RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 SMAD5-AS1Q9Y6J3 95 aa7.31□□□□□ -1.24
LINC01539-201ENST00000587904 SVEP1Q4LDE5 3571 aa7.31□□□□□ -1.24
LINC01539-201ENST00000587904 ZNF785A8K8V0 405 aa7.31□□□□□ -1.24
LINC01539-201ENST00000587904 MALP21145 153 aa7.31□□□□□ -1.24
LINC01539-201ENST00000587904 SEC61GP60059 68 aa7.31□□□□□ -1.24
LINC01539-201ENST00000587904 PMVKQ15126 192 aa7.31□□□□□ -1.24
LINC01539-201ENST00000587904 GAGE2AQ6NT46 116 aa7.31□□□□□ -1.24
LINC01539-201ENST00000587904 POM121L12Q8N7R1 296 aa7.31□□□□□ -1.24
LINC01539-201ENST00000587904 DOPEY2Q9Y3R5 2298 aa7.3□□□□□ -1.24
LINC01539-201ENST00000587904 M0R3E3 92 aa7.3□□□□□ -1.24
LINC01539-201ENST00000587904 LGALS9O00182 355 aa7.3□□□□□ -1.24
LINC01539-201ENST00000587904 COX8CQ7Z4L0 72 aa7.3□□□□□ -1.24
LINC01539-201ENST00000587904 IGHV3OR16-8A0A075B7F1 116 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 LOC389332A0A1B0GUA5 103 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 RBAKDNA6NC62 111 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 D6R8Y8 96 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 PRSS1P07477 247 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 PSMB8P28062 276 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 Q6ZS46 218 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 AMN1Q8IY45 258 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 TMEM86BQ8N661 226 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 CELSR1Q9NYQ6 3014 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 ZANQ9Y493 2812 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 RS1O15537 224 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 ARMS2P0C7Q2 107 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 HLA-DMBP28068 263 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 TMEM258P61165 79 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 FAM104BQ5XKR9 115 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 KLK15Q9H2R5 256 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 CSMD2Q7Z408 3487 aa7.29□□□□□ -1.24
LINC01539-201ENST00000587904 NOTCH2Q04721 2471 aa7.28□□□□□ -1.24
LINC01539-201ENST00000587904 CSPG4Q6UVK1 2322 aa7.28□□□□□ -1.24
LINC01539-201ENST00000587904 ELANEP08246 267 aa7.28□□□□□ -1.24
LINC01539-201ENST00000587904 COX7CP15954 63 aa7.28□□□□□ -1.24
LINC01539-201ENST00000587904 PLNP26678 52 aa7.28□□□□□ -1.24
LINC01539-201ENST00000587904 NTN5Q8WTR8 489 aaPredicted RBP7.28□□□□□ -1.24
LINC01539-201ENST00000587904 FOXC2Q99958 501 aa7.28□□□□□ -1.24
LINC01539-201ENST00000587904 Q5XG85 94 aa7.28□□□□□ -1.24
LINC01539-201ENST00000587904 NDUFA11Q86Y39 141 aa7.28□□□□□ -1.24
LINC01539-201ENST00000587904 DPH3Q96FX2 82 aa7.28□□□□□ -1.24
LINC01539-201ENST00000587904 ZNF702PQ9H963 129 aa7.28□□□□□ -1.24
LINC01539-201ENST00000587904 FAM236AA0A1B0GUQ0 79 aa7.27□□□□□ -1.25
LINC01539-201ENST00000587904 FAM236BA0A1B0GV22 79 aa7.27□□□□□ -1.25
LINC01539-201ENST00000587904 TINCRA0A1B0GVN0 87 aa7.27□□□□□ -1.25
LINC01539-201ENST00000587904 K7EMT4 169 aa7.27□□□□□ -1.25
LINC01539-201ENST00000587904 TRBV12-3P01733 135 aa7.27□□□□□ -1.25
LINC01539-201ENST00000587904 IGHV3-11P01762 117 aa7.27□□□□□ -1.25
LINC01539-201ENST00000587904 P0DMU3 169 aa7.27□□□□□ -1.25
LINC01539-201ENST00000587904 FAM231AP0DMU4 169 aa7.27□□□□□ -1.25
LINC01539-201ENST00000587904 FAM231CP0DMU5 169 aa7.27□□□□□ -1.25
LINC01539-201ENST00000587904 Q8N2B8 174 aa7.27□□□□□ -1.25
LINC01539-201ENST00000587904 WFDC11Q8NEX6 87 aa7.27□□□□□ -1.25
LINC01539-201ENST00000587904 DAZ1Q9NQZ3 744 aaKnown RBP7.27□□□□□ -1.25
LINC01539-201ENST00000587904 ITPR3Q14573 2671 aa7.27□□□□□ -1.25
LINC01539-201ENST00000587904 IGKV2-40A0A087WW87 121 aaPredicted RBP7.26□□□□□ -1.25
LINC01539-201ENST00000587904 H3BMM0 161 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 OVOL1O14753 267 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 IGKV2D-40P01614 121 aaPredicted RBP7.26□□□□□ -1.25
LINC01539-201ENST00000587904 DEFB121Q5J5C9 76 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 TMEM170BQ5T4T1 132 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 UNQ9165/PRO28630Q6UXU0 137 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 GPHB5Q86YW7 130 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 RNF152Q8N8N0 203 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 UBE2WQ96B02 151 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 PRR25Q96S07 402 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 NXT2Q9NPJ8 142 aaKnown RBP7.26□□□□□ -1.25
LINC01539-201ENST00000587904 AGRNO00468 2067 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 CSMD1Q96PZ7 3565 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 IGHV3-66A0A0C4DH42 116 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 C4orf26Q17RF5 130 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 HRCT1Q6UXD1 115 aa7.26□□□□□ -1.25
LINC01539-201ENST00000587904 MYO9AB2RTY4 2548 aa7.25□□□□□ -1.25
LINC01539-201ENST00000587904 IGHV7-4-1A0A0J9YVY3 117 aa7.25□□□□□ -1.25
LINC01539-201ENST00000587904 TRACP01848 142 aa7.25□□□□□ -1.25
LINC01539-201ENST00000587904 SRSF2Q01130 221 aaKnown RBP7.25□□□□□ -1.25
LINC01539-201ENST00000587904 Q71RC1 249 aaPredicted RBP7.25□□□□□ -1.25
LINC01539-201ENST00000587904 TMEM160Q9NX00 188 aa7.25□□□□□ -1.25
LINC01539-201ENST00000587904 KLK5Q9Y337 293 aaPredicted RBP7.25□□□□□ -1.25
LINC01539-201ENST00000587904 TRGV11A0A075B6L2 103 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 IGHV3-49A0A0A0MS15 119 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 TRBV10-2A0A0K0K1G8 114 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 ACYP1P07311 99 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 LEPP41159 167 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 ZNF56Q15929 161 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 MRPL51Q4U2R6 128 aaKnown RBP7.24□□□□□ -1.25
LINC01539-201ENST00000587904 C16orf92Q96LL3 132 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 MXRA5Q9NR99 2828 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 ITPR2Q14571 2701 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 IGHV3OR16-13A0A075B7E8 117 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 IGHV3-74A0A0B4J1X5 117 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 FXYD7P58549 80 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 ATXN8Q156A1 80 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 HIST2H2BCQ6DN03 193 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 UBE2E2Q96LR5 201 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 C8orf49Q96NF6 230 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 JPT2Q9H910 190 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 MRPL35Q9NZE8 188 aaKnown RBP7.24□□□□□ -1.25
LINC01539-201ENST00000587904 LENEPQ9Y5L5 61 aa7.24□□□□□ -1.25
LINC01539-201ENST00000587904 TRAV12-1A0A0B4J245 112 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms