RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 HOXA5P20719 270 aa7.98□□□□□ -1.13
VMP1-207ENST00000588131 NDUFA6P56556 154 aa7.98□□□□□ -1.13
VMP1-207ENST00000588131 OR10J3Q5JRS4 329 aa7.98□□□□□ -1.13
VMP1-207ENST00000588131 TRGV4A0A0C4DH28 118 aa7.97□□□□□ -1.13
VMP1-207ENST00000588131 LOC389332A0A1B0GUA5 103 aa7.97□□□□□ -1.13
VMP1-207ENST00000588131 CIDEAO60543 219 aa7.97□□□□□ -1.13
VMP1-207ENST00000588131 LINC00310P59036 64 aa7.97□□□□□ -1.13
VMP1-207ENST00000588131 Q0VG73 95 aa7.97□□□□□ -1.13
VMP1-207ENST00000588131 SLC25A29Q8N8R3 303 aa7.97□□□□□ -1.13
VMP1-207ENST00000588131 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
VMP1-207ENST00000588131 LAMTOR2Q9Y2Q5 125 aa7.97□□□□□ -1.13
VMP1-207ENST00000588131 LOC100996750A0A140TA64 210 aa7.96□□□□□ -1.14
VMP1-207ENST00000588131 H7C1H1 209 aa7.96□□□□□ -1.14
VMP1-207ENST00000588131 K7EQD1 137 aa7.96□□□□□ -1.14
VMP1-207ENST00000588131 ATP5G1P05496 136 aa7.96□□□□□ -1.14
VMP1-207ENST00000588131 NANOS2P60321 138 aaKnown RBP7.96□□□□□ -1.14
VMP1-207ENST00000588131 NEXN-AS1Q8NBZ9 246 aa7.96□□□□□ -1.14
VMP1-207ENST00000588131 KRTAP4-6Q9BYQ5 205 aa7.96□□□□□ -1.14
VMP1-207ENST00000588131 MAP1LC3AQ9H492 121 aa7.96□□□□□ -1.14
VMP1-207ENST00000588131 NIT2Q9NQR4 276 aa7.96□□□□□ -1.14
VMP1-207ENST00000588131 NBEAL2Q6ZNJ1 2754 aa7.96□□□□□ -1.14
VMP1-207ENST00000588131 TRBV6-5A0A0K0K1A5 114 aa7.95□□□□□ -1.14
VMP1-207ENST00000588131 LOC100131303A0A0U1RQF7 123 aa7.95□□□□□ -1.14
VMP1-207ENST00000588131 PRSS47A8MTI9 375 aa7.95□□□□□ -1.14
VMP1-207ENST00000588131 NUPR1O60356 82 aa7.95□□□□□ -1.14
VMP1-207ENST00000588131 HTN3P15516 51 aa7.95□□□□□ -1.14
VMP1-207ENST00000588131 IFI27P40305 119 aaPredicted RBP7.95□□□□□ -1.14
VMP1-207ENST00000588131 SUMO2P61956 95 aaKnown RBP7.95□□□□□ -1.14
VMP1-207ENST00000588131 COA6Q5JTJ3 125 aaKnown RBP7.95□□□□□ -1.14
VMP1-207ENST00000588131 Q6ZTC4 211 aa7.95□□□□□ -1.14
VMP1-207ENST00000588131 NEGR1Q7Z3B1 354 aa7.95□□□□□ -1.14
VMP1-207ENST00000588131 BAGE3Q86Y29 109 aa7.95□□□□□ -1.14
VMP1-207ENST00000588131 C11orf45Q8TAV5 145 aa7.95□□□□□ -1.14
VMP1-207ENST00000588131 ST20Q9HBF5 79 aa7.95□□□□□ -1.14
VMP1-207ENST00000588131 PRKDCP78527 4128 aaKnown RBP7.94□□□□□ -1.14
VMP1-207ENST00000588131 IGLV2-18A0A075B6J9 118 aa7.94□□□□□ -1.14
VMP1-207ENST00000588131 TRBV6-4A0A1B0GX49 114 aa7.94□□□□□ -1.14
VMP1-207ENST00000588131 SERF1AO75920 110 aa7.94□□□□□ -1.14
VMP1-207ENST00000588131 PPP1R17O96001 155 aa7.94□□□□□ -1.14
VMP1-207ENST00000588131 NHLRC4P0CG21 123 aaPredicted RBP7.94□□□□□ -1.14
VMP1-207ENST00000588131 CRYBA4P53673 196 aa7.94□□□□□ -1.14
VMP1-207ENST00000588131 NIT1Q86X76 327 aa7.94□□□□□ -1.14
VMP1-207ENST00000588131 C20orf78Q9BR46 151 aa7.94□□□□□ -1.14
VMP1-207ENST00000588131 SMIM2Q9BVW6 85 aa7.94□□□□□ -1.14
VMP1-207ENST00000588131 HHLA3Q9XRX5 114 aa7.94□□□□□ -1.14
VMP1-207ENST00000588131 TENM3Q9P273 2699 aa7.94□□□□□ -1.14
VMP1-207ENST00000588131 TRBV10-1A0A0K0K1A3 114 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 GAGE12JA6NER3 117 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 SDHAF1A6NFY7 115 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 F5H768 121 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 S100A6P06703 90 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 POLR2KP53803 58 aaKnown RBP7.93□□□□□ -1.14
VMP1-207ENST00000588131 SNRPEP62304 92 aaKnown RBP7.93□□□□□ -1.14
VMP1-207ENST00000588131 GAGE1Q13065 139 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 GAGE4Q13068 117 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 GAGE5Q13069 117 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 RHOHQ15669 191 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 GAGE13Q4V321 117 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 RNASEKQ6P5S7 137 aaKnown RBP7.93□□□□□ -1.14
VMP1-207ENST00000588131 Q8N8P6 123 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 PRSS3P2Q8NHM4 247 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 DEFB104AQ8WTQ1 72 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 VSIG2Q96IQ7 327 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 DNAJC30Q96LL9 226 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 TMEM70Q9BUB7 260 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 PRO0255Q9UI72 69 aa7.93□□□□□ -1.14
VMP1-207ENST00000588131 A0A0J9YY99 117 aa7.92□□□□□ -1.14
VMP1-207ENST00000588131 C5orf52A6NGY3 159 aa7.92□□□□□ -1.14
VMP1-207ENST00000588131 LINC00614P0C842 121 aa7.92□□□□□ -1.14
VMP1-207ENST00000588131 RPL32P62910 135 aaKnown RBP7.92□□□□□ -1.14
VMP1-207ENST00000588131 FA2HQ7L5A8 372 aa7.92□□□□□ -1.14
VMP1-207ENST00000588131 ZNRF2Q8NHG8 242 aa7.92□□□□□ -1.14
VMP1-207ENST00000588131 PRADC1Q9BSG0 188 aa7.92□□□□□ -1.14
VMP1-207ENST00000588131 TNFRSF18Q9Y5U5 241 aa7.92□□□□□ -1.14
VMP1-207ENST00000588131 TRAV26-1A0A087WT03 109 aa7.91□□□□□ -1.14
VMP1-207ENST00000588131 IGHV3-38A0A0C4DH36 116 aa7.91□□□□□ -1.14
VMP1-207ENST00000588131 TCAPO15273 167 aa7.91□□□□□ -1.14
VMP1-207ENST00000588131 PAX4O43316 350 aa7.91□□□□□ -1.14
VMP1-207ENST00000588131 LINC00694P0DN24 101 aa7.91□□□□□ -1.14
VMP1-207ENST00000588131 PMCHP20382 165 aa7.91□□□□□ -1.14
VMP1-207ENST00000588131 RPL36AP83881 106 aaKnown RBP7.91□□□□□ -1.14
VMP1-207ENST00000588131 PDZD11Q5EBL8 140 aa7.91□□□□□ -1.14
VMP1-207ENST00000588131 PHLDA1Q8WV24 401 aaPredicted RBP7.91□□□□□ -1.14
VMP1-207ENST00000588131 RPL36ALQ969Q0 106 aaKnown RBP7.91□□□□□ -1.14
VMP1-207ENST00000588131 NXT2Q9NPJ8 142 aaKnown RBP7.91□□□□□ -1.14
VMP1-207ENST00000588131 TRBV7-3A0A075B6L6 115 aa7.9□□□□□ -1.14
VMP1-207ENST00000588131 TRBV27A0A0K0K1C4 114 aa7.9□□□□□ -1.14
VMP1-207ENST00000588131 LINC01546A6NGU7 62 aa7.9□□□□□ -1.14
VMP1-207ENST00000588131 VCYO14598 125 aa7.9□□□□□ -1.14
VMP1-207ENST00000588131 ESDP10768 282 aa7.9□□□□□ -1.14
VMP1-207ENST00000588131 GYPEP15421 78 aa7.9□□□□□ -1.14
VMP1-207ENST00000588131 UBE2D3P61077 147 aa7.9□□□□□ -1.14
VMP1-207ENST00000588131 UBE2D2P62837 147 aa7.9□□□□□ -1.14
VMP1-207ENST00000588131 PMCHL1Q16048 86 aa7.9□□□□□ -1.14
VMP1-207ENST00000588131 HIST3H2BBQ8N257 126 aa7.9□□□□□ -1.14
VMP1-207ENST00000588131 CHCHD1Q96BP2 118 aaKnown RBP7.9□□□□□ -1.14
VMP1-207ENST00000588131 DEFB131BA0A096LNP1 70 aa7.89□□□□□ -1.15
VMP1-207ENST00000588131 I3L3M4 83 aa7.89□□□□□ -1.15
VMP1-207ENST00000588131 HSBP1O75506 76 aa7.89□□□□□ -1.15
VMP1-207ENST00000588131 TSHBP01222 138 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms