RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 NOP10Q9NPE3 64 aaKnown RBP12.64□□□□□ -0.39
SNX11-212ENST00000583320 MRPL16Q9NX20 251 aaKnown RBP12.64□□□□□ -0.39
SNX11-212ENST00000583320 D6R8Y8 96 aa12.63□□□□□ -0.39
SNX11-212ENST00000583320 CIDEAO60543 219 aa12.63□□□□□ -0.39
SNX11-212ENST00000583320 PRELID3AQ96N28 172 aa12.63□□□□□ -0.39
SNX11-212ENST00000583320 JPT2Q9H910 190 aa12.63□□□□□ -0.39
SNX11-212ENST00000583320 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
SNX11-212ENST00000583320 PPP1R17O96001 155 aa12.62□□□□□ -0.39
SNX11-212ENST00000583320 NDUFA6P56556 154 aa12.62□□□□□ -0.39
SNX11-212ENST00000583320 CFAP126Q5VTH2 177 aa12.62□□□□□ -0.39
SNX11-212ENST00000583320 ZFP2Q6ZN57 461 aa12.62□□□□□ -0.39
SNX11-212ENST00000583320 LINC00612Q8N6U2 182 aa12.62□□□□□ -0.39
SNX11-212ENST00000583320 C18orf32Q8TCD1 76 aa12.62□□□□□ -0.39
SNX11-212ENST00000583320 C18orf15Q96N68 181 aa12.62□□□□□ -0.39
SNX11-212ENST00000583320 NACAE9PAV3 2078 aa12.61□□□□□ -0.39
SNX11-212ENST00000583320 A0A087WWL8 130 aa12.61□□□□□ -0.39
SNX11-212ENST00000583320 LYRM9A8MSI8 78 aa12.61□□□□□ -0.39
SNX11-212ENST00000583320 MGPP08493 103 aa12.61□□□□□ -0.39
SNX11-212ENST00000583320 UFSP1Q6NVU6 142 aa12.61□□□□□ -0.39
SNX11-212ENST00000583320 Q8NAQ8 132 aa12.61□□□□□ -0.39
SNX11-212ENST00000583320 SAMD10Q9BYL1 202 aa12.61□□□□□ -0.39
SNX11-212ENST00000583320 TRAV4A0A0B4J268 109 aa12.6□□□□□ -0.39
SNX11-212ENST00000583320 IGHV4-28A0A0C4DH34 117 aa12.6□□□□□ -0.39
SNX11-212ENST00000583320 Q6ZTI0 123 aa12.6□□□□□ -0.39
SNX11-212ENST00000583320 C5orf52A6NGY3 159 aa12.59□□□□□ -0.39
SNX11-212ENST00000583320 FAM74A4Q5TZK3 123 aa12.59□□□□□ -0.39
SNX11-212ENST00000583320 OR4C5Q8NGB2 326 aa12.59□□□□□ -0.39
SNX11-212ENST00000583320 PRSS47A8MTI9 375 aa12.58□□□□□ -0.4
SNX11-212ENST00000583320 SMKR1H3BMG3 65 aa12.58□□□□□ -0.4
SNX11-212ENST00000583320 H7C1H1 209 aa12.58□□□□□ -0.4
SNX11-212ENST00000583320 TNFRSF6BO95407 300 aa12.58□□□□□ -0.4
SNX11-212ENST00000583320 NCR2O95944 276 aa12.58□□□□□ -0.4
SNX11-212ENST00000583320 BAGE3Q86Y29 109 aa12.58□□□□□ -0.4
SNX11-212ENST00000583320 NRACQ8N912 160 aa12.58□□□□□ -0.4
SNX11-212ENST00000583320 TEX48A0A1B0GUV7 120 aa12.57□□□□□ -0.4
SNX11-212ENST00000583320 F5H697 171 aa12.57□□□□□ -0.4
SNX11-212ENST00000583320 M0R2N4 97 aa12.57□□□□□ -0.4
SNX11-212ENST00000583320 NPYP01303 97 aa12.57□□□□□ -0.4
SNX11-212ENST00000583320 ESDP10768 282 aa12.57□□□□□ -0.4
SNX11-212ENST00000583320 HOXA5P20719 270 aa12.57□□□□□ -0.4
SNX11-212ENST00000583320 ZNF56Q15929 161 aa12.57□□□□□ -0.4
SNX11-212ENST00000583320 SUMO4Q6EEV6 95 aa12.57□□□□□ -0.4
SNX11-212ENST00000583320 C20orf78Q9BR46 151 aa12.57□□□□□ -0.4
SNX11-212ENST00000583320 MAP1LC3AQ9H492 121 aa12.57□□□□□ -0.4
SNX11-212ENST00000583320 LRP1BQ9NZR2 4599 aa12.57□□□□□ -0.4
SNX11-212ENST00000583320 APOBP04114 4563 aaKnown RBP12.56□□□□□ -0.4
SNX11-212ENST00000583320 GAGE12BA1L429 117 aa12.56□□□□□ -0.4
SNX11-212ENST00000583320 M0QY20 66 aa12.56□□□□□ -0.4
SNX11-212ENST00000583320 GAGE7O76087 117 aa12.56□□□□□ -0.4
SNX11-212ENST00000583320 IGHV3-53P01767 116 aa12.56□□□□□ -0.4
SNX11-212ENST00000583320 GAGE12FP0CL80 117 aa12.56□□□□□ -0.4
SNX11-212ENST00000583320 GAGE12GP0CL81 117 aa12.56□□□□□ -0.4
SNX11-212ENST00000583320 GAGE12IP0CL82 117 aa12.56□□□□□ -0.4
SNX11-212ENST00000583320 EMP1P54849 157 aa12.56□□□□□ -0.4
SNX11-212ENST00000583320 SNRPEP62304 92 aaKnown RBP12.56□□□□□ -0.4
SNX11-212ENST00000583320 DKK2Q9UBU2 259 aa12.56□□□□□ -0.4
SNX11-212ENST00000583320 TRGV2A0A075B6R0 118 aa12.55□□□□□ -0.4
SNX11-212ENST00000583320 TRAV26-2A0A0B4J265 109 aa12.55□□□□□ -0.4
SNX11-212ENST00000583320 TRBV6-5A0A0K0K1A5 114 aa12.55□□□□□ -0.4
SNX11-212ENST00000583320 GAS8-AS1O95177 125 aa12.55□□□□□ -0.4
SNX11-212ENST00000583320 GATA1P15976 413 aaPredicted RBP12.55□□□□□ -0.4
SNX11-212ENST00000583320 RPL32P62910 135 aaKnown RBP12.55□□□□□ -0.4
SNX11-212ENST00000583320 IQCJQ1A5X6 159 aa12.55□□□□□ -0.4
SNX11-212ENST00000583320 CHCHD1Q96BP2 118 aaKnown RBP12.55□□□□□ -0.4
SNX11-212ENST00000583320 FAM222AQ5U5X8 452 aa12.54□□□□□ -0.4
SNX11-212ENST00000583320 Q6ZTC4 211 aa12.54□□□□□ -0.4
SNX11-212ENST00000583320 SERF1AO75920 110 aa12.53□□□□□ -0.4
SNX11-212ENST00000583320 SPART-AS1P0CW21 52 aa12.53□□□□□ -0.4
SNX11-212ENST00000583320 LINC00310P59036 64 aa12.53□□□□□ -0.4
SNX11-212ENST00000583320 NIT1Q86X76 327 aa12.53□□□□□ -0.4
SNX11-212ENST00000583320 PRSS3P2Q8NHM4 247 aa12.53□□□□□ -0.4
SNX11-212ENST00000583320 ZNF479Q96JC4 524 aa12.53□□□□□ -0.4
SNX11-212ENST00000583320 NXT2Q9NPJ8 142 aaKnown RBP12.53□□□□□ -0.4
SNX11-212ENST00000583320 NIT2Q9NQR4 276 aa12.53□□□□□ -0.4
SNX11-212ENST00000583320 LINC00614P0C842 121 aa12.52□□□□□ -0.41
SNX11-212ENST00000583320 PMCHP20382 165 aa12.52□□□□□ -0.41
SNX11-212ENST00000583320 SUMO2P61956 95 aaKnown RBP12.52□□□□□ -0.41
SNX11-212ENST00000583320 HIST3H2BBQ8N257 126 aa12.52□□□□□ -0.41
SNX11-212ENST00000583320 DNAJC30Q96LL9 226 aa12.52□□□□□ -0.41
SNX11-212ENST00000583320 IGHV3-73A0A0B4J1V6 119 aa12.51□□□□□ -0.41
SNX11-212ENST00000583320 LINC01546A6NGU7 62 aa12.51□□□□□ -0.41
SNX11-212ENST00000583320 FA2HQ7L5A8 372 aa12.51□□□□□ -0.41
SNX11-212ENST00000583320 Q8N8P6 123 aa12.51□□□□□ -0.41
SNX11-212ENST00000583320 RPL39LQ96EH5 51 aaKnown RBP12.51□□□□□ -0.41
SNX11-212ENST00000583320 URB1-AS1Q96HZ7 61 aa12.51□□□□□ -0.41
SNX11-212ENST00000583320 PACRGQ96M98 296 aaPredicted RBP12.51□□□□□ -0.41
SNX11-212ENST00000583320 SMIM2Q9BVW6 85 aa12.51□□□□□ -0.41
SNX11-212ENST00000583320 ST20Q9HBF5 79 aa12.51□□□□□ -0.41
SNX11-212ENST00000583320 IGLV2-18A0A075B6J9 118 aa12.5□□□□□ -0.41
SNX11-212ENST00000583320 TRBV10-1A0A0K0K1A3 114 aa12.5□□□□□ -0.41
SNX11-212ENST00000583320 LOC389332A0A1B0GUA5 103 aa12.5□□□□□ -0.41
SNX11-212ENST00000583320 K7EMI3 77 aa12.5□□□□□ -0.41
SNX11-212ENST00000583320 DEFB130BP0DP73 79 aa12.5□□□□□ -0.41
SNX11-212ENST00000583320 DEFB130AP0DP74 79 aa12.5□□□□□ -0.41
SNX11-212ENST00000583320 IFI27P40305 119 aaPredicted RBP12.5□□□□□ -0.41
SNX11-212ENST00000583320 TRAV10A0A0B4J240 114 aa12.49□□□□□ -0.41
SNX11-212ENST00000583320 TRBV6-4A0A1B0GX49 114 aa12.49□□□□□ -0.41
SNX11-212ENST00000583320 NUPR1O60356 82 aa12.49□□□□□ -0.41
SNX11-212ENST00000583320 POLR2KP53803 58 aaKnown RBP12.49□□□□□ -0.41
SNX11-212ENST00000583320 DAD1P61803 113 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms