RNA–Protein interactions for RNA: ENST00000587760.5

NFIX-209, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-209ENST00000587760 IGHV3-53P01767 116 aa12.23□□□□□ -0.45
NFIX-209ENST00000587760 PRM2P04554 102 aa12.23□□□□□ -0.45
NFIX-209ENST00000587760 SPATA3Q8NHX4 192 aa12.23□□□□□ -0.45
NFIX-209ENST00000587760 TOMM6Q96B49 74 aa12.23□□□□□ -0.45
NFIX-209ENST00000587760 OVOL2Q9BRP0 275 aa12.23□□□□□ -0.45
NFIX-209ENST00000587760 TRAV4A0A0B4J268 109 aa12.22□□□□□ -0.45
NFIX-209ENST00000587760 CYSRT1A8MQ03 144 aa12.22□□□□□ -0.45
NFIX-209ENST00000587760 RHOHQ15669 191 aa12.22□□□□□ -0.45
NFIX-209ENST00000587760 OR4C5Q8NGB2 326 aa12.22□□□□□ -0.45
NFIX-209ENST00000587760 I3L3M4 83 aa12.21□□□□□ -0.45
NFIX-209ENST00000587760 CYSLTR1Q9Y271 337 aa12.21□□□□□ -0.45
NFIX-209ENST00000587760 PAM16Q9Y3D7 125 aa12.21□□□□□ -0.45
NFIX-209ENST00000587760 TNFRSF18Q9Y5U5 241 aa12.21□□□□□ -0.45
NFIX-209ENST00000587760 ATRQ13535 2644 aa12.21□□□□□ -0.45
NFIX-209ENST00000587760 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.21□□□□□ -0.46
NFIX-209ENST00000587760 PRIMA1Q86XR5 153 aa12.21□□□□□ -0.46
NFIX-209ENST00000587760 PRO1933Q9H354 126 aa12.21□□□□□ -0.46
NFIX-209ENST00000587760 H0Y8G0 127 aa12.2□□□□□ -0.46
NFIX-209ENST00000587760 PRSS1P07477 247 aa12.2□□□□□ -0.46
NFIX-209ENST00000587760 DDTP30046 118 aa12.2□□□□□ -0.46
NFIX-209ENST00000587760 RIPPLY3P57055 190 aa12.2□□□□□ -0.46
NFIX-209ENST00000587760 SPATA45Q537H7 98 aa12.2□□□□□ -0.46
NFIX-209ENST00000587760 C2orf66Q6UXQ4 117 aa12.2□□□□□ -0.46
NFIX-209ENST00000587760 C18orf15Q96N68 181 aa12.2□□□□□ -0.46
NFIX-209ENST00000587760 NOP10Q9NPE3 64 aaKnown RBP12.2□□□□□ -0.46
NFIX-209ENST00000587760 Q6ZN92 141 aa12.19□□□□□ -0.46
NFIX-209ENST00000587760 SCGB3A1Q96QR1 104 aa12.19□□□□□ -0.46
NFIX-209ENST00000587760 IGHV3-73A0A0B4J1V6 119 aa12.18□□□□□ -0.46
NFIX-209ENST00000587760 TRBV10-1A0A0K0K1A3 114 aa12.18□□□□□ -0.46
NFIX-209ENST00000587760 ERASQ7Z444 233 aa12.18□□□□□ -0.46
NFIX-209ENST00000587760 PLAC8L1A1L4L8 177 aa12.17□□□□□ -0.46
NFIX-209ENST00000587760 Q6ZTI0 123 aa12.17□□□□□ -0.46
NFIX-209ENST00000587760 ATOH7Q8N100 152 aa12.17□□□□□ -0.46
NFIX-209ENST00000587760 TRGV2A0A075B6R0 118 aa12.16□□□□□ -0.46
NFIX-209ENST00000587760 TRAV12-1A0A0B4J245 112 aa12.16□□□□□ -0.46
NFIX-209ENST00000587760 TMEM141Q96I45 108 aa12.16□□□□□ -0.46
NFIX-209ENST00000587760 MIEN1Q9BRT3 115 aa12.15□□□□□ -0.46
NFIX-209ENST00000587760 ODF1Q14990 250 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 NEGR1Q7Z3B1 354 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 TIMM17AQ99595 171 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 ZMAT4Q9H898 229 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 UQCR10Q9UDW1 63 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 A0A087WX48 190 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 GAGE12BA1L429 117 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 LINC00587B1AMM8 73 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 GAGE7O76087 117 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 TSHBP01222 138 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 GAGE12FP0CL80 117 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 GAGE12GP0CL81 117 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 GAGE12IP0CL82 117 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 RPL36AP83881 106 aaKnown RBP12.14□□□□□ -0.47
NFIX-209ENST00000587760 EGFEM1PQ0D2K5 195 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 RPL36ALQ969Q0 106 aaKnown RBP12.14□□□□□ -0.47
NFIX-209ENST00000587760 TP53TG1Q9Y2A0 90 aa12.14□□□□□ -0.47
NFIX-209ENST00000587760 NIPBLQ6KC79 2804 aaeCLIP12.13□□□□□ -0.47
NFIX-209ENST00000587760 K7EQD1 137 aa12.13□□□□□ -0.47
NFIX-209ENST00000587760 DEFA6Q01524 100 aa12.13□□□□□ -0.47
NFIX-209ENST00000587760 Q6ZSN1 163 aa12.13□□□□□ -0.47
NFIX-209ENST00000587760 ZNF479Q96JC4 524 aa12.13□□□□□ -0.47
NFIX-209ENST00000587760 TENM1Q9UKZ4 2725 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 NOTCH3Q9UM47 2321 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 NACAE9PAV3 2078 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 TRBV7-3A0A075B6L6 115 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 TRBV6-4A0A1B0GX49 114 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 LYRM9A8MSI8 78 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 DPM2O94777 84 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 NPSP0C0P6 89 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 IGLC3P0DOY3 106 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 IGHV4-30-4P0DP06 118 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 PAPPA-AS1Q5QFB9 102 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 C20orf203Q8NBC4 194 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 X6R8D5 127 aa12.12□□□□□ -0.47
NFIX-209ENST00000587760 A8MZ25 164 aa12.11□□□□□ -0.47
NFIX-209ENST00000587760 MIFP14174 115 aa12.11□□□□□ -0.47
NFIX-209ENST00000587760 PLNP26678 52 aa12.11□□□□□ -0.47
NFIX-209ENST00000587760 COTL1Q14019 142 aa12.11□□□□□ -0.47
NFIX-209ENST00000587760 LINC00612Q8N6U2 182 aa12.11□□□□□ -0.47
NFIX-209ENST00000587760 PMCHL2Q9BQD1 86 aa12.11□□□□□ -0.47
NFIX-209ENST00000587760 IGKCP01834 107 aa12.1□□□□□ -0.47
NFIX-209ENST00000587760 P0DMU3 169 aa12.1□□□□□ -0.47
NFIX-209ENST00000587760 FAM231AP0DMU4 169 aa12.1□□□□□ -0.47
NFIX-209ENST00000587760 FAM231CP0DMU5 169 aa12.1□□□□□ -0.47
NFIX-209ENST00000587760 OXLD1Q5BKU9 147 aa12.1□□□□□ -0.47
NFIX-209ENST00000587760 DAZ4Q86SG3 579 aaKnown RBP12.1□□□□□ -0.47
NFIX-209ENST00000587760 DAZ3Q9NR90 486 aaKnown RBP12.1□□□□□ -0.47
NFIX-209ENST00000587760 TRGV4A0A0C4DH28 118 aa12.09□□□□□ -0.47
NFIX-209ENST00000587760 IGIPA6NJ69 53 aa12.09□□□□□ -0.47
NFIX-209ENST00000587760 F8VRH5 84 aa12.09□□□□□ -0.47
NFIX-209ENST00000587760 DEFB135Q30KP9 77 aa12.09□□□□□ -0.47
NFIX-209ENST00000587760 MRPL52Q86TS9 123 aaKnown RBP12.09□□□□□ -0.47
NFIX-209ENST00000587760 hDV102S1A0JD36 115 aa12.08□□□□□ -0.47
NFIX-209ENST00000587760 MAJINQ3KP22 176 aa12.08□□□□□ -0.47
NFIX-209ENST00000587760 OR11H2Q8NH07 326 aa12.08□□□□□ -0.47
NFIX-209ENST00000587760 BAALCQ8WXS3 180 aa12.08□□□□□ -0.47
NFIX-209ENST00000587760 RNF183Q96D59 192 aa12.08□□□□□ -0.47
NFIX-209ENST00000587760 PRADC1Q9BSG0 188 aa12.08□□□□□ -0.47
NFIX-209ENST00000587760 DKK2Q9UBU2 259 aa12.08□□□□□ -0.47
NFIX-209ENST00000587760 PYGO1Q9Y3Y4 419 aa12.08□□□□□ -0.47
NFIX-209ENST00000587760 CRYBA4P53673 196 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms