RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 F5H697 171 aa10.72□□□□□ -0.69
NCLN-203ENST00000587740 XGP55808 180 aa10.72□□□□□ -0.69
NCLN-203ENST00000587740 PNRC1Q12796 327 aaPredicted RBP10.72□□□□□ -0.69
NCLN-203ENST00000587740 CNFNQ9BYD5 112 aa10.72□□□□□ -0.69
NCLN-203ENST00000587740 SRRM2Q9UQ35 2752 aaKnown RBP10.71□□□□□ -0.69
NCLN-203ENST00000587740 LINC00862A6NCI5 91 aa10.71□□□□□ -0.69
NCLN-203ENST00000587740 HIGD1CA8MV81 97 aa10.71□□□□□ -0.69
NCLN-203ENST00000587740 LYPD5Q6UWN5 251 aa10.71□□□□□ -0.69
NCLN-203ENST00000587740 KIF25-AS1Q9Y6Z4 181 aa10.71□□□□□ -0.69
NCLN-203ENST00000587740 TMEM218A2RU14 115 aa10.7□□□□□ -0.7
NCLN-203ENST00000587740 GAGE12JA6NER3 117 aa10.7□□□□□ -0.7
NCLN-203ENST00000587740 F8W036 122 aa10.7□□□□□ -0.7
NCLN-203ENST00000587740 MGPP08493 103 aa10.7□□□□□ -0.7
NCLN-203ENST00000587740 FUSP35637 526 aaKnown RBP eCLIP10.7□□□□□ -0.7
NCLN-203ENST00000587740 GAGE1Q13065 139 aa10.7□□□□□ -0.7
NCLN-203ENST00000587740 GAGE4Q13068 117 aa10.7□□□□□ -0.7
NCLN-203ENST00000587740 GAGE5Q13069 117 aa10.7□□□□□ -0.7
NCLN-203ENST00000587740 GAGE13Q4V321 117 aa10.7□□□□□ -0.7
NCLN-203ENST00000587740 SMIM15Q7Z3B0 74 aa10.7□□□□□ -0.7
NCLN-203ENST00000587740 MRPS16Q9Y3D3 137 aaKnown RBP10.7□□□□□ -0.7
NCLN-203ENST00000587740 TRBV10-1A0A0K0K1A3 114 aa10.69□□□□□ -0.7
NCLN-203ENST00000587740 EVI2AP22794 236 aa10.69□□□□□ -0.7
NCLN-203ENST00000587740 TTC32Q5I0X7 151 aa10.69□□□□□ -0.7
NCLN-203ENST00000587740 ATP6V0E2Q8NHE4 81 aa10.69□□□□□ -0.7
NCLN-203ENST00000587740 DPH3P1Q9H4G8 78 aa10.69□□□□□ -0.7
NCLN-203ENST00000587740 NAT8BQ9UHF3 227 aa10.69□□□□□ -0.7
NCLN-203ENST00000587740 A0A1B0GUT8 65 aa10.68□□□□□ -0.7
NCLN-203ENST00000587740 PPP1R2P9O14990 202 aa10.68□□□□□ -0.7
NCLN-203ENST00000587740 LINC00315P59091 139 aa10.68□□□□□ -0.7
NCLN-203ENST00000587740 RPL36AP83881 106 aaKnown RBP10.68□□□□□ -0.7
NCLN-203ENST00000587740 Q6ZRN7 208 aaPredicted RBP10.68□□□□□ -0.7
NCLN-203ENST00000587740 RPL36ALQ969Q0 106 aaKnown RBP10.68□□□□□ -0.7
NCLN-203ENST00000587740 UPK3BQ9BT76 320 aa10.68□□□□□ -0.7
NCLN-203ENST00000587740 Q9UF83 564 aa10.68□□□□□ -0.7
NCLN-203ENST00000587740 SMIM27A0A1W2PRY6 76 aa10.67□□□□□ -0.7
NCLN-203ENST00000587740 Q5VSD8 79 aa10.67□□□□□ -0.7
NCLN-203ENST00000587740 NUP35Q8NFH5 326 aa10.67□□□□□ -0.7
NCLN-203ENST00000587740 SEC11CQ9BY50 192 aa10.67□□□□□ -0.7
NCLN-203ENST00000587740 H7C1H1 209 aa10.66□□□□□ -0.7
NCLN-203ENST00000587740 MT-ND4LP03901 98 aa10.66□□□□□ -0.7
NCLN-203ENST00000587740 ADCYAP1P18509 176 aa10.66□□□□□ -0.7
NCLN-203ENST00000587740 RIGQ13278 110 aa10.66□□□□□ -0.7
NCLN-203ENST00000587740 ANAPC16Q96DE5 110 aa10.66□□□□□ -0.7
NCLN-203ENST00000587740 GTSF1LQ9H1H1 148 aa10.66□□□□□ -0.7
NCLN-203ENST00000587740 TRBV7-3A0A075B6L6 115 aa10.65□□□□□ -0.7
NCLN-203ENST00000587740 LINC00694P0DN24 101 aa10.65□□□□□ -0.7
NCLN-203ENST00000587740 TIRAPP58753 221 aa10.65□□□□□ -0.7
NCLN-203ENST00000587740 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.7
NCLN-203ENST00000587740 SIVA1O15304 175 aa10.64□□□□□ -0.71
NCLN-203ENST00000587740 NEXN-AS1Q8NBZ9 246 aa10.64□□□□□ -0.71
NCLN-203ENST00000587740 PGPEP1Q9NXJ5 209 aa10.64□□□□□ -0.71
NCLN-203ENST00000587740 UBE2D3P61077 147 aa10.63□□□□□ -0.71
NCLN-203ENST00000587740 UBE2D2P62837 147 aa10.63□□□□□ -0.71
NCLN-203ENST00000587740 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.63□□□□□ -0.71
NCLN-203ENST00000587740 TRAV8-6A0A0B4J262 113 aa10.62□□□□□ -0.71
NCLN-203ENST00000587740 M0QY20 66 aa10.62□□□□□ -0.71
NCLN-203ENST00000587740 KRTAP10-1P60331 282 aa10.62□□□□□ -0.71
NCLN-203ENST00000587740 OR10J3Q5JRS4 329 aa10.62□□□□□ -0.71
NCLN-203ENST00000587740 LELP1Q5T871 98 aa10.62□□□□□ -0.71
NCLN-203ENST00000587740 RASL11AQ6T310 242 aa10.62□□□□□ -0.71
NCLN-203ENST00000587740 DNAJC30Q96LL9 226 aa10.62□□□□□ -0.71
NCLN-203ENST00000587740 TMEM191AQ9H0A3 160 aa10.62□□□□□ -0.71
NCLN-203ENST00000587740 TNFRSF18Q9Y5U5 241 aa10.62□□□□□ -0.71
NCLN-203ENST00000587740 FRZBQ92765 325 aa10.61□□□□□ -0.71
NCLN-203ENST00000587740 A0A087WWC5 75 aa10.6□□□□□ -0.71
NCLN-203ENST00000587740 A0A1B0GW15 77 aa10.6□□□□□ -0.71
NCLN-203ENST00000587740 C10orf91Q5T1B1 145 aa10.6□□□□□ -0.71
NCLN-203ENST00000587740 WFDC10BQ8IUB3 73 aa10.6□□□□□ -0.71
NCLN-203ENST00000587740 GATD1Q8NB37 220 aa10.6□□□□□ -0.71
NCLN-203ENST00000587740 NIT2Q9NQR4 276 aa10.6□□□□□ -0.71
NCLN-203ENST00000587740 TRAV26-2A0A0B4J265 109 aa10.59□□□□□ -0.71
NCLN-203ENST00000587740 IGHV3-38A0A0C4DH36 116 aa10.59□□□□□ -0.71
NCLN-203ENST00000587740 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
NCLN-203ENST00000587740 S100A8P05109 93 aa10.59□□□□□ -0.71
NCLN-203ENST00000587740 CAMPP49913 170 aa10.59□□□□□ -0.71
NCLN-203ENST00000587740 MRPL54Q6P161 138 aaKnown RBP10.59□□□□□ -0.71
NCLN-203ENST00000587740 DAZ4Q86SG3 579 aaKnown RBP10.59□□□□□ -0.71
NCLN-203ENST00000587740 CTDSP1Q9GZU7 261 aa10.59□□□□□ -0.71
NCLN-203ENST00000587740 DAZ3Q9NR90 486 aaKnown RBP10.59□□□□□ -0.71
NCLN-203ENST00000587740 CARHSP1Q9Y2V2 147 aaKnown RBP10.59□□□□□ -0.71
NCLN-203ENST00000587740 TRAV9-2A0A087WT02 112 aa10.58□□□□□ -0.72
NCLN-203ENST00000587740 HBBP68871 147 aa10.58□□□□□ -0.72
NCLN-203ENST00000587740 CDPF1Q6NVV7 123 aa10.58□□□□□ -0.72
NCLN-203ENST00000587740 AMN1Q8IY45 258 aa10.58□□□□□ -0.72
NCLN-203ENST00000587740 DNAH10OSP0CZ25 163 aa10.57□□□□□ -0.72
NCLN-203ENST00000587740 RAB4AP20338 218 aa10.57□□□□□ -0.72
NCLN-203ENST00000587740 TMEM97Q5BJF2 176 aa10.57□□□□□ -0.72
NCLN-203ENST00000587740 ATP5L2Q7Z4Y8 100 aa10.57□□□□□ -0.72
NCLN-203ENST00000587740 NDUFA5Q16718 116 aa10.56□□□□□ -0.72
NCLN-203ENST00000587740 MRAP2Q96G30 205 aa10.56□□□□□ -0.72
NCLN-203ENST00000587740 RNF185Q96GF1 192 aa10.56□□□□□ -0.72
NCLN-203ENST00000587740 IMMP2LQ96T52 175 aa10.56□□□□□ -0.72
NCLN-203ENST00000587740 TRBV6-8A0A0A6YYG3 113 aa10.55□□□□□ -0.72
NCLN-203ENST00000587740 A0A1B0GXF2 115 aa10.55□□□□□ -0.72
NCLN-203ENST00000587740 K7EP13 123 aa10.55□□□□□ -0.72
NCLN-203ENST00000587740 LINC01556Q5JQF7 62 aa10.55□□□□□ -0.72
NCLN-203ENST00000587740 KCNIP4Q6PIL6 250 aa10.55□□□□□ -0.72
NCLN-203ENST00000587740 CLRN3Q8NCR9 226 aa10.55□□□□□ -0.72
NCLN-203ENST00000587740 RPL39LQ96EH5 51 aaKnown RBP10.55□□□□□ -0.72
NCLN-203ENST00000587740 A0A087WTM6 91 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms