RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-225	ENST00000583438	SH3BGRL3	Q9H299	93 aa		4.97	□□□□□ -1.61
PPP4R1-225	ENST00000583438	KCNIP2	Q9NS61	270 aa		4.97	□□□□□ -1.61
PPP4R1-225	ENST00000583438	ARL2-SNX15	V9GYD0	113 aa		4.97	□□□□□ -1.61
PPP4R1-225	ENST00000583438	FAM240B	A0A1B0GVZ2	78 aa		4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438	KRBOX1	C9JBD0	128 aa		4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438	C17orf112	F2Z3M2	114 aa		4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438		M0R036	132 aa		4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438	TAAR5	O14804	337 aa		4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438	RPL12	P30050	165 aa	Known RBP	4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438	TAS2R45	P59539	299 aa		4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438	FAM74A4	Q5TZK3	123 aa		4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438		Q86TA4	180 aa		4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438	C9orf163	Q8N9P6	203 aa		4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438	GFRA4	Q9GZZ7	299 aa		4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438	IL36B	Q9NZH7	164 aa		4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438	EPDR1	Q9UM22	224 aa		4.96	□□□□□ -1.62
PPP4R1-225	ENST00000583438	MUC21	A0A0G2JKD1	596 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438		A8MWV9	139 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	CIDEA	O60543	219 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	SH2D1A	O60880	128 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	HLA-DQA1	P01909	254 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	ARMS2	P0C7Q2	107 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	CDC34	P49427	236 aa	Predicted RBP	4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	SMUG1	Q53HV7	270 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438		Q5BKY6	102 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	DNLZ	Q5SXM8	178 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	SMIM29	Q86T20	159 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	C15orf54	Q8N8G6	183 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	OR10G9	Q8NGN4	311 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	SFRP2	Q96HF1	295 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438	CCDC32	Q9BV29	185 aa		4.95	□□□□□ -1.62
PPP4R1-225	ENST00000583438		A0A087WWC5	75 aa		4.94	□□□□□ -1.62
PPP4R1-225	ENST00000583438	IFITM10	A6NMD0	228 aa		4.94	□□□□□ -1.62
PPP4R1-225	ENST00000583438	VPREB1	P12018	145 aa		4.94	□□□□□ -1.62
PPP4R1-225	ENST00000583438	ATP6V0C	P27449	155 aa		4.94	□□□□□ -1.62
PPP4R1-225	ENST00000583438	DEFA3	P59666	94 aa		4.94	□□□□□ -1.62
PPP4R1-225	ENST00000583438	RPL19	P84098	196 aa	Known RBP	4.94	□□□□□ -1.62
PPP4R1-225	ENST00000583438	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.94	□□□□□ -1.62
PPP4R1-225	ENST00000583438	PRR27	Q6MZM9	219 aa		4.94	□□□□□ -1.62
PPP4R1-225	ENST00000583438	HSD17B11	Q8NBQ5	300 aa		4.94	□□□□□ -1.62
PPP4R1-225	ENST00000583438	OR2G3	Q8NGZ4	309 aa		4.94	□□□□□ -1.62
PPP4R1-225	ENST00000583438	PRR34	Q9NV39	138 aa		4.94	□□□□□ -1.62
PPP4R1-225	ENST00000583438	TMSB15B	A0A087X1C1	80 aa		4.93	□□□□□ -1.62
PPP4R1-225	ENST00000583438	TRBV6-8	A0A0A6YYG3	113 aa		4.93	□□□□□ -1.62
PPP4R1-225	ENST00000583438		B4DEV8	164 aa		4.93	□□□□□ -1.62
PPP4R1-225	ENST00000583438		M0R381	172 aa		4.93	□□□□□ -1.62
PPP4R1-225	ENST00000583438	OR10G8	Q8NGN5	311 aa		4.93	□□□□□ -1.62
PPP4R1-225	ENST00000583438	ZNF471	Q9BX82	626 aa	Predicted RBP	4.93	□□□□□ -1.62
PPP4R1-225	ENST00000583438	TRBV7-3	A0A075B6L6	115 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	IGLV5-45	A0A087WSX0	123 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438		A0A087WYN8	130 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	MUC21	A0A140T8X8	626 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	SERTM2	A0A1B0GWG4	89 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438		A0A1W2PPV4	95 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	INMT-MINDY4	F8WBC2	141 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	PHOX2A	O14813	284 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	UPK1B	O75841	260 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	FGF8	P55075	233 aa	Predicted RBP	4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	UBE2G2	P60604	165 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	PNRC1	Q12796	327 aa	Predicted RBP	4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	GAGE6	Q13070	117 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	FAM74A1	Q5RGS3	127 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438		Q6ZRU5	148 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	COX8C	Q7Z4L0	72 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	OR10AG1	Q8NH19	301 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	SCGB1C1	Q8TD33	95 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	SPACA4	Q8TDM5	124 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	RMI2	Q96E14	147 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	MARVELD1	Q9BSK0	173 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	NDFIP1	Q9BT67	221 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	CHCHD7	Q9BUK0	85 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	KIF25-AS1	Q9Y6Z4	181 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	MUC2	Q02817	5179 aa		4.92	□□□□□ -1.62
PPP4R1-225	ENST00000583438	IGLV4-60	A0A075B6I1	120 aa		4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438	IGLV10-54	A0A075B6I4	117 aa		4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438		A0A087WX48	190 aa		4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438	FAM74A7	A6NL05	159 aa		4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438	FABP5P3	A8MUU1	101 aa		4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438	PEX7	O00628	323 aa		4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438	PTTG1	O95997	202 aa		4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438	ANG	P03950	147 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438	S100A4	P26447	101 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438	RBX1	P62877	108 aa		4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438	ZNF674	Q2M3X9	581 aa		4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438	C20orf203	Q8NBC4	194 aa		4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438	OR11H4	Q8NGC9	324 aa		4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438	URGCP-MRPS24	S4R325	110 aa		4.91	□□□□□ -1.62
PPP4R1-225	ENST00000583438		G3V3Q6	166 aa		4.9	□□□□□ -1.63
PPP4R1-225	ENST00000583438	KRTAP10-8	P60410	259 aa		4.9	□□□□□ -1.63
PPP4R1-225	ENST00000583438	ZFP69	Q49AA0	526 aa		4.9	□□□□□ -1.63
PPP4R1-225	ENST00000583438	LINC00269	Q8N2A0	174 aa		4.9	□□□□□ -1.63
PPP4R1-225	ENST00000583438	C15orf56	Q8N910	161 aa		4.9	□□□□□ -1.63
PPP4R1-225	ENST00000583438	ENKUR	Q8TC29	256 aa		4.9	□□□□□ -1.63
PPP4R1-225	ENST00000583438	PSMG3	Q9BT73	122 aa	Predicted RBP	4.9	□□□□□ -1.63
PPP4R1-225	ENST00000583438	PLAC8	Q9NZF1	115 aa		4.9	□□□□□ -1.63
PPP4R1-225	ENST00000583438	TRBV10-1	A0A0K0K1A3	114 aa		4.89	□□□□□ -1.63
PPP4R1-225	ENST00000583438		A0A1W2PRE2	83 aa		4.89	□□□□□ -1.63
PPP4R1-225	ENST00000583438	TMEM262	E9PQX1	116 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms