RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 ACTR3CQ9C0K3 210 aaPredicted RBP11.98□□□□□ -0.49
NDEL1-209ENST00000580738 VAX2Q9UIW0 290 aa11.98□□□□□ -0.49
NDEL1-209ENST00000580738 ZFP30Q9Y2G7 519 aa11.98□□□□□ -0.49
NDEL1-209ENST00000580738 TRBV6-1A0A0K0K1D8 114 aa11.97□□□□□ -0.49
NDEL1-209ENST00000580738 SSNA1O43805 119 aa11.97□□□□□ -0.49
NDEL1-209ENST00000580738 MBP02144 154 aa11.97□□□□□ -0.49
NDEL1-209ENST00000580738 OR10AG1Q8NH19 301 aa11.97□□□□□ -0.49
NDEL1-209ENST00000580738 LPAP08519 4548 aa11.96□□□□□ -0.49
NDEL1-209ENST00000580738 TRBV25-1A0A075B6N4 114 aa11.96□□□□□ -0.49
NDEL1-209ENST00000580738 MUC21A0A0G2JKD1 596 aa11.96□□□□□ -0.49
NDEL1-209ENST00000580738 COX6A2Q02221 97 aa11.96□□□□□ -0.49
NDEL1-209ENST00000580738 TMEM97Q5BJF2 176 aa11.96□□□□□ -0.49
NDEL1-209ENST00000580738 C20orf203Q8NBC4 194 aa11.96□□□□□ -0.49
NDEL1-209ENST00000580738 F5H697 171 aa11.95□□□□□ -0.5
NDEL1-209ENST00000580738 SERF2P84101 59 aa11.95□□□□□ -0.5
NDEL1-209ENST00000580738 ZNF726P1Q15940 193 aa11.95□□□□□ -0.5
NDEL1-209ENST00000580738 MAJINQ3KP22 176 aa11.95□□□□□ -0.5
NDEL1-209ENST00000580738 LYPD6BQ8NI32 183 aa11.95□□□□□ -0.5
NDEL1-209ENST00000580738 HIST1H2BAQ96A08 127 aa11.95□□□□□ -0.5
NDEL1-209ENST00000580738 GFRA4Q9GZZ7 299 aa11.95□□□□□ -0.5
NDEL1-209ENST00000580738 TRAV8-4A0A0B4J246 113 aa11.94□□□□□ -0.5
NDEL1-209ENST00000580738 MUC21A0A140T8X8 626 aa11.94□□□□□ -0.5
NDEL1-209ENST00000580738 FAM74A7A6NL05 159 aa11.94□□□□□ -0.5
NDEL1-209ENST00000580738 P01737 135 aa11.94□□□□□ -0.5
NDEL1-209ENST00000580738 DEFA3P59666 94 aa11.94□□□□□ -0.5
NDEL1-209ENST00000580738 IQCJQ1A5X6 159 aa11.94□□□□□ -0.5
NDEL1-209ENST00000580738 PRSS3P2Q8NHM4 247 aa11.94□□□□□ -0.5
NDEL1-209ENST00000580738 TNFSF18Q9UNG2 199 aa11.94□□□□□ -0.5
NDEL1-209ENST00000580738 IGLV4-60A0A075B6I1 120 aa11.93□□□□□ -0.5
NDEL1-209ENST00000580738 IGKV2-24A0A0C4DH68 120 aa11.93□□□□□ -0.5
NDEL1-209ENST00000580738 FMC1Q96HJ9 113 aa11.93□□□□□ -0.5
NDEL1-209ENST00000580738 IGHV1-24A0A0C4DH33 117 aa11.92□□□□□ -0.5
NDEL1-209ENST00000580738 UBE2G1P62253 170 aa11.92□□□□□ -0.5
NDEL1-209ENST00000580738 REG3GQ6UW15 175 aa11.92□□□□□ -0.5
NDEL1-209ENST00000580738 MARVELD1Q9BSK0 173 aa11.92□□□□□ -0.5
NDEL1-209ENST00000580738 ZNF471Q9BX82 626 aaPredicted RBP11.92□□□□□ -0.5
NDEL1-209ENST00000580738 LTAP01374 205 aa11.91□□□□□ -0.5
NDEL1-209ENST00000580738 SSTP61278 116 aa11.91□□□□□ -0.5
NDEL1-209ENST00000580738 IFITM3Q01628 133 aa11.91□□□□□ -0.5
NDEL1-209ENST00000580738 SPINK6Q6UWN8 80 aa11.91□□□□□ -0.5
NDEL1-209ENST00000580738 STPG4Q8N801 248 aa11.91□□□□□ -0.5
NDEL1-209ENST00000580738 C15orf56Q8N910 161 aa11.91□□□□□ -0.5
NDEL1-209ENST00000580738 A6NHS1 94 aa11.9□□□□□ -0.5
NDEL1-209ENST00000580738 NDUFS6O75380 124 aaKnown RBP11.9□□□□□ -0.5
NDEL1-209ENST00000580738 NKX6-2Q9C056 277 aaPredicted RBP11.9□□□□□ -0.5
NDEL1-209ENST00000580738 UPK1BO75841 260 aa11.89□□□□□ -0.51
NDEL1-209ENST00000580738 GZMBP10144 247 aa11.89□□□□□ -0.51
NDEL1-209ENST00000580738 RPS10P46783 165 aaKnown RBP11.89□□□□□ -0.51
NDEL1-209ENST00000580738 CTXND1A0A1B0GTU2 59 aa11.88□□□□□ -0.51
NDEL1-209ENST00000580738 A0A1B0GUV1 79 aa11.88□□□□□ -0.51
NDEL1-209ENST00000580738 SNAI2O43623 268 aa11.88□□□□□ -0.51
NDEL1-209ENST00000580738 SRSF9Q13242 221 aaKnown RBP eCLIP11.88□□□□□ -0.51
NDEL1-209ENST00000580738 SPANXN1Q5VSR9 72 aa11.88□□□□□ -0.51
NDEL1-209ENST00000580738 INO80EQ8NBZ0 244 aaPredicted RBP11.88□□□□□ -0.51
NDEL1-209ENST00000580738 SSBP4Q9BWG4 385 aaPredicted RBP11.88□□□□□ -0.51
NDEL1-209ENST00000580738 MUC2Q02817 5179 aa11.87□□□□□ -0.51
NDEL1-209ENST00000580738 HIGD2BQ4VC39 106 aa11.87□□□□□ -0.51
NDEL1-209ENST00000580738 AQP10Q96PS8 301 aa11.87□□□□□ -0.51
NDEL1-209ENST00000580738 A0A096LNI7 61 aa11.86□□□□□ -0.51
NDEL1-209ENST00000580738 GAGE12HA6NDE8 117 aa11.85□□□□□ -0.51
NDEL1-209ENST00000580738 M0QY20 66 aa11.85□□□□□ -0.51
NDEL1-209ENST00000580738 OR5AL1P0C617 328 aa11.85□□□□□ -0.51
NDEL1-209ENST00000580738 S100ZQ8WXG8 99 aa11.85□□□□□ -0.51
NDEL1-209ENST00000580738 TMEM243Q9BU79 118 aa11.85□□□□□ -0.51
NDEL1-209ENST00000580738 CXCL1P09341 107 aa11.84□□□□□ -0.51
NDEL1-209ENST00000580738 SMIM17P0DL12 118 aa11.84□□□□□ -0.51
NDEL1-209ENST00000580738 SULT1A2P50226 295 aa11.84□□□□□ -0.51
NDEL1-209ENST00000580738 RPL7L1Q6DKI1 246 aaKnown RBP11.84□□□□□ -0.51
NDEL1-209ENST00000580738 CFAP161Q6P656 301 aa11.84□□□□□ -0.51
NDEL1-209ENST00000580738 KRTAP9-2Q9BYQ4 174 aa11.84□□□□□ -0.51
NDEL1-209ENST00000580738 LINC00299Q6ZSB3 139 aa11.83□□□□□ -0.52
NDEL1-209ENST00000580738 AKR1C3P42330 323 aa11.82□□□□□ -0.52
NDEL1-209ENST00000580738 NKX2-5P52952 324 aaPredicted RBP11.82□□□□□ -0.52
NDEL1-209ENST00000580738 CST9LP1Q5W188 147 aa11.82□□□□□ -0.52
NDEL1-209ENST00000580738 AP1S3Q96PC3 154 aa11.82□□□□□ -0.52
NDEL1-209ENST00000580738 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
NDEL1-209ENST00000580738 MGPP08493 103 aa11.81□□□□□ -0.52
NDEL1-209ENST00000580738 NDUFA13Q9P0J0 144 aa11.81□□□□□ -0.52
NDEL1-209ENST00000580738 Q5BKY6 102 aa11.8□□□□□ -0.52
NDEL1-209ENST00000580738 SUMO4Q6EEV6 95 aa11.8□□□□□ -0.52
NDEL1-209ENST00000580738 Q6ZRP5 223 aa11.8□□□□□ -0.52
NDEL1-209ENST00000580738 MAP1LC3B2A6NCE7 125 aa11.79□□□□□ -0.52
NDEL1-209ENST00000580738 FHITP49789 147 aa11.79□□□□□ -0.52
NDEL1-209ENST00000580738 STOML3Q8TAV4 291 aa11.79□□□□□ -0.52
NDEL1-209ENST00000580738 TCEAL7Q9BRU2 100 aa11.79□□□□□ -0.52
NDEL1-209ENST00000580738 MLST8Q9BVC4 326 aa11.79□□□□□ -0.52
NDEL1-209ENST00000580738 MAP1LC3BQ9GZQ8 125 aa11.79□□□□□ -0.52
NDEL1-209ENST00000580738 GVQW2A0A096LPI5 108 aaPredicted RBP11.78□□□□□ -0.52
NDEL1-209ENST00000580738 H7C1H1 209 aa11.78□□□□□ -0.52
NDEL1-209ENST00000580738 UBE2L6O14933 153 aa11.78□□□□□ -0.52
NDEL1-209ENST00000580738 AKR1C8PQ5T2L2 129 aa11.78□□□□□ -0.52
NDEL1-209ENST00000580738 CHCHD10Q8WYQ3 142 aaPredicted RBP11.77□□□□□ -0.53
NDEL1-209ENST00000580738 BORCS7-ASMTA0A0B4J1R7 106 aa11.76□□□□□ -0.53
NDEL1-209ENST00000580738 PAGE4O60829 102 aa11.76□□□□□ -0.53
NDEL1-209ENST00000580738 BAGE2Q86Y30 109 aa11.76□□□□□ -0.53
NDEL1-209ENST00000580738 PGLYRP4Q96LB8 373 aa11.76□□□□□ -0.53
NDEL1-209ENST00000580738 LINC00474Q9P2X8 69 aa11.76□□□□□ -0.53
NDEL1-209ENST00000580738 AMTP48728 403 aa11.75□□□□□ -0.53
NDEL1-209ENST00000580738 RASL11AQ6T310 242 aa11.75□□□□□ -0.53
NDEL1-209ENST00000580738 ALG5Q9Y673 324 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms