RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 IGHV7-81A0A0B4J1V7 117 aa8.82□□□□□ -1
CDK5RAP3-231ENST00000584063 H7C1H1 209 aa8.82□□□□□ -1
CDK5RAP3-231ENST00000584063 C10orf105Q8TEF2 133 aa8.82□□□□□ -1
CDK5RAP3-231ENST00000584063 PLEKHB2Q96CS7 222 aa8.82□□□□□ -1
CDK5RAP3-231ENST00000584063 NF1P21359 2839 aa8.81□□□□□ -1
CDK5RAP3-231ENST00000584063 SNCGO76070 127 aa8.81□□□□□ -1
CDK5RAP3-231ENST00000584063 FCER1GP30273 86 aa8.81□□□□□ -1
CDK5RAP3-231ENST00000584063 FXYD2P54710 66 aa8.81□□□□□ -1
CDK5RAP3-231ENST00000584063 C15orf32Q32M92 178 aa8.81□□□□□ -1
CDK5RAP3-231ENST00000584063 CLEC19AQ6UXS0 136 aa8.81□□□□□ -1
CDK5RAP3-231ENST00000584063 C11orf21Q9P2W6 132 aa8.81□□□□□ -1
CDK5RAP3-231ENST00000584063 FLNBO75369 2602 aaKnown RBP8.81□□□□□ -1
CDK5RAP3-231ENST00000584063 LY6EQ16553 131 aa8.8□□□□□ -1
CDK5RAP3-231ENST00000584063 OR10J6PQ8NGY7 276 aa8.8□□□□□ -1
CDK5RAP3-231ENST00000584063 TMEM158Q8WZ71 300 aa8.8□□□□□ -1
CDK5RAP3-231ENST00000584063 RNF185Q96GF1 192 aa8.8□□□□□ -1
CDK5RAP3-231ENST00000584063 UNC79Q9P2D8 2635 aa8.8□□□□□ -1
CDK5RAP3-231ENST00000584063 TRAV4A0A0B4J268 109 aa8.8□□□□□ -1
CDK5RAP3-231ENST00000584063 IGHV4-38-2P0DP08 117 aa8.8□□□□□ -1
CDK5RAP3-231ENST00000584063 ZNF493Q6ZR52 646 aa8.8□□□□□ -1
CDK5RAP3-231ENST00000584063 Q8N9W7 124 aa8.8□□□□□ -1
CDK5RAP3-231ENST00000584063 ATP6V0E1O15342 81 aa8.79□□□□□ -1
CDK5RAP3-231ENST00000584063 CHCHD5Q9BSY4 110 aa8.79□□□□□ -1
CDK5RAP3-231ENST00000584063 NOTCH3Q9UM47 2321 aa8.79□□□□□ -1
CDK5RAP3-231ENST00000584063 SFTA2Q6UW10 78 aa8.79□□□□□ -1
CDK5RAP3-231ENST00000584063 Q8N6K4 173 aa8.79□□□□□ -1
CDK5RAP3-231ENST00000584063 RNF5Q99942 180 aa8.79□□□□□ -1
CDK5RAP3-231ENST00000584063 RNF223E7ERA6 249 aa8.78□□□□□ -1
CDK5RAP3-231ENST00000584063 LYPD1Q8N2G4 141 aa8.78□□□□□ -1
CDK5RAP3-231ENST00000584063 NHP2Q9NX24 153 aaKnown RBP8.78□□□□□ -1
CDK5RAP3-231ENST00000584063 NDUFC2O95298 119 aa8.78□□□□□ -1
CDK5RAP3-231ENST00000584063 LGALS9BQ3B8N2 356 aa8.78□□□□□ -1
CDK5RAP3-231ENST00000584063 LGALS9CQ6DKI2 356 aa8.78□□□□□ -1
CDK5RAP3-231ENST00000584063 C3orf22Q8N5N4 141 aa8.78□□□□□ -1
CDK5RAP3-231ENST00000584063 IGKV3D-20A0A0C4DH25 116 aa8.78□□□□□ -1
CDK5RAP3-231ENST00000584063 Q6Q795 121 aa8.78□□□□□ -1
CDK5RAP3-231ENST00000584063 MSMBP08118 114 aa8.77□□□□□ -1.01
CDK5RAP3-231ENST00000584063 PAX8Q06710 450 aa8.77□□□□□ -1.01
CDK5RAP3-231ENST00000584063 SAMD5Q5TGI4 173 aa8.77□□□□□ -1.01
CDK5RAP3-231ENST00000584063 GAGE2AQ6NT46 116 aa8.77□□□□□ -1.01
CDK5RAP3-231ENST00000584063 AGPAT4-IT1Q9H0P7 198 aa8.77□□□□□ -1.01
CDK5RAP3-231ENST00000584063 U3KQK5 164 aa8.77□□□□□ -1.01
CDK5RAP3-231ENST00000584063 DPM2O94777 84 aa8.77□□□□□ -1.01
CDK5RAP3-231ENST00000584063 MINOS1Q5TGZ0 78 aa8.77□□□□□ -1.01
CDK5RAP3-231ENST00000584063 MAPKAPK5-AS1Q8N8E1 139 aa8.77□□□□□ -1.01
CDK5RAP3-231ENST00000584063 MINOS1-NBL1R4GNA1 71 aa8.77□□□□□ -1.01
CDK5RAP3-231ENST00000584063 AMTNQ6UX39 209 aa8.76□□□□□ -1.01
CDK5RAP3-231ENST00000584063 FAM19A4Q96LR4 140 aa8.76□□□□□ -1.01
CDK5RAP3-231ENST00000584063 MRPL35Q9NZE8 188 aaKnown RBP8.76□□□□□ -1.01
CDK5RAP3-231ENST00000584063 U3KQE9 123 aa8.76□□□□□ -1.01
CDK5RAP3-231ENST00000584063 A0A1B0GWB2 263 aa8.76□□□□□ -1.01
CDK5RAP3-231ENST00000584063 H3BVH4 76 aa8.76□□□□□ -1.01
CDK5RAP3-231ENST00000584063 DUSP14O95147 198 aaKnown RBP8.76□□□□□ -1.01
CDK5RAP3-231ENST00000584063 M0R381 172 aa8.75□□□□□ -1.01
CDK5RAP3-231ENST00000584063 PDE6HQ13956 83 aa8.75□□□□□ -1.01
CDK5RAP3-231ENST00000584063 PIFOQ8TCI5 191 aa8.75□□□□□ -1.01
CDK5RAP3-231ENST00000584063 DSCR8Q96T75 97 aa8.75□□□□□ -1.01
CDK5RAP3-231ENST00000584063 HHLA3Q9XRX5 114 aa8.75□□□□□ -1.01
CDK5RAP3-231ENST00000584063 TRBV6-1A0A0K0K1D8 114 aa8.75□□□□□ -1.01
CDK5RAP3-231ENST00000584063 RPL11P62913 178 aaKnown RBP8.75□□□□□ -1.01
CDK5RAP3-231ENST00000584063 CHAC1Q9BUX1 264 aa8.75□□□□□ -1.01
CDK5RAP3-231ENST00000584063 IGHV1-69DA0A0B4J2H0 117 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 RBAKDNA6NC62 111 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 PAX4O43316 350 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 IGHV1-69P01742 117 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 SPANXN1Q5VSR9 72 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 TRBV25-1A0A075B6N4 114 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 CLPSL1A2RUU4 121 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 B4DSR2 109 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 TMEM262E9PQX1 116 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 F6UB75 175 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 IGKCP01834 107 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 PRR9Q5T870 116 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.74□□□□□ -1.01
CDK5RAP3-231ENST00000584063 H3BUX3 64 aa8.73□□□□□ -1.01
CDK5RAP3-231ENST00000584063 TRBV12-3P01733 135 aa8.73□□□□□ -1.01
CDK5RAP3-231ENST00000584063 SRSF9Q13242 221 aaKnown RBP eCLIP8.73□□□□□ -1.012e-12■■□□□ 12.4
CDK5RAP3-231ENST00000584063 PRIMA1Q86XR5 153 aa8.73□□□□□ -1.01
CDK5RAP3-231ENST00000584063 ZFAND3Q9H8U3 227 aa8.73□□□□□ -1.01
CDK5RAP3-231ENST00000584063 BUB3O43684 328 aa8.73□□□□□ -1.01
CDK5RAP3-231ENST00000584063 DAZ2Q13117 558 aaKnown RBP8.73□□□□□ -1.01
CDK5RAP3-231ENST00000584063 DAZ4Q86SG3 579 aaKnown RBP8.73□□□□□ -1.01
CDK5RAP3-231ENST00000584063 DAZ1Q9NQZ3 744 aaKnown RBP8.73□□□□□ -1.01
CDK5RAP3-231ENST00000584063 DAZ3Q9NR90 486 aaKnown RBP8.73□□□□□ -1.01
CDK5RAP3-231ENST00000584063 IGHV3-11P01762 117 aa8.73□□□□□ -1.01
CDK5RAP3-231ENST00000584063 SMIM13P0DJ93 91 aa8.73□□□□□ -1.01
CDK5RAP3-231ENST00000584063 GAGE13Q4V321 117 aa8.73□□□□□ -1.01
CDK5RAP3-231ENST00000584063 EBI3Q14213 229 aa8.72□□□□□ -1.01
CDK5RAP3-231ENST00000584063 RPL39LQ96EH5 51 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP3-231ENST00000584063 DLX4Q92988 240 aaPredicted RBP8.72□□□□□ -1.01
CDK5RAP3-231ENST00000584063 TRAV8-2A0A0B4J237 113 aa8.71□□□□□ -1.01
CDK5RAP3-231ENST00000584063 H3BMG7 143 aa8.71□□□□□ -1.01
CDK5RAP3-231ENST00000584063 MGPP08493 103 aa8.71□□□□□ -1.01
CDK5RAP3-231ENST00000584063 Q6ZS46 218 aa8.71□□□□□ -1.01
CDK5RAP3-231ENST00000584063 NFE4Q86UQ8 179 aa8.71□□□□□ -1.01
CDK5RAP3-231ENST00000584063 C14orf178Q8N769 122 aaPredicted RBP8.71□□□□□ -1.01
CDK5RAP3-231ENST00000584063 PLA2G2AP14555 144 aa8.71□□□□□ -1.02
CDK5RAP3-231ENST00000584063 LINC00526Q96FQ7 95 aa8.71□□□□□ -1.02
CDK5RAP3-231ENST00000584063 PSMG3-AS1Q96PY0 264 aa8.71□□□□□ -1.02
CDK5RAP3-231ENST00000584063 Q9H8V8 135 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms