RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 A0A0J9YY99 117 aa14.11□□□□□ -0.15
SRSF1-206ENST00000583741 BTF3P20290 206 aaKnown RBP14.11□□□□□ -0.15
SRSF1-206ENST00000583741 HOXA5P20719 270 aa14.11□□□□□ -0.15
SRSF1-206ENST00000583741 LINC00612Q8N6U2 182 aa14.11□□□□□ -0.15
SRSF1-206ENST00000583741 FRZBQ92765 325 aa14.11□□□□□ -0.15
SRSF1-206ENST00000583741 UPK3BQ9BT76 320 aa14.11□□□□□ -0.15
SRSF1-206ENST00000583741 TMEM191AQ9H0A3 160 aa14.11□□□□□ -0.15
SRSF1-206ENST00000583741 MRPL16Q9NX20 251 aaKnown RBP14.11□□□□□ -0.15
SRSF1-206ENST00000583741 TRAPPC1Q9Y5R8 145 aa14.11□□□□□ -0.15
SRSF1-206ENST00000583741 ESRGQ1W209 222 aa14.1□□□□□ -0.15
SRSF1-206ENST00000583741 PIK3CD-AS1Q5SR53 167 aa14.1□□□□□ -0.15
SRSF1-206ENST00000583741 TRGV1A0A0A0MS02 117 aa14.09□□□□□ -0.15
SRSF1-206ENST00000583741 EVI2AP22794 236 aa14.09□□□□□ -0.15
SRSF1-206ENST00000583741 MRPL18Q9H0U6 180 aaKnown RBP14.09□□□□□ -0.15
SRSF1-206ENST00000583741 RASL10AQ92737 203 aa14.08□□□□□ -0.16
SRSF1-206ENST00000583741 MYCBP2O75592 4640 aa14.07□□□□□ -0.16
SRSF1-206ENST00000583741 TRGC2P03986 189 aa14.07□□□□□ -0.16
SRSF1-206ENST00000583741 FABP9Q0Z7S8 132 aa14.07□□□□□ -0.16
SRSF1-206ENST00000583741 Q6ZTI0 123 aa14.07□□□□□ -0.16
SRSF1-206ENST00000583741 C14orf178Q8N769 122 aaPredicted RBP14.07□□□□□ -0.16
SRSF1-206ENST00000583741 DPH3P1Q9H4G8 78 aa14.07□□□□□ -0.16
SRSF1-206ENST00000583741 JPT2Q9H910 190 aa14.07□□□□□ -0.16
SRSF1-206ENST00000583741 MRPS16Q9Y3D3 137 aaKnown RBP14.07□□□□□ -0.16
SRSF1-206ENST00000583741 GAGE12BA1L429 117 aa14.06□□□□□ -0.16
SRSF1-206ENST00000583741 GAGE7O76087 117 aa14.06□□□□□ -0.16
SRSF1-206ENST00000583741 APCSP02743 223 aa14.06□□□□□ -0.16
SRSF1-206ENST00000583741 GAGE12FP0CL80 117 aa14.06□□□□□ -0.16
SRSF1-206ENST00000583741 GAGE12GP0CL81 117 aa14.06□□□□□ -0.16
SRSF1-206ENST00000583741 GAGE12IP0CL82 117 aa14.06□□□□□ -0.16
SRSF1-206ENST00000583741 SMIM17P0DL12 118 aa14.06□□□□□ -0.16
SRSF1-206ENST00000583741 SLAQ13239 276 aa14.06□□□□□ -0.16
SRSF1-206ENST00000583741 AMN1Q8IY45 258 aa14.06□□□□□ -0.16
SRSF1-206ENST00000583741 A8MWV9 139 aa14.06□□□□□ -0.16
SRSF1-206ENST00000583741 FAM104BQ5XKR9 115 aa14.06□□□□□ -0.16
SRSF1-206ENST00000583741 A0A087WWL8 130 aa14.05□□□□□ -0.16
SRSF1-206ENST00000583741 EPM2AB3EWF7 344 aa14.05□□□□□ -0.16
SRSF1-206ENST00000583741 LINC00315P59091 139 aa14.05□□□□□ -0.16
SRSF1-206ENST00000583741 FAM74A4Q5TZK3 123 aa14.05□□□□□ -0.16
SRSF1-206ENST00000583741 Q6ZRN7 208 aaPredicted RBP14.04□□□□□ -0.16
SRSF1-206ENST00000583741 KIF25-AS1Q9Y6Z4 181 aa14.04□□□□□ -0.16
SRSF1-206ENST00000583741 H3BNG1 76 aa14.03□□□□□ -0.16
SRSF1-206ENST00000583741 MGPP08493 103 aa14.03□□□□□ -0.16
SRSF1-206ENST00000583741 RAB4AP20338 218 aa14.03□□□□□ -0.16
SRSF1-206ENST00000583741 FUSP35637 526 aaKnown RBP eCLIP14.03□□□□□ -0.162e-8■■□□□ 12.8
SRSF1-206ENST00000583741 CFAP126Q5VTH2 177 aa14.03□□□□□ -0.16
SRSF1-206ENST00000583741 RNF185Q96GF1 192 aa14.03□□□□□ -0.16
SRSF1-206ENST00000583741 SAMD10Q9BYL1 202 aa14.03□□□□□ -0.16
SRSF1-206ENST00000583741 RS1O15537 224 aa14.02□□□□□ -0.16
SRSF1-206ENST00000583741 CRYGDP07320 174 aa14.02□□□□□ -0.16
SRSF1-206ENST00000583741 KIAA1644Q3SXP7 199 aa14.02□□□□□ -0.16
SRSF1-206ENST00000583741 MRPL51Q4U2R6 128 aaKnown RBP14.02□□□□□ -0.16
SRSF1-206ENST00000583741 TRGV2A0A075B6R0 118 aa14.01□□□□□ -0.17
SRSF1-206ENST00000583741 C1orf196B1AJZ1 125 aa14.01□□□□□ -0.17
SRSF1-206ENST00000583741 PHOX2AO14813 284 aa14.01□□□□□ -0.17
SRSF1-206ENST00000583741 VSIG2Q96IQ7 327 aa14.01□□□□□ -0.17
SRSF1-206ENST00000583741 A0A096LPF7 62 aa14□□□□□ -0.17
SRSF1-206ENST00000583741 RHODO00212 210 aa14□□□□□ -0.17
SRSF1-206ENST00000583741 OR4C5Q8NGB2 326 aa14□□□□□ -0.17
SRSF1-206ENST00000583741 TRAV4A0A0B4J268 109 aa13.99□□□□□ -0.17
SRSF1-206ENST00000583741 ZNF56Q15929 161 aa13.99□□□□□ -0.17
SRSF1-206ENST00000583741 F5H697 171 aa13.99□□□□□ -0.17
SRSF1-206ENST00000583741 CKS2P33552 79 aa13.99□□□□□ -0.17
SRSF1-206ENST00000583741 UFSP1Q6NVU6 142 aa13.99□□□□□ -0.17
SRSF1-206ENST00000583741 IGHV3-73A0A0B4J1V6 119 aa13.98□□□□□ -0.17
SRSF1-206ENST00000583741 D6R8Y8 96 aa13.98□□□□□ -0.17
SRSF1-206ENST00000583741 INAFM2P0DMQ5 153 aa13.98□□□□□ -0.17
SRSF1-206ENST00000583741 XGP55808 180 aa13.98□□□□□ -0.17
SRSF1-206ENST00000583741 ZFP2Q6ZN57 461 aa13.98□□□□□ -0.17
SRSF1-206ENST00000583741 ORMDL3Q8N138 153 aa13.98□□□□□ -0.17
SRSF1-206ENST00000583741 MRAP2Q96G30 205 aa13.98□□□□□ -0.17
SRSF1-206ENST00000583741 SRRM2Q9UQ35 2752 aaKnown RBP13.98□□□□□ -0.17
SRSF1-206ENST00000583741 TRAV26-2A0A0B4J265 109 aa13.97□□□□□ -0.17
SRSF1-206ENST00000583741 NCR2O95944 276 aa13.97□□□□□ -0.17
SRSF1-206ENST00000583741 IGHV3-53P01767 116 aa13.97□□□□□ -0.17
SRSF1-206ENST00000583741 PPBPP02775 128 aa13.97□□□□□ -0.17
SRSF1-206ENST00000583741 SRIP30626 198 aa13.97□□□□□ -0.17
SRSF1-206ENST00000583741 RAB5BP61020 215 aa13.97□□□□□ -0.17
SRSF1-206ENST00000583741 ZNF479Q96JC4 524 aa13.97□□□□□ -0.17
SRSF1-206ENST00000583741 C18orf15Q96N68 181 aa13.97□□□□□ -0.17
SRSF1-206ENST00000583741 VPS13BQ7Z7G8 4022 aa13.97□□□□□ -0.17
SRSF1-206ENST00000583741 SMKR1H3BMG3 65 aa13.96□□□□□ -0.17
SRSF1-206ENST00000583741 SUMO4Q6EEV6 95 aa13.96□□□□□ -0.17
SRSF1-206ENST00000583741 ALKBH7Q9BT30 221 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-206ENST00000583741 FLG2Q5D862 2391 aaPredicted RBP13.96□□□□□ -0.17
SRSF1-206ENST00000583741 SIVA1O15304 175 aa13.95□□□□□ -0.18
SRSF1-206ENST00000583741 PGPEP1Q9NXJ5 209 aa13.95□□□□□ -0.18
SRSF1-206ENST00000583741 CIDEAO60543 219 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 HIST1H2BKO60814 126 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 HIST1H2BJP06899 126 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 HIST1H2BOP23527 126 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 HIST1H2BBP33778 126 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 HIST1H2BDP58876 126 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 HIST1H2BCP62807 126 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 HIST2H2BEQ16778 126 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.94□□□□□ -0.18
SRSF1-206ENST00000583741 Q5VSD8 79 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 HIST1H2BHQ93079 126 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 PRELID3AQ96N28 172 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 HIST1H2BNQ99877 126 aa13.94□□□□□ -0.18
SRSF1-206ENST00000583741 HIST1H2BMQ99879 126 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms