RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 FMC1Q96HJ9 113 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 SGK494Q96LW2 274 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 GSN-AS1Q9NRJ2 163 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 RPH3ALQ9UNE2 315 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 HHLA3Q9XRX5 114 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 TRAPPC1Q9Y5R8 145 aa5.09□□□□□ -1.59
CCDC47-205ENST00000582331 TRAV8-1A0A0A6YYK1 113 aa5.08□□□□□ -1.6
CCDC47-205ENST00000582331 DIRC3C9JPN6 131 aa5.08□□□□□ -1.6
CCDC47-205ENST00000582331 ZNF253O75346 499 aa5.08□□□□□ -1.6
CCDC47-205ENST00000582331 LEPP41159 167 aa5.08□□□□□ -1.6
CCDC47-205ENST00000582331 GOLT1AQ6ZVE7 132 aa5.08□□□□□ -1.6
CCDC47-205ENST00000582331 TMEM183AQ8IXX5 376 aa5.08□□□□□ -1.6
CCDC47-205ENST00000582331 TMEM75Q8N9X5 138 aa5.08□□□□□ -1.6
CCDC47-205ENST00000582331 CMTM2Q8TAZ6 248 aa5.08□□□□□ -1.6
CCDC47-205ENST00000582331 C8orf49Q96NF6 230 aa5.08□□□□□ -1.6
CCDC47-205ENST00000582331 C12orf57Q99622 126 aa5.08□□□□□ -1.6
CCDC47-205ENST00000582331 XKRY2A2RUG3 117 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 PRAC2D3DTV9 90 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 M0R3E3 92 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 SPINK4O60575 86 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 SMIM6P0DI80 62 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 CT45A10P0DMU9 189 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 SRIP30626 198 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 TCL1AP56279 114 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 FHL2Q14192 279 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 COX19Q49B96 90 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 CT83Q5H943 113 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 TMEM136Q6ZRR5 245 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 C11orf72Q8NBR9 251 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 TSKUQ8WUA8 353 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 ODF3Q96PU9 254 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 SLC50A1Q9BRV3 221 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 GNB1LQ9BYB4 327 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 ZNF331Q9NQX6 463 aaPredicted RBP5.07□□□□□ -1.6
CCDC47-205ENST00000582331 PSG8Q9UQ74 426 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 ZFP30Q9Y2G7 519 aa5.07□□□□□ -1.6
CCDC47-205ENST00000582331 TRGV4A0A0C4DH28 118 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 SERTM2A0A1B0GWG4 89 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 IBA57-AS1B1ANH7 110 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 K7EQD1 137 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 KRTAP10-4P60372 401 aaPredicted RBP5.06□□□□□ -1.6
CCDC47-205ENST00000582331 ZNF415Q09FC8 603 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 ANXA2RQ3ZCQ2 193 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 PRR27Q6MZM9 219 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 WDR73Q6P4I2 378 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 SCXQ7RTU7 201 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 COX8CQ7Z4L0 72 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 PRNTQ86SH4 94 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 NUP35Q8NFH5 326 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 OR10D4PQ8NGN7 298 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 ZC2HC1AQ96GY0 325 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 HIST1H2BLQ99880 126 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 RPP21Q9H633 154 aaKnown RBP5.06□□□□□ -1.6
CCDC47-205ENST00000582331 AAMDCQ9H7C9 122 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 TP53TG3Q9ULZ0 132 aa5.06□□□□□ -1.6
CCDC47-205ENST00000582331 A0A1B0GXF2 115 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 C7orf71A4D174 169 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 A8MWL6 223 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 K7EQM0 130 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 NUPR1O60356 82 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 P01737 135 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 MT-ND6P03923 174 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 GYPEP15421 78 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 S100A2P29034 98 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 CSN1S1P47710 185 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 CRIP1P50238 77 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 FOXA3P55318 350 aaPredicted RBP5.05□□□□□ -1.6
CCDC47-205ENST00000582331 RPL19P84098 196 aaKnown RBP5.05□□□□□ -1.6
CCDC47-205ENST00000582331 PDZD11Q5EBL8 140 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 PYY3Q5JQD4 70 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 MRPL54Q6P161 138 aaKnown RBP5.05□□□□□ -1.6
CCDC47-205ENST00000582331 RASL11AQ6T310 242 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 GTSF1Q8WW33 167 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 VGLL1Q99990 258 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 GFRA4Q9GZZ7 299 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 Q9HAA7 133 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 MRPL16Q9NX20 251 aaKnown RBP5.05□□□□□ -1.6
CCDC47-205ENST00000582331 NAT8BQ9UHF3 227 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 PKHD1L1Q86WI1 4243 aa5.05□□□□□ -1.6
CCDC47-205ENST00000582331 IGKV2-40A0A087WW87 121 aaPredicted RBP5.04□□□□□ -1.6
CCDC47-205ENST00000582331 IGHV3-38A0A0C4DH36 116 aa5.04□□□□□ -1.6
CCDC47-205ENST00000582331 FAM231BA6NCW3 169 aa5.04□□□□□ -1.6
CCDC47-205ENST00000582331 FBLL1A6NHQ2 334 aaKnown RBP5.04□□□□□ -1.6
CCDC47-205ENST00000582331 HIGD1CA8MV81 97 aa5.04□□□□□ -1.6
CCDC47-205ENST00000582331 IGKV2D-40P01614 121 aaPredicted RBP5.04□□□□□ -1.6
CCDC47-205ENST00000582331 HLA-DQA1P01909 254 aa5.04□□□□□ -1.6
CCDC47-205ENST00000582331 ORM1P02763 201 aa5.04□□□□□ -1.6
CCDC47-205ENST00000582331 ESDP10768 282 aa5.04□□□□□ -1.6
CCDC47-205ENST00000582331 FABP4P15090 132 aa5.04□□□□□ -1.6
CCDC47-205ENST00000582331 Q0VG73 95 aa5.04□□□□□ -1.6
CCDC47-205ENST00000582331 ATP5L2Q7Z4Y8 100 aa5.04□□□□□ -1.6
CCDC47-205ENST00000582331 DAZAP1Q96EP5 407 aaKnown RBP5.04□□□□□ -1.6
CCDC47-205ENST00000582331 TM2D2Q9BX73 214 aa5.04□□□□□ -1.6
CCDC47-205ENST00000582331 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
CCDC47-205ENST00000582331 GRIFINA4D1Z8 144 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 RBAKDNA6NC62 111 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 F2Z2F3 143 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 RS1O15537 224 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 CRISP2P16562 243 aa5.03□□□□□ -1.6
CCDC47-205ENST00000582331 RNASE4P34096 147 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms