RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZNF56Q15929 161 aa7.52□□□□□ -1.21
BRCA1-225ENST00000586385 FMC1Q96HJ9 113 aa7.52□□□□□ -1.21
BRCA1-225ENST00000586385 GFRA4Q9GZZ7 299 aa7.52□□□□□ -1.21
BRCA1-225ENST00000586385 ALG5Q9Y673 324 aa7.52□□□□□ -1.21
BRCA1-225ENST00000586385 KIF25-AS1Q9Y6Z4 181 aa7.52□□□□□ -1.21
BRCA1-225ENST00000586385 A0A0D9SG52 128 aa7.51□□□□□ -1.21
BRCA1-225ENST00000586385 RGS21Q2M5E4 152 aa7.51□□□□□ -1.21
BRCA1-225ENST00000586385 SPACA4Q8TDM5 124 aa7.51□□□□□ -1.21
BRCA1-225ENST00000586385 SSBP4Q9BWG4 385 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-225ENST00000586385 NKX6-2Q9C056 277 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-225ENST00000586385 IGLV10-54A0A075B6I4 117 aa7.5□□□□□ -1.21
BRCA1-225ENST00000586385 SNAI2O43623 268 aa7.5□□□□□ -1.21
BRCA1-225ENST00000586385 C20orf203Q8NBC4 194 aa7.5□□□□□ -1.21
BRCA1-225ENST00000586385 CLRN3Q8NCR9 226 aa7.5□□□□□ -1.21
BRCA1-225ENST00000586385 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
BRCA1-225ENST00000586385 CXCL1P09341 107 aa7.49□□□□□ -1.21
BRCA1-225ENST00000586385 PKIAP61925 76 aa7.49□□□□□ -1.21
BRCA1-225ENST00000586385 UBE2G1P62253 170 aa7.49□□□□□ -1.21
BRCA1-225ENST00000586385 IQCJQ1A5X6 159 aa7.49□□□□□ -1.21
BRCA1-225ENST00000586385 DERL1Q9BUN8 251 aa7.49□□□□□ -1.21
BRCA1-225ENST00000586385 ZNF471Q9BX82 626 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-225ENST00000586385 IGLV4-60A0A075B6I1 120 aa7.48□□□□□ -1.21
BRCA1-225ENST00000586385 hDV102S1A0JD36 115 aa7.48□□□□□ -1.21
BRCA1-225ENST00000586385 MAP1LC3B2A6NCE7 125 aa7.48□□□□□ -1.21
BRCA1-225ENST00000586385 PHOX2AO14813 284 aa7.48□□□□□ -1.21
BRCA1-225ENST00000586385 OR5AL1P0C617 328 aa7.48□□□□□ -1.21
BRCA1-225ENST00000586385 FHITP49789 147 aa7.48□□□□□ -1.21
BRCA1-225ENST00000586385 REG3AQ06141 175 aa7.48□□□□□ -1.21
BRCA1-225ENST00000586385 INO80EQ8NBZ0 244 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-225ENST00000586385 RNF185Q96GF1 192 aa7.48□□□□□ -1.21
BRCA1-225ENST00000586385 LINC01600Q96MT4 127 aa7.48□□□□□ -1.21
BRCA1-225ENST00000586385 MLST8Q9BVC4 326 aa7.48□□□□□ -1.21
BRCA1-225ENST00000586385 MAP1LC3BQ9GZQ8 125 aa7.48□□□□□ -1.21
BRCA1-225ENST00000586385 IGHV3-64A0A075B6Q5 118 aa7.47□□□□□ -1.21
BRCA1-225ENST00000586385 G3V3Q6 166 aa7.47□□□□□ -1.21
BRCA1-225ENST00000586385 TMEM97Q5BJF2 176 aa7.47□□□□□ -1.21
BRCA1-225ENST00000586385 TRBV25-1A0A075B6N4 114 aa7.46□□□□□ -1.22
BRCA1-225ENST00000586385 F5H697 171 aa7.46□□□□□ -1.22
BRCA1-225ENST00000586385 M0QY20 66 aa7.46□□□□□ -1.22
BRCA1-225ENST00000586385 AKR1C3P42330 323 aa7.46□□□□□ -1.22
BRCA1-225ENST00000586385 SSTP61278 116 aa7.46□□□□□ -1.22
BRCA1-225ENST00000586385 CST9LP1Q5W188 147 aa7.46□□□□□ -1.22
BRCA1-225ENST00000586385 C15orf56Q8N910 161 aa7.46□□□□□ -1.22
BRCA1-225ENST00000586385 TCEAL7Q9BRU2 100 aa7.46□□□□□ -1.22
BRCA1-225ENST00000586385 CYTL1Q9NRR1 136 aa7.46□□□□□ -1.22
BRCA1-225ENST00000586385 BORCS7-ASMTA0A0B4J1R7 106 aa7.45□□□□□ -1.22
BRCA1-225ENST00000586385 IGHV1-24A0A0C4DH33 117 aa7.45□□□□□ -1.22
BRCA1-225ENST00000586385 SCO2A0A1W2PP80 73 aa7.45□□□□□ -1.22
BRCA1-225ENST00000586385 PAGE4O60829 102 aa7.45□□□□□ -1.22
BRCA1-225ENST00000586385 RAB5CP51148 216 aa7.45□□□□□ -1.22
BRCA1-225ENST00000586385 KRTAP10-8P60410 259 aa7.45□□□□□ -1.22
BRCA1-225ENST00000586385 AKR1C8PQ5T2L2 129 aa7.45□□□□□ -1.22
BRCA1-225ENST00000586385 SPANXN1Q5VSR9 72 aa7.45□□□□□ -1.22
BRCA1-225ENST00000586385 FXYD6-FXYD2A0A087WZ82 144 aa7.44□□□□□ -1.22
BRCA1-225ENST00000586385 TRAV8-4A0A0B4J246 113 aa7.44□□□□□ -1.22
BRCA1-225ENST00000586385 A0A1B0GUV1 79 aa7.44□□□□□ -1.22
BRCA1-225ENST00000586385 P01737 135 aa7.44□□□□□ -1.22
BRCA1-225ENST00000586385 GIPP09681 153 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-225ENST00000586385 PRR3P79522 188 aaKnown RBP7.44□□□□□ -1.22
BRCA1-225ENST00000586385 PRSS3P2Q8NHM4 247 aa7.44□□□□□ -1.22
BRCA1-225ENST00000586385 MED28Q9H204 178 aa7.44□□□□□ -1.22
BRCA1-225ENST00000586385 COX6A2Q02221 97 aa7.43□□□□□ -1.22
BRCA1-225ENST00000586385 SUMO4Q6EEV6 95 aa7.43□□□□□ -1.22
BRCA1-225ENST00000586385 BAGE2Q86Y30 109 aa7.43□□□□□ -1.22
BRCA1-225ENST00000586385 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-225ENST00000586385 STOML3Q8TAV4 291 aa7.43□□□□□ -1.22
BRCA1-225ENST00000586385 DPH3Q96FX2 82 aa7.43□□□□□ -1.22
BRCA1-225ENST00000586385 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-225ENST00000586385 A0A0J9YXV3 536 aa7.42□□□□□ -1.22
BRCA1-225ENST00000586385 IGLC6P0CF74 106 aa7.42□□□□□ -1.22
BRCA1-225ENST00000586385 GZMBP10144 247 aa7.42□□□□□ -1.22
BRCA1-225ENST00000586385 AP1S3Q96PC3 154 aa7.42□□□□□ -1.22
BRCA1-225ENST00000586385 TMEM243Q9BU79 118 aa7.42□□□□□ -1.22
BRCA1-225ENST00000586385 AP5S1Q9NUS5 200 aa7.42□□□□□ -1.22
BRCA1-225ENST00000586385 NKX2-5P52952 324 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-225ENST00000586385 WDR73Q6P4I2 378 aa7.41□□□□□ -1.22
BRCA1-225ENST00000586385 C7orf33Q8WU49 177 aa7.41□□□□□ -1.22
BRCA1-225ENST00000586385 IGKV2-24A0A0C4DH68 120 aa7.4□□□□□ -1.22
BRCA1-225ENST00000586385 GAGE12HA6NDE8 117 aa7.4□□□□□ -1.22
BRCA1-225ENST00000586385 S100A9P06702 114 aaKnown RBP7.4□□□□□ -1.22
BRCA1-225ENST00000586385 MGPP08493 103 aa7.4□□□□□ -1.22
BRCA1-225ENST00000586385 SMIM17P0DL12 118 aa7.4□□□□□ -1.22
BRCA1-225ENST00000586385 MAJINQ3KP22 176 aa7.4□□□□□ -1.22
BRCA1-225ENST00000586385 HIGD2BQ4VC39 106 aa7.4□□□□□ -1.22
BRCA1-225ENST00000586385 GTSF1Q8WW33 167 aa7.4□□□□□ -1.22
BRCA1-225ENST00000586385 MBD3L1Q8WWY6 194 aa7.4□□□□□ -1.22
BRCA1-225ENST00000586385 A0A096LNI7 61 aa7.39□□□□□ -1.23
BRCA1-225ENST00000586385 A0A1B0GV50 99 aa7.39□□□□□ -1.23
BRCA1-225ENST00000586385 NDUFS6O75380 124 aaKnown RBP7.39□□□□□ -1.23
BRCA1-225ENST00000586385 RPS10P46783 165 aaKnown RBP7.39□□□□□ -1.23
BRCA1-225ENST00000586385 SRSF9Q13242 221 aaKnown RBP eCLIP7.39□□□□□ -1.23
BRCA1-225ENST00000586385 LYPD6BQ8NI32 183 aa7.39□□□□□ -1.23
BRCA1-225ENST00000586385 PGLYRP4Q96LB8 373 aa7.39□□□□□ -1.23
BRCA1-225ENST00000586385 GAS8-AS1O95177 125 aa7.38□□□□□ -1.23
BRCA1-225ENST00000586385 RASL11AQ6T310 242 aa7.38□□□□□ -1.23
BRCA1-225ENST00000586385 TMUB2Q71RG4 321 aa7.38□□□□□ -1.23
BRCA1-225ENST00000586385 STPG4Q8N801 248 aa7.38□□□□□ -1.23
BRCA1-225ENST00000586385 FER1L6-AS1Q8NA97 138 aa7.38□□□□□ -1.23
BRCA1-225ENST00000586385 SFT2D1Q8WV19 159 aa7.38□□□□□ -1.23
BRCA1-225ENST00000586385 DPH3P1Q9H4G8 78 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms