246 113 aa11.65□□□□□ -0.54
TPGS1-202ENST00000588278 EDN2P20800 178 aa11.65□□□□□ -0.54
TPGS1-202ENST00000588278 PMVKQ15126 192 aa11.65□□□□□ -0.54
TPGS1-202ENST00000588278 IGIPA6NJ69 53 aa11.65□□□□□ -0.55
TPGS1-202ENST00000588278 ASIPP42127 132 aa11.65□□□□□ -0.55
TPGS1-202ENST00000588278 LINC01620Q4KN68 170 aa11.65□□□□□ -0.55
TPGS1-202ENST00000588278 PIMREGQ9BSJ6 248 aa11.65□□□□□ -0.55
TPGS1-202ENST00000588278 TMEM263Q8WUH6 116 aaKnown RBP11.64□□□□□ -0.55
TPGS1-202ENST00000588278 MEIG1Q5JSS6 88 aa11.64□□□□□ -0.55
TPGS1-202ENST00000588278 C9orf47Q6ZRZ4 202 aa11.64□□□□□ -0.55
TPGS1-202ENST00000588278 ZFAND2AQ8N6M9 145 aa11.64□□□□□ -0.55
TPGS1-202ENST00000588278 DUX3Q96PT4 197 aa11.64□□□□□ -0.55
TPGS1-202ENST00000588278 ANKRD17O75179 2603 aaKnown RBP11.64□□□□□ -0.55
TPGS1-202ENST00000588278 IGKV3-20P01619 116 aa11.63□□□□□ -0.55
TPGS1-202ENST00000588278 TRIAP1O43715 76 aa11.62□□□□□ -0.55
TPGS1-202ENST00000588278 PRSS2P07478 247 aa11.62□□□□□ -0.55
TPGS1-202ENST00000588278 RNASE3P12724 160 aaKnown RBP11.62□□□□□ -0.55
TPGS1-202ENST00000588278 ZNF56Q15929 161 aa11.62□□□□□ -0.55
TPGS1-202ENST00000588278 CHD6Q8TD26 2715 aa11.62□□□□□ -0.55
TPGS1-202ENST00000588278 OR10J6PQ8NGY7 276 aa11.61□□□□□ -0.55
TPGS1-202ENST00000588278 CLEC2BQ92478 149 aa11.61□□□□□ -0.55
TPGS1-202ENST00000588278 FAM110AQ9BQ89 295 aa11.61□□□□□ -0.55
TPGS1-202ENST00000588278 NAV2Q8IVL1 2488 aa11.61□□□□□ -0.55
TPGS1-202ENST00000588278 NOTCH2Q04721 2471 aa11.61□□□□□ -0.55
TPGS1-202ENST00000588278 ZNF469Q96JG9 3925 aaPredicted RBP11.6□□□□□ -0.55
TPGS1-202ENST00000588278 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
TPGS1-202ENST00000588278 C10orf99Q6UWK7 81 aa11.6□□□□□ -0.55
TPGS1-202ENST00000588278 SDHAF1A6NFY7 115 aa11.6□□□□□ -0.55
TPGS1-202ENST00000588278 AVPP01185 164 aa11.6□□□□□ -0.55
TPGS1-202ENST00000588278 H3BMM0 161 aa11.59□□□□□ -0.55
TPGS1-202ENST00000588278 RNASE13Q5GAN3 156 aaKnown RBP11.59□□□□□ -0.55
TPGS1-202ENST00000588278 C2orf82Q6UX34 121 aa11.59□□□□□ -0.55
TPGS1-202ENST00000588278 UBE2WQ96B02 151 aa11.59□□□□□ -0.55
TPGS1-202ENST00000588278 RHPN1-AS1Q9BWJ2 59 aa11.59□□□□□ -0.55
TPGS1-202ENST00000588278 PRORYQ9H606 182 aa11.59□□□□□ -0.55
TPGS1-202ENST00000588278 TRAV21A0A0B4J279 112 aa11.59□□□□□ -0.55
TPGS1-202ENST00000588278 A8MZ25 164 aa11.59□□□□□ -0.55
TPGS1-202ENST00000588278 ATXN8Q156A1 80 aa11.59□□□□□ -0.55
TPGS1-202ENST00000588278 A0A0J9YXV3 536 aa11.58□□□□□ -0.56
TPGS1-202ENST00000588278 ZNF876PQ49A33 203 aa11.58□□□□□ -0.56
TPGS1-202ENST00000588278 FAM223BA6NKX1 122 aa11.58□□□□□ -0.56
TPGS1-202ENST00000588278 LINC00315P59091 139 aa11.58□□□□□ -0.56
TPGS1-202ENST00000588278 FAM223AQ8IWN6 122 aa11.58□□□□□ -0.56
TPGS1-202ENST00000588278 MXRA5Q9NR99 2828 aa11.58□□□□□ -0.56
TPGS1-202ENST00000588278 PRB1P04280 392 aa11.57□□□□□ -0.56
TPGS1-202ENST00000588278 ZNF22P17026 224 aaPredicted RBP11.57□□□□□ -0.56
TPGS1-202ENST00000588278 C10orf105Q8TEF2 133 aa11.57□□□□□ -0.56
TPGS1-202ENST00000588278 SPXQ9BT56 116 aa11.57□□□□□ -0.56
TPGS1-202ENST00000588278 TRAV8-3A0A0A6YYJ7 113 aa11.57□□□□□ -0.56
TPGS1-202ENST00000588278 C9orf139Q6ZV77 190 aa11.57□□□□□ -0.56
TPGS1-202ENST00000588278 PPDPFQ9H3Y8 114 aa11.57□□□□□ -0.56
TPGS1-202ENST00000588278 DUX5Q96PT3 197 aa11.57□□□□□ -0.56
TPGS1-202ENST00000588278 U3KQE9 123 aa11.56□□□□□ -0.56
TPGS1-202ENST00000588278 H7C423 109 aa11.56□□□□□ -0.56
TPGS1-202ENST00000588278 LGALS9O00182 355 aa11.56□□□□□ -0.56
TPGS1-202ENST00000588278 MSMBP08118 114 aa11.56□□□□□ -0.56
TPGS1-202ENST00000588278 LINC00477Q96M19 166 aa11.56□□□□□ -0.56
TPGS1-202ENST00000588278 POLR2KP53803 58 aaKnown RBP11.55□□□□□ -0.56
TPGS1-202ENST00000588278 PAPPA-AS1Q5QFB9 102 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms