RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PIK3CD-AS1Q5SR53 167 aa7.69□□□□□ -1.18
LIG3-207ENST00000586119 LINC00518Q8N0U6 118 aa7.69□□□□□ -1.18
LIG3-207ENST00000586119 NUDT10Q8NFP7 164 aa7.69□□□□□ -1.18
LIG3-207ENST00000586119 NUDT11Q96G61 164 aa7.69□□□□□ -1.18
LIG3-207ENST00000586119 DNAJC30Q96LL9 226 aa7.69□□□□□ -1.18
LIG3-207ENST00000586119 IL36BQ9NZH7 164 aa7.69□□□□□ -1.18
LIG3-207ENST00000586119 FAT3Q8TDW7 4589 aa7.68□□□□□ -1.18
LIG3-207ENST00000586119 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.68□□□□□ -1.18
LIG3-207ENST00000586119 M0R036 132 aa7.68□□□□□ -1.18
LIG3-207ENST00000586119 RNASE3P12724 160 aaKnown RBP7.68□□□□□ -1.18
LIG3-207ENST00000586119 RPL23P62829 140 aaKnown RBP7.68□□□□□ -1.18
LIG3-207ENST00000586119 CT83Q5H943 113 aa7.68□□□□□ -1.18
LIG3-207ENST00000586119 LELP1Q5T871 98 aa7.68□□□□□ -1.18
LIG3-207ENST00000586119 SH2D6Q7Z4S9 175 aa7.68□□□□□ -1.18
LIG3-207ENST00000586119 LINC00528Q8N1L1 170 aa7.68□□□□□ -1.18
LIG3-207ENST00000586119 OR2D3Q8NGH3 330 aa7.68□□□□□ -1.18
LIG3-207ENST00000586119 ATP6V0E2Q8NHE4 81 aa7.68□□□□□ -1.18
LIG3-207ENST00000586119 C9orf85Q96MD7 179 aa7.68□□□□□ -1.18
LIG3-207ENST00000586119 OSTCQ9NRP0 149 aa7.68□□□□□ -1.18
LIG3-207ENST00000586119 GATCO43716 136 aaKnown RBP7.67□□□□□ -1.18
LIG3-207ENST00000586119 ADCYAP1P18509 176 aa7.67□□□□□ -1.18
LIG3-207ENST00000586119 Q6ZSA8 131 aa7.67□□□□□ -1.18
LIG3-207ENST00000586119 DAZ4Q86SG3 579 aaKnown RBP7.67□□□□□ -1.18
LIG3-207ENST00000586119 C15orf54Q8N8G6 183 aa7.67□□□□□ -1.18
LIG3-207ENST00000586119 BAALCQ8WXS3 180 aa7.67□□□□□ -1.18
LIG3-207ENST00000586119 ISOC2Q96AB3 205 aa7.67□□□□□ -1.18
LIG3-207ENST00000586119 PRADC1Q9BSG0 188 aa7.67□□□□□ -1.18
LIG3-207ENST00000586119 GTSF1LQ9H1H1 148 aa7.67□□□□□ -1.18
LIG3-207ENST00000586119 RPP21Q9H633 154 aaKnown RBP7.67□□□□□ -1.18
LIG3-207ENST00000586119 DAZ3Q9NR90 486 aaKnown RBP7.67□□□□□ -1.18
LIG3-207ENST00000586119 SMCO4Q9NRQ5 59 aa7.67□□□□□ -1.18
LIG3-207ENST00000586119 TMSB15BA0A087X1C1 80 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 TRBV6-4A0A1B0GX49 114 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 GAGE12JA6NER3 117 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 KRTAP29-1A8MX34 341 aaPredicted RBP7.66□□□□□ -1.18
LIG3-207ENST00000586119 CIDEAO60543 219 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 ARMS2P0C7Q2 107 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 GAGE1Q13065 139 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 GAGE4Q13068 117 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 GAGE5Q13069 117 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 RHOHQ15669 191 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 ADIRFQ15847 76 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 GAGE13Q4V321 117 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 SYT8Q8NBV8 401 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 SSBP4Q9BWG4 385 aaPredicted RBP7.66□□□□□ -1.18
LIG3-207ENST00000586119 SAMD10Q9BYL1 202 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 RNASE7Q9H1E1 156 aaKnown RBP7.66□□□□□ -1.18
LIG3-207ENST00000586119 JPT2Q9H910 190 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 UBR4Q5T4S7 5183 aa7.66□□□□□ -1.18
LIG3-207ENST00000586119 GRIFINA4D1Z8 144 aa7.65□□□□□ -1.18
LIG3-207ENST00000586119 FAM231BA6NCW3 169 aa7.65□□□□□ -1.18
LIG3-207ENST00000586119 A8MWL6 223 aa7.65□□□□□ -1.18
LIG3-207ENST00000586119 F2Z2F3 143 aa7.65□□□□□ -1.18
LIG3-207ENST00000586119 H3BVH4 76 aa7.65□□□□□ -1.18
LIG3-207ENST00000586119 SNAI2O43623 268 aa7.65□□□□□ -1.18
LIG3-207ENST00000586119 OR5AL1P0C617 328 aa7.65□□□□□ -1.18
LIG3-207ENST00000586119 RPL19P84098 196 aaKnown RBP7.65□□□□□ -1.18
LIG3-207ENST00000586119 HMCN2Q8NDA2 5059 aa7.65□□□□□ -1.18
LIG3-207ENST00000586119 OR10G8Q8NGN5 311 aa7.65□□□□□ -1.18
LIG3-207ENST00000586119 SFRP2Q96HF1 295 aa7.65□□□□□ -1.18
LIG3-207ENST00000586119 PHLDA3Q9Y5J5 127 aa7.65□□□□□ -1.18
LIG3-207ENST00000586119 PKHD1L1Q86WI1 4243 aa7.64□□□□□ -1.19
LIG3-207ENST00000586119 PPP1R2P9O14990 202 aa7.64□□□□□ -1.19
LIG3-207ENST00000586119 PLA2G1BP04054 148 aaKnown RBP7.64□□□□□ -1.19
LIG3-207ENST00000586119 S100A8P05109 93 aa7.64□□□□□ -1.19
LIG3-207ENST00000586119 IGLC6P0CF74 106 aa7.64□□□□□ -1.19
LIG3-207ENST00000586119 KRTAP10-4P60372 401 aaPredicted RBP7.64□□□□□ -1.19
LIG3-207ENST00000586119 RAB5BP61020 215 aa7.64□□□□□ -1.19
LIG3-207ENST00000586119 RHEBQ15382 184 aa7.64□□□□□ -1.19
LIG3-207ENST00000586119 WDR73Q6P4I2 378 aa7.64□□□□□ -1.19
LIG3-207ENST00000586119 ZFP82Q8N141 532 aa7.64□□□□□ -1.19
LIG3-207ENST00000586119 C14orf178Q8N769 122 aaPredicted RBP7.64□□□□□ -1.19
LIG3-207ENST00000586119 FER1L6-AS1Q8NA97 138 aa7.64□□□□□ -1.19
LIG3-207ENST00000586119 GFRA4Q9GZZ7 299 aa7.64□□□□□ -1.19
LIG3-207ENST00000586119 A8MWV9 139 aa7.63□□□□□ -1.19
LIG3-207ENST00000586119 MT-ND4LP03901 98 aa7.63□□□□□ -1.19
LIG3-207ENST00000586119 LINC00694P0DN24 101 aa7.63□□□□□ -1.19
LIG3-207ENST00000586119 FOXA3P55318 350 aaPredicted RBP7.63□□□□□ -1.19
LIG3-207ENST00000586119 CACNG7P62955 275 aa7.63□□□□□ -1.19
LIG3-207ENST00000586119 SCXQ7RTU7 201 aa7.63□□□□□ -1.19
LIG3-207ENST00000586119 TSKUQ8WUA8 353 aa7.63□□□□□ -1.19
LIG3-207ENST00000586119 TM2D2Q9BX73 214 aa7.63□□□□□ -1.19
LIG3-207ENST00000586119 V9GYV3 84 aa7.63□□□□□ -1.19
LIG3-207ENST00000586119 CTRLP40313 264 aa7.62□□□□□ -1.19
LIG3-207ENST00000586119 CTAG1AP78358 180 aa7.62□□□□□ -1.19
LIG3-207ENST00000586119 LAGE3Q14657 143 aa7.62□□□□□ -1.19
LIG3-207ENST00000586119 DEFB104AQ8WTQ1 72 aa7.62□□□□□ -1.19
LIG3-207ENST00000586119 ANAPC16Q96DE5 110 aa7.62□□□□□ -1.19
LIG3-207ENST00000586119 C1orf196B1AJZ1 125 aa7.61□□□□□ -1.19
LIG3-207ENST00000586119 SMIM6P0DI80 62 aa7.61□□□□□ -1.19
LIG3-207ENST00000586119 GZMBP10144 247 aa7.61□□□□□ -1.19
LIG3-207ENST00000586119 SPANXN1Q5VSR9 72 aa7.61□□□□□ -1.19
LIG3-207ENST00000586119 UFSP1Q6NVU6 142 aa7.61□□□□□ -1.19
LIG3-207ENST00000586119 CBLN2Q8IUK8 224 aa7.61□□□□□ -1.19
LIG3-207ENST00000586119 CNFNQ9BYD5 112 aa7.61□□□□□ -1.19
LIG3-207ENST00000586119 TRAV8-3A0A0A6YYJ7 113 aa7.6□□□□□ -1.19
LIG3-207ENST00000586119 COLCA2A8K830 154 aa7.6□□□□□ -1.19
LIG3-207ENST00000586119 M0R381 172 aa7.6□□□□□ -1.19
LIG3-207ENST00000586119 RHODO00212 210 aa7.6□□□□□ -1.19
LIG3-207ENST00000586119 DMRTA1Q5VZB9 504 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms