RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 ELOBQ15370 118 aa11.27□□□□□ -0.61
ATG4D-205ENST00000586477 SLC25A29Q8N8R3 303 aa11.27□□□□□ -0.61
ATG4D-205ENST00000586477 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.27□□□□□ -0.61
ATG4D-205ENST00000586477 PPBPP02775 128 aa11.26□□□□□ -0.61
ATG4D-205ENST00000586477 FAM104BQ5XKR9 115 aa11.26□□□□□ -0.61
ATG4D-205ENST00000586477 GNB1LQ9BYB4 327 aa11.26□□□□□ -0.61
ATG4D-205ENST00000586477 LINC00315P59091 139 aa11.25□□□□□ -0.61
ATG4D-205ENST00000586477 RPL36AP83881 106 aaKnown RBP11.25□□□□□ -0.61
ATG4D-205ENST00000586477 MRPL23Q16540 153 aaKnown RBP11.25□□□□□ -0.61
ATG4D-205ENST00000586477 TMEM88Q6PEY1 159 aa11.25□□□□□ -0.61
ATG4D-205ENST00000586477 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
ATG4D-205ENST00000586477 RPL36ALQ969Q0 106 aaKnown RBP11.25□□□□□ -0.61
ATG4D-205ENST00000586477 DNAJC30Q96LL9 226 aa11.25□□□□□ -0.61
ATG4D-205ENST00000586477 ICOSQ9Y6W8 199 aa11.25□□□□□ -0.61
ATG4D-205ENST00000586477 NACAE9PAV3 2078 aa11.24□□□□□ -0.61
ATG4D-205ENST00000586477 RAB4AP20338 218 aa11.24□□□□□ -0.61
ATG4D-205ENST00000586477 SUMO4Q6EEV6 95 aa11.24□□□□□ -0.61
ATG4D-205ENST00000586477 CBLN2Q8IUK8 224 aa11.24□□□□□ -0.61
ATG4D-205ENST00000586477 A0A0J9YY99 117 aa11.23□□□□□ -0.61
ATG4D-205ENST00000586477 M0QY20 66 aa11.23□□□□□ -0.61
ATG4D-205ENST00000586477 SRIP30626 198 aa11.23□□□□□ -0.61
ATG4D-205ENST00000586477 TGIF2-C20orf24A0A0A6YYL0 155 aa11.22□□□□□ -0.61
ATG4D-205ENST00000586477 GYPEP15421 78 aa11.22□□□□□ -0.61
ATG4D-205ENST00000586477 CKS2P33552 79 aa11.22□□□□□ -0.61
ATG4D-205ENST00000586477 TMEM136Q6ZRR5 245 aa11.22□□□□□ -0.61
ATG4D-205ENST00000586477 VSIG2Q96IQ7 327 aa11.22□□□□□ -0.61
ATG4D-205ENST00000586477 NIT2Q9NQR4 276 aa11.22□□□□□ -0.61
ATG4D-205ENST00000586477 LAMTOR2Q9Y2Q5 125 aa11.22□□□□□ -0.61
ATG4D-205ENST00000586477 TNFRSF18Q9Y5U5 241 aa11.22□□□□□ -0.61
ATG4D-205ENST00000586477 TRBV7-3A0A075B6L6 115 aa11.21□□□□□ -0.61
ATG4D-205ENST00000586477 APCSP02743 223 aa11.21□□□□□ -0.61
ATG4D-205ENST00000586477 MRPL51Q4U2R6 128 aaKnown RBP11.21□□□□□ -0.61
ATG4D-205ENST00000586477 ORMDL3Q8N138 153 aa11.21□□□□□ -0.61
ATG4D-205ENST00000586477 RNF185Q96GF1 192 aa11.21□□□□□ -0.61
ATG4D-205ENST00000586477 YPEL4Q96NS1 127 aa11.21□□□□□ -0.61
ATG4D-205ENST00000586477 PHOX2AO14813 284 aa11.2□□□□□ -0.62
ATG4D-205ENST00000586477 NUDT3O95989 172 aa11.2□□□□□ -0.62
ATG4D-205ENST00000586477 Q6ZSN1 163 aa11.2□□□□□ -0.62
ATG4D-205ENST00000586477 NEGR1Q7Z3B1 354 aa11.2□□□□□ -0.62
ATG4D-205ENST00000586477 TMEM97Q5BJF2 176 aa11.19□□□□□ -0.62
ATG4D-205ENST00000586477 OR10J3Q5JRS4 329 aa11.19□□□□□ -0.62
ATG4D-205ENST00000586477 TRAPPC1Q9Y5R8 145 aa11.19□□□□□ -0.62
ATG4D-205ENST00000586477 TRAV26-2A0A0B4J265 109 aa11.18□□□□□ -0.62
ATG4D-205ENST00000586477 TRBV6-5A0A0K0K1A5 114 aa11.18□□□□□ -0.62
ATG4D-205ENST00000586477 GAGE12JA6NER3 117 aa11.18□□□□□ -0.62
ATG4D-205ENST00000586477 GAGE1Q13065 139 aa11.18□□□□□ -0.62
ATG4D-205ENST00000586477 GAGE4Q13068 117 aa11.18□□□□□ -0.62
ATG4D-205ENST00000586477 GAGE5Q13069 117 aa11.18□□□□□ -0.62
ATG4D-205ENST00000586477 GAGE13Q4V321 117 aa11.18□□□□□ -0.62
ATG4D-205ENST00000586477 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
ATG4D-205ENST00000586477 NEXN-AS1Q8NBZ9 246 aa11.18□□□□□ -0.62
ATG4D-205ENST00000586477 ZNRF2Q8NHG8 242 aa11.18□□□□□ -0.62
ATG4D-205ENST00000586477 ST20Q9HBF5 79 aa11.18□□□□□ -0.62
ATG4D-205ENST00000586477 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
ATG4D-205ENST00000586477 A0A096LPF7 62 aa11.17□□□□□ -0.62
ATG4D-205ENST00000586477 D6R8Y8 96 aa11.17□□□□□ -0.62
ATG4D-205ENST00000586477 ATP6V0E2Q8NHE4 81 aa11.17□□□□□ -0.62
ATG4D-205ENST00000586477 C20orf78Q9BR46 151 aa11.17□□□□□ -0.62
ATG4D-205ENST00000586477 MRPL18Q9H0U6 180 aaKnown RBP11.17□□□□□ -0.62
ATG4D-205ENST00000586477 CCL18P55774 89 aa11.16□□□□□ -0.62
ATG4D-205ENST00000586477 UBE2D3P61077 147 aa11.16□□□□□ -0.62
ATG4D-205ENST00000586477 UBE2D2P62837 147 aa11.16□□□□□ -0.62
ATG4D-205ENST00000586477 FABP9Q0Z7S8 132 aa11.16□□□□□ -0.62
ATG4D-205ENST00000586477 PRELID3AQ96N28 172 aa11.16□□□□□ -0.62
ATG4D-205ENST00000586477 PKD1P98161 4303 aa11.16□□□□□ -0.62
ATG4D-205ENST00000586477 PKHD1P08F94 4074 aa11.16□□□□□ -0.62
ATG4D-205ENST00000586477 LOC100131303A0A0U1RQF7 123 aa11.15□□□□□ -0.62
ATG4D-205ENST00000586477 TCAPO15273 167 aa11.15□□□□□ -0.62
ATG4D-205ENST00000586477 SCO1O75880 301 aa11.15□□□□□ -0.62
ATG4D-205ENST00000586477 P0DMU3 169 aa11.15□□□□□ -0.62
ATG4D-205ENST00000586477 FAM231AP0DMU4 169 aa11.15□□□□□ -0.62
ATG4D-205ENST00000586477 FAM231CP0DMU5 169 aa11.15□□□□□ -0.62
ATG4D-205ENST00000586477 LINC00694P0DN24 101 aa11.15□□□□□ -0.62
ATG4D-205ENST00000586477 RAB5AP20339 215 aa11.15□□□□□ -0.62
ATG4D-205ENST00000586477 TIRAPP58753 221 aa11.15□□□□□ -0.62
ATG4D-205ENST00000586477 DYNC1H1Q14204 4646 aaKnown RBP11.15□□□□□ -0.63
ATG4D-205ENST00000586477 COLCA2A8K830 154 aa11.14□□□□□ -0.63
ATG4D-205ENST00000586477 TNFRSF6BO95407 300 aa11.14□□□□□ -0.63
ATG4D-205ENST00000586477 NCR2O95944 276 aa11.14□□□□□ -0.63
ATG4D-205ENST00000586477 RPS10P46783 165 aaKnown RBP11.14□□□□□ -0.63
ATG4D-205ENST00000586477 SUMO2P61956 95 aaKnown RBP11.14□□□□□ -0.63
ATG4D-205ENST00000586477 GTSF1LQ9H1H1 148 aa11.14□□□□□ -0.63
ATG4D-205ENST00000586477 HERC2O95714 4834 aa11.14□□□□□ -0.63
ATG4D-205ENST00000586477 SDHAF1A6NFY7 115 aa11.13□□□□□ -0.63
ATG4D-205ENST00000586477 VCYO14598 125 aa11.13□□□□□ -0.63
ATG4D-205ENST00000586477 RPL32P62910 135 aaKnown RBP11.13□□□□□ -0.63
ATG4D-205ENST00000586477 NRACQ8N912 160 aa11.13□□□□□ -0.63
ATG4D-205ENST00000586477 RPL39LQ96EH5 51 aaKnown RBP11.13□□□□□ -0.63
ATG4D-205ENST00000586477 MAP1LC3AQ9H492 121 aa11.13□□□□□ -0.63
ATG4D-205ENST00000586477 DNAH11Q96DT5 4516 aa11.12□□□□□ -0.63
ATG4D-205ENST00000586477 SMKR1H3BMG3 65 aa11.12□□□□□ -0.63
ATG4D-205ENST00000586477 I3L3M4 83 aa11.12□□□□□ -0.63
ATG4D-205ENST00000586477 KIR2DL4Q99706 377 aa11.12□□□□□ -0.63
ATG4D-205ENST00000586477 TRBV27A0A0K0K1C4 114 aa11.11□□□□□ -0.63
ATG4D-205ENST00000586477 PMCHP20382 165 aa11.11□□□□□ -0.63
ATG4D-205ENST00000586477 COTL1Q14019 142 aa11.11□□□□□ -0.63
ATG4D-205ENST00000586477 TMEM70Q9BUB7 260 aa11.11□□□□□ -0.63
ATG4D-205ENST00000586477 TRAV8-6A0A0B4J262 113 aa11.1□□□□□ -0.63
ATG4D-205ENST00000586477 PRSS47A8MTI9 375 aa11.1□□□□□ -0.63
ATG4D-205ENST00000586477 K7EMI3 77 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms