RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 A0A087WX48 190 aa14.23□□□□□ -0.13
PPP4R1-228ENST00000584074 P01737 135 aa14.23□□□□□ -0.13
PPP4R1-228ENST00000584074 TRBV6-8A0A0A6YYG3 113 aa14.22□□□□□ -0.13
PPP4R1-228ENST00000584074 LECT2O14960 151 aa14.22□□□□□ -0.13
PPP4R1-228ENST00000584074 TAGLN2P37802 199 aaKnown RBP14.21□□□□□ -0.13
PPP4R1-228ENST00000584074 ALKAL2Q6UX46 152 aa14.21□□□□□ -0.13
PPP4R1-228ENST00000584074 TMEM262E9PQX1 116 aa14.2□□□□□ -0.14
PPP4R1-228ENST00000584074 KCNIP4Q6PIL6 250 aa14.2□□□□□ -0.14
PPP4R1-228ENST00000584074 CHCHD7Q9BUK0 85 aa14.2□□□□□ -0.14
PPP4R1-228ENST00000584074 XKRY2A2RUG3 117 aa14.19□□□□□ -0.14
PPP4R1-228ENST00000584074 MGPP08493 103 aa14.19□□□□□ -0.14
PPP4R1-228ENST00000584074 CACNG7P62955 275 aa14.19□□□□□ -0.14
PPP4R1-228ENST00000584074 NUDT10Q8NFP7 164 aa14.19□□□□□ -0.14
PPP4R1-228ENST00000584074 BAALCQ8WXS3 180 aa14.19□□□□□ -0.14
PPP4R1-228ENST00000584074 UBE2WQ96B02 151 aa14.19□□□□□ -0.14
PPP4R1-228ENST00000584074 NUDT11Q96G61 164 aa14.19□□□□□ -0.14
PPP4R1-228ENST00000584074 BIN3Q9NQY0 253 aa14.19□□□□□ -0.14
PPP4R1-228ENST00000584074 FAT1Q14517 4588 aa14.19□□□□□ -0.14
PPP4R1-228ENST00000584074 IGKV2D-24A0A075B6R9 120 aa14.18□□□□□ -0.14
PPP4R1-228ENST00000584074 F2Z2F3 143 aa14.18□□□□□ -0.14
PPP4R1-228ENST00000584074 ELOBQ15370 118 aa14.18□□□□□ -0.14
PPP4R1-228ENST00000584074 LYZL1Q6UWQ5 148 aa14.18□□□□□ -0.14
PPP4R1-228ENST00000584074 RMI2Q96E14 147 aa14.18□□□□□ -0.14
PPP4R1-228ENST00000584074 COX11Q9Y6N1 276 aa14.18□□□□□ -0.14
PPP4R1-228ENST00000584074 M0QY20 66 aa14.17□□□□□ -0.14
PPP4R1-228ENST00000584074 HAMPP81172 84 aa14.17□□□□□ -0.14
PPP4R1-228ENST00000584074 NTM-AS1Q6ZSK4 140 aa14.17□□□□□ -0.14
PPP4R1-228ENST00000584074 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.17□□□□□ -0.14
PPP4R1-228ENST00000584074 OCC1Q8TAD7 63 aa14.17□□□□□ -0.14
PPP4R1-228ENST00000584074 EPM2AB3EWF7 344 aa14.16□□□□□ -0.14
PPP4R1-228ENST00000584074 K7EN84 100 aa14.16□□□□□ -0.14
PPP4R1-228ENST00000584074 BLOC1S1P78537 153 aa14.16□□□□□ -0.14
PPP4R1-228ENST00000584074 MPV17L2Q567V2 206 aa14.16□□□□□ -0.14
PPP4R1-228ENST00000584074 SUMO4Q6EEV6 95 aa14.16□□□□□ -0.14
PPP4R1-228ENST00000584074 CHCHD5Q9BSY4 110 aa14.16□□□□□ -0.14
PPP4R1-228ENST00000584074 RNASE7Q9H1E1 156 aaKnown RBP14.16□□□□□ -0.14
PPP4R1-228ENST00000584074 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.14□□□□□ -0.15
PPP4R1-228ENST00000584074 NTF3P20783 257 aa14.14□□□□□ -0.15
PPP4R1-228ENST00000584074 CTRLP40313 264 aa14.14□□□□□ -0.15
PPP4R1-228ENST00000584074 NKX2-5P52952 324 aaPredicted RBP14.14□□□□□ -0.15
PPP4R1-228ENST00000584074 C15orf54Q8N8G6 183 aa14.14□□□□□ -0.15
PPP4R1-228ENST00000584074 LYPD6BQ8NI32 183 aa14.14□□□□□ -0.15
PPP4R1-228ENST00000584074 TMEM70Q9BUB7 260 aa14.14□□□□□ -0.15
PPP4R1-228ENST00000584074 RPP21Q9H633 154 aaKnown RBP14.14□□□□□ -0.15
PPP4R1-228ENST00000584074 H7C1H1 209 aa14.13□□□□□ -0.15
PPP4R1-228ENST00000584074 SMR3BP02814 79 aaPredicted RBP14.13□□□□□ -0.15
PPP4R1-228ENST00000584074 TRGC1P0CF51 173 aa14.13□□□□□ -0.15
PPP4R1-228ENST00000584074 TMEM97Q5BJF2 176 aa14.13□□□□□ -0.15
PPP4R1-228ENST00000584074 ATRAIDQ6UW56 229 aa14.13□□□□□ -0.15
PPP4R1-228ENST00000584074 ENHOQ6UWT2 76 aa14.13□□□□□ -0.15
PPP4R1-228ENST00000584074 Q8N976 141 aa14.13□□□□□ -0.15
PPP4R1-228ENST00000584074 FAM30AQ9NZY2 134 aa14.13□□□□□ -0.15
PPP4R1-228ENST00000584074 DNAH8Q96JB1 4490 aa14.13□□□□□ -0.15
PPP4R1-228ENST00000584074 A0A1B0GVG6 124 aa14.12□□□□□ -0.15
PPP4R1-228ENST00000584074 TMEM250H0YL14 139 aa14.12□□□□□ -0.15
PPP4R1-228ENST00000584074 Q0VG73 95 aa14.12□□□□□ -0.15
PPP4R1-228ENST00000584074 ANGP03950 147 aaKnown RBP14.11□□□□□ -0.15
PPP4R1-228ENST00000584074 GAGE6Q13070 117 aa14.11□□□□□ -0.15
PPP4R1-228ENST00000584074 WDR73Q6P4I2 378 aa14.11□□□□□ -0.15
PPP4R1-228ENST00000584074 PKIAP61925 76 aa14.1□□□□□ -0.15
PPP4R1-228ENST00000584074 TWIST1Q15672 202 aa14.1□□□□□ -0.15
PPP4R1-228ENST00000584074 Q5VSD8 79 aa14.1□□□□□ -0.15
PPP4R1-228ENST00000584074 RASL11AQ6T310 242 aa14.1□□□□□ -0.15
PPP4R1-228ENST00000584074 C1orf43Q9BWL3 253 aa14.1□□□□□ -0.15
PPP4R1-228ENST00000584074 DPH3P1Q9H4G8 78 aa14.1□□□□□ -0.15
PPP4R1-228ENST00000584074 TRBV25-1A0A075B6N4 114 aa14.09□□□□□ -0.15
PPP4R1-228ENST00000584074 CRPP02741 224 aa14.09□□□□□ -0.15
PPP4R1-228ENST00000584074 CEBPGP53567 150 aa14.09□□□□□ -0.15
PPP4R1-228ENST00000584074 RBX1P62877 108 aa14.09□□□□□ -0.15
PPP4R1-228ENST00000584074 IQCJQ1A5X6 159 aa14.09□□□□□ -0.15
PPP4R1-228ENST00000584074 GTSF1Q8WW33 167 aa14.09□□□□□ -0.15
PPP4R1-228ENST00000584074 FRZBQ92765 325 aa14.09□□□□□ -0.15
PPP4R1-228ENST00000584074 CNFNQ9BYD5 112 aa14.09□□□□□ -0.15
PPP4R1-228ENST00000584074 VPS13BQ7Z7G8 4022 aa14.08□□□□□ -0.15
PPP4R1-228ENST00000584074 LINC01620Q4KN68 170 aa14.08□□□□□ -0.16
PPP4R1-228ENST00000584074 IGHV1-24A0A0C4DH33 117 aa14.07□□□□□ -0.16
PPP4R1-228ENST00000584074 NIT2Q9NQR4 276 aa14.07□□□□□ -0.16
PPP4R1-228ENST00000584074 CLPSL2Q6UWE3 100 aa14.06□□□□□ -0.16
PPP4R1-228ENST00000584074 DEFB104AQ8WTQ1 72 aa14.06□□□□□ -0.16
PPP4R1-228ENST00000584074 EIF5A2Q9GZV4 153 aaKnown RBP14.06□□□□□ -0.16
PPP4R1-228ENST00000584074 SRRM2Q9UQ35 2752 aaKnown RBP14.05□□□□□ -0.16
PPP4R1-228ENST00000584074 GATCO43716 136 aaKnown RBP14.05□□□□□ -0.16
PPP4R1-228ENST00000584074 LINC00269Q8N2A0 174 aa14.05□□□□□ -0.16
PPP4R1-228ENST00000584074 PRR34Q9NV39 138 aa14.05□□□□□ -0.16
PPP4R1-228ENST00000584074 MIAQ16674 131 aa14.04□□□□□ -0.16
PPP4R1-228ENST00000584074 FAM231DQ6ZW35 169 aa14.04□□□□□ -0.16
PPP4R1-228ENST00000584074 TRAV26-2A0A0B4J265 109 aa14.03□□□□□ -0.16
PPP4R1-228ENST00000584074 INAFM2P0DMQ5 153 aa14.03□□□□□ -0.16
PPP4R1-228ENST00000584074 FOXA3P55318 350 aaPredicted RBP14.03□□□□□ -0.16
PPP4R1-228ENST00000584074 Q6ZSA8 131 aa14.03□□□□□ -0.16
PPP4R1-228ENST00000584074 GATD1Q8NB37 220 aa14.03□□□□□ -0.16
PPP4R1-228ENST00000584074 SMIM7Q9BQ49 75 aa14.03□□□□□ -0.16
PPP4R1-228ENST00000584074 FAM229AH3BQW9 127 aa14.02□□□□□ -0.17
PPP4R1-228ENST00000584074 HLA-DQA1P01909 254 aa14.02□□□□□ -0.17
PPP4R1-228ENST00000584074 PGLYRP4Q96LB8 373 aa14.02□□□□□ -0.17
PPP4R1-228ENST00000584074 FAM210AQ96ND0 272 aa14.02□□□□□ -0.17
PPP4R1-228ENST00000584074 TMEM243Q9BU79 118 aa14.02□□□□□ -0.17
PPP4R1-228ENST00000584074 A8MWL6 223 aa14.01□□□□□ -0.17
PPP4R1-228ENST00000584074 SMIM15Q7Z3B0 74 aa14□□□□□ -0.17
PPP4R1-228ENST00000584074 LINC01551Q86U37 167 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms