RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 ARL3P36405 182 aa7.34□□□□□ -1.23
MKS1-212ENST00000583577 CLEC19AQ6UXS0 136 aa7.34□□□□□ -1.23
MKS1-212ENST00000583577 POM121L12Q8N7R1 296 aa7.34□□□□□ -1.23
MKS1-212ENST00000583577 NRACQ8N912 160 aa7.34□□□□□ -1.23
MKS1-212ENST00000583577 VPS25Q9BRG1 176 aa7.34□□□□□ -1.23
MKS1-212ENST00000583577 CHAC1Q9BUX1 264 aa7.34□□□□□ -1.23
MKS1-212ENST00000583577 SMIM2Q9BVW6 85 aa7.34□□□□□ -1.23
MKS1-212ENST00000583577 DPH3P1Q9H4G8 78 aa7.34□□□□□ -1.23
MKS1-212ENST00000583577 S4R3C0 116 aa7.34□□□□□ -1.23
MKS1-212ENST00000583577 VPS13DQ5THJ4 4388 aa7.33□□□□□ -1.24
MKS1-212ENST00000583577 TRAV8-2A0A0B4J237 113 aa7.33□□□□□ -1.24
MKS1-212ENST00000583577 H3BUT2 72 aa7.33□□□□□ -1.24
MKS1-212ENST00000583577 TRBV12-3P01733 135 aa7.33□□□□□ -1.24
MKS1-212ENST00000583577 ASIPP42127 132 aa7.33□□□□□ -1.24
MKS1-212ENST00000583577 Q6ZVH6 145 aa7.33□□□□□ -1.24
MKS1-212ENST00000583577 NEGR1Q7Z3B1 354 aa7.33□□□□□ -1.24
MKS1-212ENST00000583577 CEND1Q8N111 149 aa7.33□□□□□ -1.24
MKS1-212ENST00000583577 DLX4Q92988 240 aaPredicted RBP7.33□□□□□ -1.24
MKS1-212ENST00000583577 TOMM6Q96B49 74 aa7.33□□□□□ -1.24
MKS1-212ENST00000583577 C16orf92Q96LL3 132 aa7.33□□□□□ -1.24
MKS1-212ENST00000583577 DKK2Q9UBU2 259 aa7.33□□□□□ -1.24
MKS1-212ENST00000583577 ZNF256Q9Y2P7 627 aaPredicted RBP7.33□□□□□ -1.24
MKS1-212ENST00000583577 SPCS1Q9Y6A9 102 aa7.33□□□□□ -1.24
MKS1-212ENST00000583577 DNAH6Q9C0G6 4158 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 TRBV25-1A0A075B6N4 114 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 TMEM238LA0A1B0GVL6 79 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 A6NJY4 79 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 F8W1H4 67 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 K7EMT4 169 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 NXPH4O95158 308 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 LY6G6CO95867 125 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 ERCC8Q13216 396 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 C9orf66Q5T8R8 295 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 ZC2HC1BQ5TFG8 222 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 FAM19A4Q96LR4 140 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 ODF3Q96PU9 254 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 MSRB1Q9NZV6 116 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 UBR4Q5T4S7 5183 aa7.32□□□□□ -1.24
MKS1-212ENST00000583577 PRAC2D3DTV9 90 aa7.31□□□□□ -1.24
MKS1-212ENST00000583577 SMKR1H3BMG3 65 aa7.31□□□□□ -1.24
MKS1-212ENST00000583577 SAP30O75446 220 aa7.31□□□□□ -1.24
MKS1-212ENST00000583577 HLA-DMBP28068 263 aa7.31□□□□□ -1.24
MKS1-212ENST00000583577 SYNJ2BPP57105 145 aa7.31□□□□□ -1.24
MKS1-212ENST00000583577 SUMO2P61956 95 aaKnown RBP7.31□□□□□ -1.24
MKS1-212ENST00000583577 LYRM7Q5U5X0 104 aa7.31□□□□□ -1.24
MKS1-212ENST00000583577 LINC00476Q8WZB0 136 aa7.31□□□□□ -1.24
MKS1-212ENST00000583577 PEMTQ9UBM1 199 aa7.31□□□□□ -1.24
MKS1-212ENST00000583577 DNAH11Q96DT5 4516 aa7.3□□□□□ -1.24
MKS1-212ENST00000583577 A0A1B0GWB2 263 aa7.3□□□□□ -1.24
MKS1-212ENST00000583577 SOCS3O14543 225 aa7.3□□□□□ -1.24
MKS1-212ENST00000583577 SCGB1A1P11684 91 aa7.3□□□□□ -1.24
MKS1-212ENST00000583577 ID1P41134 155 aa7.3□□□□□ -1.24
MKS1-212ENST00000583577 INSL3P51460 131 aa7.3□□□□□ -1.24
MKS1-212ENST00000583577 GPHB5Q86YW7 130 aa7.3□□□□□ -1.24
MKS1-212ENST00000583577 PCP2Q8IVA1 136 aa7.3□□□□□ -1.24
MKS1-212ENST00000583577 C18orf15Q96N68 181 aa7.3□□□□□ -1.24
MKS1-212ENST00000583577 CSTL1Q9H114 145 aa7.3□□□□□ -1.24
MKS1-212ENST00000583577 OR11H12B2RN74 326 aa7.29□□□□□ -1.24
MKS1-212ENST00000583577 E9PLD3 99 aa7.29□□□□□ -1.24
MKS1-212ENST00000583577 GCSHP23434 173 aa7.29□□□□□ -1.24
MKS1-212ENST00000583577 S100A4P26447 101 aaKnown RBP7.29□□□□□ -1.24
MKS1-212ENST00000583577 HERVK_113P61574 105 aa7.29□□□□□ -1.24
MKS1-212ENST00000583577 RNF151Q2KHN1 245 aa7.29□□□□□ -1.24
MKS1-212ENST00000583577 RNF182Q8N6D2 247 aa7.29□□□□□ -1.24
MKS1-212ENST00000583577 OR11H2Q8NH07 326 aa7.29□□□□□ -1.24
MKS1-212ENST00000583577 TMEM141Q96I45 108 aa7.29□□□□□ -1.24
MKS1-212ENST00000583577 SCGB3A1Q96QR1 104 aa7.29□□□□□ -1.24
MKS1-212ENST00000583577 TM2D3Q9BRN9 247 aa7.29□□□□□ -1.24
MKS1-212ENST00000583577 PHLDA3Q9Y5J5 127 aa7.29□□□□□ -1.24
MKS1-212ENST00000583577 DNAH17Q9UFH2 4485 aa7.29□□□□□ -1.24
MKS1-212ENST00000583577 IGHV3-35A0A0C4DH35 117 aa7.28□□□□□ -1.24
MKS1-212ENST00000583577 MYMXA0A1B0GTQ4 84 aa7.28□□□□□ -1.24
MKS1-212ENST00000583577 LGALS9O00182 355 aa7.28□□□□□ -1.24
MKS1-212ENST00000583577 ZFAND2AQ8N6M9 145 aa7.28□□□□□ -1.24
MKS1-212ENST00000583577 NEXN-AS1Q8NBZ9 246 aa7.28□□□□□ -1.24
MKS1-212ENST00000583577 PHLDA1Q8WV24 401 aaPredicted RBP7.28□□□□□ -1.24
MKS1-212ENST00000583577 MRPL35Q9NZE8 188 aaKnown RBP7.28□□□□□ -1.24
MKS1-212ENST00000583577 C11orf21Q9P2W6 132 aa7.28□□□□□ -1.24
MKS1-212ENST00000583577 TP73-AS1Q9UF72 201 aa7.28□□□□□ -1.24
MKS1-212ENST00000583577 UFC1Q9Y3C8 167 aa7.28□□□□□ -1.24
MKS1-212ENST00000583577 CHTOPQ9Y3Y2 248 aaKnown RBP7.28□□□□□ -1.24
MKS1-212ENST00000583577 TRBV6-5A0A0K0K1A5 114 aa7.27□□□□□ -1.25
MKS1-212ENST00000583577 IGFL4Q6B9Z1 124 aa7.27□□□□□ -1.25
MKS1-212ENST00000583577 FOXI2Q6ZQN5 318 aa7.27□□□□□ -1.25
MKS1-212ENST00000583577 GTSCR1Q86UQ5 136 aa7.27□□□□□ -1.25
MKS1-212ENST00000583577 TIMM17AQ99595 171 aa7.27□□□□□ -1.25
MKS1-212ENST00000583577 KRTAP4-5Q9BYR2 181 aa7.27□□□□□ -1.25
MKS1-212ENST00000583577 VCX2Q9H322 139 aa7.27□□□□□ -1.25
MKS1-212ENST00000583577 FAT2Q9NYQ8 4349 aa7.27□□□□□ -1.25
MKS1-212ENST00000583577 DNAH2Q9P225 4427 aa7.26□□□□□ -1.25
MKS1-212ENST00000583577 IGKV2D-26A0A0A0MRZ7 120 aa7.26□□□□□ -1.25
MKS1-212ENST00000583577 KLLNB2CW77 178 aa7.26□□□□□ -1.25
MKS1-212ENST00000583577 H3BVH4 76 aa7.26□□□□□ -1.25
MKS1-212ENST00000583577 VCYO14598 125 aa7.26□□□□□ -1.25
MKS1-212ENST00000583577 IL17DQ8TAD2 202 aa7.26□□□□□ -1.25
MKS1-212ENST00000583577 DYNLRB2Q8TF09 96 aa7.26□□□□□ -1.25
MKS1-212ENST00000583577 ZNF479Q96JC4 524 aa7.26□□□□□ -1.25
MKS1-212ENST00000583577 DAZ1Q9NQZ3 744 aaKnown RBP7.26□□□□□ -1.25
MKS1-212ENST00000583577 CYSLTR1Q9Y271 337 aa7.26□□□□□ -1.25
MKS1-212ENST00000583577 HSPG2P98160 4391 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms