RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 IGKV2D-24A0A075B6R9 120 aa9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 F2Z2F3 143 aa9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 PDE6DO43924 150 aa9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 SMR3BP02814 79 aaPredicted RBP9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 IGLC6P0CF74 106 aa9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 TAGLN2P37802 199 aaKnown RBP9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 CCL20P78556 96 aa9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 RPL19P84098 196 aaKnown RBP9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 ZNF56Q15929 161 aa9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 MIAQ16674 131 aa9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 BAALCQ8WXS3 180 aa9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 UBE2WQ96B02 151 aa9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 PRR34Q9NV39 138 aa9.51□□□□□ -0.89
SMARCE1-216ENST00000580419 XKRY2A2RUG3 117 aa9.5□□□□□ -0.89
SMARCE1-216ENST00000580419 C19orf71A6NCJ1 209 aa9.5□□□□□ -0.89
SMARCE1-216ENST00000580419 H7C1H1 209 aa9.5□□□□□ -0.89
SMARCE1-216ENST00000580419 WDR73Q6P4I2 378 aa9.5□□□□□ -0.89
SMARCE1-216ENST00000580419 C1orf43Q9BWL3 253 aa9.5□□□□□ -0.89
SMARCE1-216ENST00000580419 IGLV2-8P01709 118 aa9.49□□□□□ -0.89
SMARCE1-216ENST00000580419 SMIM17P0DL12 118 aa9.49□□□□□ -0.89
SMARCE1-216ENST00000580419 SULT1A2P50226 295 aa9.49□□□□□ -0.89
SMARCE1-216ENST00000580419 CACNG7P62955 275 aa9.49□□□□□ -0.89
SMARCE1-216ENST00000580419 IQCJQ1A5X6 159 aa9.49□□□□□ -0.89
SMARCE1-216ENST00000580419 ENHOQ6UWT2 76 aa9.49□□□□□ -0.89
SMARCE1-216ENST00000580419 MEF2BQ02080 365 aaPredicted RBP9.48□□□□□ -0.89
SMARCE1-216ENST00000580419 DGAT2L7PQ6IED9 249 aa9.48□□□□□ -0.89
SMARCE1-216ENST00000580419 CHAC1Q9BUX1 264 aa9.48□□□□□ -0.89
SMARCE1-216ENST00000580419 GNG13Q9P2W3 67 aa9.48□□□□□ -0.89
SMARCE1-216ENST00000580419 TRBV25-1A0A075B6N4 114 aa9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 TMEM262E9PQX1 116 aa9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 M0QY20 66 aa9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 LECT2O14960 151 aa9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 IFNA1P01562 189 aa9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 CRPP02741 224 aa9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 MPV17L2Q567V2 206 aa9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 CENPWQ5EE01 88 aa9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 TCTE3Q8IZS6 198 aa9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 FER1L6-AS1Q8NA97 138 aa9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 DAZAP1Q96EP5 407 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 DERL1Q9BUN8 251 aa9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 CNFNQ9BYD5 112 aa9.47□□□□□ -0.89
SMARCE1-216ENST00000580419 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.46□□□□□ -0.9
SMARCE1-216ENST00000580419 A0A1B0GUV1 79 aa9.46□□□□□ -0.9
SMARCE1-216ENST00000580419 F5H697 171 aa9.46□□□□□ -0.9
SMARCE1-216ENST00000580419 GNG4P50150 75 aa9.46□□□□□ -0.9
SMARCE1-216ENST00000580419 NTM-AS1Q6ZSK4 140 aa9.46□□□□□ -0.9
SMARCE1-216ENST00000580419 C9orf62Q8N4C0 152 aa9.46□□□□□ -0.9
SMARCE1-216ENST00000580419 DEFB104AQ8WTQ1 72 aa9.46□□□□□ -0.9
SMARCE1-216ENST00000580419 PGLYRP4Q96LB8 373 aa9.46□□□□□ -0.9
SMARCE1-216ENST00000580419 A0A1B0GV50 99 aa9.45□□□□□ -0.9
SMARCE1-216ENST00000580419 TRGC1P0CF51 173 aa9.45□□□□□ -0.9
SMARCE1-216ENST00000580419 SLC51BQ86UW2 128 aa9.45□□□□□ -0.9
SMARCE1-216ENST00000580419 CHCHD5Q9BSY4 110 aa9.45□□□□□ -0.9
SMARCE1-216ENST00000580419 TRAV8-4A0A0B4J246 113 aa9.44□□□□□ -0.9
SMARCE1-216ENST00000580419 IGHV1-24A0A0C4DH33 117 aa9.44□□□□□ -0.9
SMARCE1-216ENST00000580419 KRTAP29-1A8MX34 341 aaPredicted RBP9.44□□□□□ -0.9
SMARCE1-216ENST00000580419 P01737 135 aa9.44□□□□□ -0.9
SMARCE1-216ENST00000580419 ANGP03950 147 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-216ENST00000580419 BCL2P10415 239 aa9.44□□□□□ -0.9
SMARCE1-216ENST00000580419 SCXQ7RTU7 201 aa9.44□□□□□ -0.9
SMARCE1-216ENST00000580419 LINC00528Q8N1L1 170 aa9.44□□□□□ -0.9
SMARCE1-216ENST00000580419 C15orf54Q8N8G6 183 aa9.44□□□□□ -0.9
SMARCE1-216ENST00000580419 CLRN3Q8NCR9 226 aa9.44□□□□□ -0.9
SMARCE1-216ENST00000580419 OR2D3Q8NGH3 330 aa9.44□□□□□ -0.9
SMARCE1-216ENST00000580419 TRBV20OR9-2A0A075B6H5 130 aa9.43□□□□□ -0.9
SMARCE1-216ENST00000580419 GZMBP10144 247 aa9.43□□□□□ -0.9
SMARCE1-216ENST00000580419 CTRLP40313 264 aa9.43□□□□□ -0.9
SMARCE1-216ENST00000580419 RBX1P62877 108 aa9.43□□□□□ -0.9
SMARCE1-216ENST00000580419 HAMPP81172 84 aa9.43□□□□□ -0.9
SMARCE1-216ENST00000580419 KRTAP26-1Q6PEX3 210 aa9.43□□□□□ -0.9
SMARCE1-216ENST00000580419 NDUFS6O75380 124 aaKnown RBP9.42□□□□□ -0.9
SMARCE1-216ENST00000580419 RASL11AQ6T310 242 aa9.42□□□□□ -0.9
SMARCE1-216ENST00000580419 C9orf163Q8N9P6 203 aa9.42□□□□□ -0.9
SMARCE1-216ENST00000580419 FAM210AQ96ND0 272 aa9.42□□□□□ -0.9
SMARCE1-216ENST00000580419 DPH3P1Q9H4G8 78 aa9.42□□□□□ -0.9
SMARCE1-216ENST00000580419 NIT2Q9NQR4 276 aa9.42□□□□□ -0.9
SMARCE1-216ENST00000580419 SUMO4Q6EEV6 95 aa9.41□□□□□ -0.9
SMARCE1-216ENST00000580419 CIRBP-AS1Q8TBR5 109 aa9.41□□□□□ -0.9
SMARCE1-216ENST00000580419 MED9Q9NWA0 146 aa9.41□□□□□ -0.9
SMARCE1-216ENST00000580419 MUC21A0A0G2JKD1 596 aa9.4□□□□□ -0.9
SMARCE1-216ENST00000580419 MUC21A0A140T8X8 626 aa9.4□□□□□ -0.9
SMARCE1-216ENST00000580419 RAB19A4D1S5 217 aa9.4□□□□□ -0.9
SMARCE1-216ENST00000580419 USP17L23D6RBM5 183 aa9.4□□□□□ -0.9
SMARCE1-216ENST00000580419 KRTAP10-4P60372 401 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-216ENST00000580419 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-216ENST00000580419 TMEM250H0YL14 139 aa9.39□□□□□ -0.91
SMARCE1-216ENST00000580419 NTF3P20783 257 aa9.39□□□□□ -0.91
SMARCE1-216ENST00000580419 CNBPP62633 177 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-216ENST00000580419 TEX261Q6UWH6 196 aa9.39□□□□□ -0.91
SMARCE1-216ENST00000580419 LYZL1Q6UWQ5 148 aa9.39□□□□□ -0.91
SMARCE1-216ENST00000580419 LINC00269Q8N2A0 174 aa9.39□□□□□ -0.91
SMARCE1-216ENST00000580419 NUDT10Q8NFP7 164 aa9.39□□□□□ -0.91
SMARCE1-216ENST00000580419 NUDT11Q96G61 164 aa9.39□□□□□ -0.91
SMARCE1-216ENST00000580419 TMEM243Q9BU79 118 aa9.39□□□□□ -0.91
SMARCE1-216ENST00000580419 PRSS1P07477 247 aa9.38□□□□□ -0.91
SMARCE1-216ENST00000580419 REG3AQ06141 175 aa9.38□□□□□ -0.91
SMARCE1-216ENST00000580419 LYPD6BQ8NI32 183 aa9.38□□□□□ -0.91
SMARCE1-216ENST00000580419 TPPP3Q9BW30 176 aa9.38□□□□□ -0.91
SMARCE1-216ENST00000580419 H7C423 109 aa9.37□□□□□ -0.91
SMARCE1-216ENST00000580419 NCR2O95944 276 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms