RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 KCNRGQ8N5I3 272 aa11.05□□□□□ -0.64
TMED1-203ENST00000588259 CIRBP-AS1Q8TBR5 109 aa11.05□□□□□ -0.64
TMED1-203ENST00000588259 USP17L23D6RBM5 183 aa11.04□□□□□ -0.64
TMED1-203ENST00000588259 MBD3L1Q8WWY6 194 aa11.04□□□□□ -0.64
TMED1-203ENST00000588259 AP1S3Q96PC3 154 aa11.04□□□□□ -0.64
TMED1-203ENST00000588259 TPPP3Q9BW30 176 aa11.04□□□□□ -0.64
TMED1-203ENST00000588259 KANTRA0A1W2PQU2 76 aa11.03□□□□□ -0.64
TMED1-203ENST00000588259 KRTAP29-1A8MX34 341 aaPredicted RBP11.03□□□□□ -0.64
TMED1-203ENST00000588259 SNAI2O43623 268 aa11.03□□□□□ -0.64
TMED1-203ENST00000588259 MGPP08493 103 aa11.03□□□□□ -0.64
TMED1-203ENST00000588259 H2AFB1P0C5Y9 115 aa11.03□□□□□ -0.64
TMED1-203ENST00000588259 OR5AL1P0C617 328 aa11.03□□□□□ -0.64
TMED1-203ENST00000588259 ZNF345Q14585 488 aa11.03□□□□□ -0.64
TMED1-203ENST00000588259 IGLV2-8P01709 118 aa11.02□□□□□ -0.65
TMED1-203ENST00000588259 GAGE6Q13070 117 aa11.02□□□□□ -0.65
TMED1-203ENST00000588259 TMEM97Q5BJF2 176 aa11.02□□□□□ -0.65
TMED1-203ENST00000588259 TMUB2Q71RG4 321 aa11.02□□□□□ -0.65
TMED1-203ENST00000588259 DERL1Q9BUN8 251 aa11.02□□□□□ -0.65
TMED1-203ENST00000588259 MLST8Q9BVC4 326 aa11.02□□□□□ -0.65
TMED1-203ENST00000588259 TRBV25-1A0A075B6N4 114 aa11.01□□□□□ -0.65
TMED1-203ENST00000588259 BCL2L11O43521 198 aa11.01□□□□□ -0.65
TMED1-203ENST00000588259 RPL35P42766 123 aaKnown RBP11.01□□□□□ -0.65
TMED1-203ENST00000588259 MIAQ16674 131 aa11.01□□□□□ -0.65
TMED1-203ENST00000588259 GNG13Q9P2W3 67 aa11.01□□□□□ -0.65
TMED1-203ENST00000588259 A0A0D9SG52 128 aa11□□□□□ -0.65
TMED1-203ENST00000588259 NTM-AS1Q6ZSK4 140 aa11□□□□□ -0.65
TMED1-203ENST00000588259 SSBP4Q9BWG4 385 aaPredicted RBP11□□□□□ -0.65
TMED1-203ENST00000588259 GZMBP10144 247 aa10.99□□□□□ -0.65
TMED1-203ENST00000588259 RBX1P62877 108 aa10.99□□□□□ -0.65
TMED1-203ENST00000588259 EIF5AP63241 154 aaKnown RBP10.99□□□□□ -0.65
TMED1-203ENST00000588259 LINC00269Q8N2A0 174 aa10.99□□□□□ -0.65
TMED1-203ENST00000588259 DAZAP1Q96EP5 407 aaKnown RBP10.99□□□□□ -0.65
TMED1-203ENST00000588259 PRSS1P07477 247 aa10.98□□□□□ -0.65
TMED1-203ENST00000588259 CENPWQ5EE01 88 aa10.98□□□□□ -0.65
TMED1-203ENST00000588259 FER1L6-AS1Q8NA97 138 aa10.98□□□□□ -0.65
TMED1-203ENST00000588259 OR2D3Q8NGH3 330 aa10.98□□□□□ -0.65
TMED1-203ENST00000588259 MANBALQ9NQG1 85 aa10.98□□□□□ -0.65
TMED1-203ENST00000588259 VAX2Q9UIW0 290 aa10.98□□□□□ -0.65
TMED1-203ENST00000588259 IGHV1-24A0A0C4DH33 117 aa10.97□□□□□ -0.65
TMED1-203ENST00000588259 HMSDA8MTL9 139 aa10.97□□□□□ -0.65
TMED1-203ENST00000588259 H7C1H1 209 aa10.97□□□□□ -0.65
TMED1-203ENST00000588259 RPL37AP61513 92 aaKnown RBP10.97□□□□□ -0.65
TMED1-203ENST00000588259 KIF25-AS1Q9Y6Z4 181 aa10.97□□□□□ -0.65
TMED1-203ENST00000588259 IGLV10-54A0A075B6I4 117 aa10.96□□□□□ -0.65
TMED1-203ENST00000588259 KRTAP10-4P60372 401 aaPredicted RBP10.96□□□□□ -0.65
TMED1-203ENST00000588259 RPS20P60866 119 aaKnown RBP10.96□□□□□ -0.65
TMED1-203ENST00000588259 NKX2-5P52952 324 aaPredicted RBP10.95□□□□□ -0.66
TMED1-203ENST00000588259 CCL20P78556 96 aa10.95□□□□□ -0.66
TMED1-203ENST00000588259 SUMO4Q6EEV6 95 aa10.95□□□□□ -0.66
TMED1-203ENST00000588259 C11orf52Q96A22 123 aa10.95□□□□□ -0.66
TMED1-203ENST00000588259 PRR34Q9NV39 138 aa10.95□□□□□ -0.66
TMED1-203ENST00000588259 M0QY20 66 aa10.94□□□□□ -0.66
TMED1-203ENST00000588259 GNG4P50150 75 aa10.94□□□□□ -0.66
TMED1-203ENST00000588259 CACNG7P62955 275 aa10.94□□□□□ -0.66
TMED1-203ENST00000588259 REG3AQ06141 175 aa10.94□□□□□ -0.66
TMED1-203ENST00000588259 IQCJQ1A5X6 159 aa10.94□□□□□ -0.66
TMED1-203ENST00000588259 DGAT2L7PQ6IED9 249 aa10.94□□□□□ -0.66
TMED1-203ENST00000588259 TMEM243Q9BU79 118 aa10.94□□□□□ -0.66
TMED1-203ENST00000588259 XKRY2A2RUG3 117 aa10.93□□□□□ -0.66
TMED1-203ENST00000588259 RAB19A4D1S5 217 aa10.93□□□□□ -0.66
TMED1-203ENST00000588259 TEX46H3BTG2 121 aa10.93□□□□□ -0.66
TMED1-203ENST00000588259 P01737 135 aa10.93□□□□□ -0.66
TMED1-203ENST00000588259 hDV102S1A0JD36 115 aa10.92□□□□□ -0.66
TMED1-203ENST00000588259 OXTP01178 125 aa10.92□□□□□ -0.66
TMED1-203ENST00000588259 IGLC6P0CF74 106 aa10.92□□□□□ -0.66
TMED1-203ENST00000588259 C9orf163Q8N9P6 203 aa10.92□□□□□ -0.66
TMED1-203ENST00000588259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.92□□□□□ -0.66
TMED1-203ENST00000588259 UBE2L6O14933 153 aa10.91□□□□□ -0.66
TMED1-203ENST00000588259 IFNA1P01562 189 aa10.91□□□□□ -0.66
TMED1-203ENST00000588259 TRGC1P0CF51 173 aa10.91□□□□□ -0.66
TMED1-203ENST00000588259 RAB5CP51148 216 aa10.91□□□□□ -0.66
TMED1-203ENST00000588259 SERTAD4-AS1Q5TG53 156 aa10.91□□□□□ -0.66
TMED1-203ENST00000588259 KRTAP26-1Q6PEX3 210 aa10.91□□□□□ -0.66
TMED1-203ENST00000588259 RASL11AQ6T310 242 aa10.91□□□□□ -0.66
TMED1-203ENST00000588259 EIF5AL1Q6IS14 154 aaKnown RBP10.9□□□□□ -0.66
TMED1-203ENST00000588259 CLRN3Q8NCR9 226 aa10.9□□□□□ -0.66
TMED1-203ENST00000588259 DPH3Q96FX2 82 aa10.9□□□□□ -0.66
TMED1-203ENST00000588259 AP5S1Q9NUS5 200 aa10.9□□□□□ -0.66
TMED1-203ENST00000588259 MED9Q9NWA0 146 aa10.9□□□□□ -0.66
TMED1-203ENST00000588259 TRAV1-1A0A0B4J248 108 aa10.89□□□□□ -0.67
TMED1-203ENST00000588259 C19orf71A6NCJ1 209 aa10.89□□□□□ -0.67
TMED1-203ENST00000588259 F2Z2F3 143 aa10.89□□□□□ -0.67
TMED1-203ENST00000588259 SULT1A2P50226 295 aa10.89□□□□□ -0.67
TMED1-203ENST00000588259 MEF2BQ02080 365 aaPredicted RBP10.89□□□□□ -0.67
TMED1-203ENST00000588259 LYZL1Q6UWQ5 148 aa10.89□□□□□ -0.67
TMED1-203ENST00000588259 C20orf203Q8NBC4 194 aa10.89□□□□□ -0.67
TMED1-203ENST00000588259 DPH3P1Q9H4G8 78 aa10.89□□□□□ -0.67
TMED1-203ENST00000588259 IGLV4-60A0A075B6I1 120 aa10.88□□□□□ -0.67
TMED1-203ENST00000588259 TRAV8-4A0A0B4J246 113 aa10.88□□□□□ -0.67
TMED1-203ENST00000588259 PANO1I0J062 215 aa10.88□□□□□ -0.67
TMED1-203ENST00000588259 PDE6DO43924 150 aa10.88□□□□□ -0.67
TMED1-203ENST00000588259 AMTP48728 403 aa10.88□□□□□ -0.67
TMED1-203ENST00000588259 COTL1Q14019 142 aa10.88□□□□□ -0.67
TMED1-203ENST00000588259 WDR73Q6P4I2 378 aa10.88□□□□□ -0.67
TMED1-203ENST00000588259 SMIM12Q96EX1 92 aa10.88□□□□□ -0.67
TMED1-203ENST00000588259 BIN3Q9NQY0 253 aa10.88□□□□□ -0.67
TMED1-203ENST00000588259 IGKV3OR2-268A0A0C4DH90 116 aa10.87□□□□□ -0.67
TMED1-203ENST00000588259 NTF3P20783 257 aa10.87□□□□□ -0.67
TMED1-203ENST00000588259 SDIM1Q6ZPB5 146 aa10.87□□□□□ -0.67
TMED1-203ENST00000588259 GFRA4Q9GZZ7 299 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms