RNA–Protein interactions for RNA: ENST00000584025.1

ITGB4-210, Transcript of integrin subunit beta 4, humanhuman

TSL 5

Gene ITGB4, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-210ENST00000584025 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.48□□□□□ -0.73
ITGB4-210ENST00000584025 A0A1B0GUT8 65 aa10.47□□□□□ -0.73
ITGB4-210ENST00000584025 M0QY20 66 aa10.47□□□□□ -0.73
ITGB4-210ENST00000584025 TNFRSF18Q9Y5U5 241 aa10.47□□□□□ -0.73
ITGB4-210ENST00000584025 RASL11AQ6T310 242 aa10.46□□□□□ -0.73
ITGB4-210ENST00000584025 DNAJC30Q96LL9 226 aa10.46□□□□□ -0.73
ITGB4-210ENST00000584025 K7EP13 123 aa10.45□□□□□ -0.74
ITGB4-210ENST00000584025 IGHV3-30P01768 117 aa10.45□□□□□ -0.74
ITGB4-210ENST00000584025 IGHV3-33P01772 117 aa10.45□□□□□ -0.74
ITGB4-210ENST00000584025 IGHV3-30-3P0DP02 117 aa10.45□□□□□ -0.74
ITGB4-210ENST00000584025 IGHV3-30-5P0DP03 117 aa10.45□□□□□ -0.74
ITGB4-210ENST00000584025 BTF3P20290 206 aaKnown RBP10.45□□□□□ -0.74
ITGB4-210ENST00000584025 RIGQ13278 110 aa10.45□□□□□ -0.74
ITGB4-210ENST00000584025 LINC01556Q5JQF7 62 aa10.45□□□□□ -0.74
ITGB4-210ENST00000584025 C10orf126Q8N4M7 172 aa10.45□□□□□ -0.74
ITGB4-210ENST00000584025 NUP35Q8NFH5 326 aa10.45□□□□□ -0.74
ITGB4-210ENST00000584025 NAT8BQ9UHF3 227 aa10.45□□□□□ -0.74
ITGB4-210ENST00000584025 FRAS1Q86XX4 4008 aa10.44□□□□□ -0.74
ITGB4-210ENST00000584025 UQCC3Q6UW78 93 aa10.44□□□□□ -0.74
ITGB4-210ENST00000584025 SMIM27A0A1W2PRY6 76 aa10.43□□□□□ -0.74
ITGB4-210ENST00000584025 PNRC1Q12796 327 aaPredicted RBP10.43□□□□□ -0.74
ITGB4-210ENST00000584025 DAZ4Q86SG3 579 aaKnown RBP10.43□□□□□ -0.74
ITGB4-210ENST00000584025 NIT2Q9NQR4 276 aa10.43□□□□□ -0.74
ITGB4-210ENST00000584025 DAZ3Q9NR90 486 aaKnown RBP10.43□□□□□ -0.74
ITGB4-210ENST00000584025 TRAV26-2A0A0B4J265 109 aa10.42□□□□□ -0.74
ITGB4-210ENST00000584025 PPP1R2P9O14990 202 aa10.42□□□□□ -0.74
ITGB4-210ENST00000584025 TMEM97Q5BJF2 176 aa10.42□□□□□ -0.74
ITGB4-210ENST00000584025 COMMD7Q86VX2 200 aa10.42□□□□□ -0.74
ITGB4-210ENST00000584025 GATD1Q8NB37 220 aa10.42□□□□□ -0.74
ITGB4-210ENST00000584025 URGCP-MRPS24S4R325 110 aa10.42□□□□□ -0.74
ITGB4-210ENST00000584025 DNAH17Q9UFH2 4485 aa10.42□□□□□ -0.74
ITGB4-210ENST00000584025 TRBV6-8A0A0A6YYG3 113 aa10.41□□□□□ -0.74
ITGB4-210ENST00000584025 TNP2Q05952 138 aa10.41□□□□□ -0.74
ITGB4-210ENST00000584025 NFE4Q86UQ8 179 aa10.41□□□□□ -0.74
ITGB4-210ENST00000584025 Q8N3U1 123 aa10.41□□□□□ -0.74
ITGB4-210ENST00000584025 TMEM191AQ9H0A3 160 aa10.41□□□□□ -0.74
ITGB4-210ENST00000584025 KCNIP4Q6PIL6 250 aa10.4□□□□□ -0.74
ITGB4-210ENST00000584025 NIT1Q86X76 327 aa10.4□□□□□ -0.74
ITGB4-210ENST00000584025 A0A087WX48 190 aa10.39□□□□□ -0.75
ITGB4-210ENST00000584025 TMEM218A2RU14 115 aa10.39□□□□□ -0.75
ITGB4-210ENST00000584025 IBA57-AS1B1ANH7 110 aa10.39□□□□□ -0.75
ITGB4-210ENST00000584025 TMEM262E9PQX1 116 aa10.39□□□□□ -0.75
ITGB4-210ENST00000584025 F8W036 122 aa10.39□□□□□ -0.75
ITGB4-210ENST00000584025 MT-ND4LP03901 98 aa10.39□□□□□ -0.75
ITGB4-210ENST00000584025 NTM-AS1Q6ZSK4 140 aa10.39□□□□□ -0.75
ITGB4-210ENST00000584025 FRZBQ92765 325 aa10.39□□□□□ -0.75
ITGB4-210ENST00000584025 RPL39LQ96EH5 51 aaKnown RBP10.39□□□□□ -0.75
ITGB4-210ENST00000584025 CHCHD5Q9BSY4 110 aa10.39□□□□□ -0.75
ITGB4-210ENST00000584025 EPPK1P58107 5090 aaKnown RBP10.39□□□□□ -0.75
ITGB4-210ENST00000584025 TRBV25-1A0A075B6N4 114 aa10.38□□□□□ -0.75
ITGB4-210ENST00000584025 A0A1B0GVY2 172 aa10.38□□□□□ -0.75
ITGB4-210ENST00000584025 CAMPP49913 170 aa10.38□□□□□ -0.75
ITGB4-210ENST00000584025 MRPL54Q6P161 138 aaKnown RBP10.38□□□□□ -0.75
ITGB4-210ENST00000584025 Q6ZRN7 208 aaPredicted RBP10.38□□□□□ -0.75
ITGB4-210ENST00000584025 AMN1Q8IY45 258 aa10.38□□□□□ -0.75
ITGB4-210ENST00000584025 ANAPC16Q96DE5 110 aa10.38□□□□□ -0.75
ITGB4-210ENST00000584025 Q9HAA7 133 aa10.38□□□□□ -0.75
ITGB4-210ENST00000584025 DNAH2Q9P225 4427 aa10.38□□□□□ -0.75
ITGB4-210ENST00000584025 IGHV1-24A0A0C4DH33 117 aa10.37□□□□□ -0.75
ITGB4-210ENST00000584025 A0A1B0GW15 77 aa10.37□□□□□ -0.75
ITGB4-210ENST00000584025 LINC00862A6NCI5 91 aa10.37□□□□□ -0.75
ITGB4-210ENST00000584025 ADCYAP1P18509 176 aa10.37□□□□□ -0.75
ITGB4-210ENST00000584025 RNF185Q96GF1 192 aa10.37□□□□□ -0.75
ITGB4-210ENST00000584025 S100A8P05109 93 aa10.36□□□□□ -0.75
ITGB4-210ENST00000584025 RAB4AP20338 218 aa10.36□□□□□ -0.75
ITGB4-210ENST00000584025 PKIAP61925 76 aa10.36□□□□□ -0.75
ITGB4-210ENST00000584025 COTL1Q14019 142 aa10.36□□□□□ -0.75
ITGB4-210ENST00000584025 LAGE3Q14657 143 aa10.36□□□□□ -0.75
ITGB4-210ENST00000584025 DEFB104AQ8WTQ1 72 aa10.36□□□□□ -0.75
ITGB4-210ENST00000584025 MRAP2Q96G30 205 aa10.36□□□□□ -0.75
ITGB4-210ENST00000584025 CHCHD7Q9BUK0 85 aa10.36□□□□□ -0.75
ITGB4-210ENST00000584025 KLK12Q9UKR0 248 aa10.36□□□□□ -0.75
ITGB4-210ENST00000584025 HBBP68871 147 aa10.35□□□□□ -0.75
ITGB4-210ENST00000584025 GAGE6Q13070 117 aa10.35□□□□□ -0.75
ITGB4-210ENST00000584025 ELOBQ15370 118 aa10.35□□□□□ -0.75
ITGB4-210ENST00000584025 IQCJQ1A5X6 159 aa10.35□□□□□ -0.75
ITGB4-210ENST00000584025 SEC11CQ9BY50 192 aa10.35□□□□□ -0.75
ITGB4-210ENST00000584025 SDHAF1A6NFY7 115 aa10.34□□□□□ -0.75
ITGB4-210ENST00000584025 SMKR1H3BMG3 65 aa10.34□□□□□ -0.75
ITGB4-210ENST00000584025 PSCAO43653 123 aa10.34□□□□□ -0.75
ITGB4-210ENST00000584025 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
ITGB4-210ENST00000584025 FAM104BQ5XKR9 115 aa10.34□□□□□ -0.75
ITGB4-210ENST00000584025 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
ITGB4-210ENST00000584025 ST20Q9HBF5 79 aa10.34□□□□□ -0.75
ITGB4-210ENST00000584025 TRAV8-3A0A0A6YYJ7 113 aa10.33□□□□□ -0.76
ITGB4-210ENST00000584025 NCR2O95944 276 aa10.33□□□□□ -0.76
ITGB4-210ENST00000584025 AMTP48728 403 aa10.33□□□□□ -0.76
ITGB4-210ENST00000584025 MPV17L2Q567V2 206 aa10.33□□□□□ -0.76
ITGB4-210ENST00000584025 ATRAIDQ6UW56 229 aa10.33□□□□□ -0.76
ITGB4-210ENST00000584025 TRBV6-5A0A0K0K1A5 114 aa10.32□□□□□ -0.76
ITGB4-210ENST00000584025 A0A1B0GXF2 115 aa10.32□□□□□ -0.76
ITGB4-210ENST00000584025 EREGO14944 169 aa10.32□□□□□ -0.76
ITGB4-210ENST00000584025 PMCHP20382 165 aa10.32□□□□□ -0.76
ITGB4-210ENST00000584025 RPS10P46783 165 aaKnown RBP10.32□□□□□ -0.76
ITGB4-210ENST00000584025 MRPL51Q4U2R6 128 aaKnown RBP10.32□□□□□ -0.76
ITGB4-210ENST00000584025 ATP5L2Q7Z4Y8 100 aa10.32□□□□□ -0.76
ITGB4-210ENST00000584025 UBE2WQ96B02 151 aa10.32□□□□□ -0.76
ITGB4-210ENST00000584025 TM2D2Q9BX73 214 aa10.32□□□□□ -0.76
ITGB4-210ENST00000584025 I3L3M4 83 aa10.31□□□□□ -0.76
ITGB4-210ENST00000584025 UBE2L6O14933 153 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms