RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	COMMD3	Q9UBI1	195 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	METTL15P1	P0C7V9	234 aa		3.5	□□□□□ -1.85
KPNB1-209	ENST00000580158	S100A4	P26447	101 aa	Known RBP	3.5	□□□□□ -1.85
KPNB1-209	ENST00000580158	GAGE6	Q13070	117 aa		3.5	□□□□□ -1.85
KPNB1-209	ENST00000580158	FAM74A4	Q5TZK3	123 aa		3.5	□□□□□ -1.85
KPNB1-209	ENST00000580158	NRAC	Q8N912	160 aa		3.5	□□□□□ -1.85
KPNB1-209	ENST00000580158	C15orf40	Q8WUR7	153 aa		3.5	□□□□□ -1.85
KPNB1-209	ENST00000580158	MGST2	Q99735	147 aa		3.5	□□□□□ -1.85
KPNB1-209	ENST00000580158	TREM1	Q9NP99	234 aa		3.5	□□□□□ -1.85
KPNB1-209	ENST00000580158	RAB26	Q9ULW5	256 aa		3.5	□□□□□ -1.85
KPNB1-209	ENST00000580158	IGLV5-45	A0A087WSX0	123 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158		A0A087WZ39	114 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158		F6UZH7	168 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	MT1H	P80294	61 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	MIC13	Q5XKP0	118 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	UFSP1	Q6NVU6	142 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	LINC00173	Q6ZV60	143 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	C15orf56	Q8N910	161 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	TSKU	Q8WUA8	353 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	PRRT1	Q99946	306 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	GGACT	Q9BVM4	153 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	NMES1	Q9C002	83 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	NAA50	Q9GZZ1	169 aa	Known RBP	3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	JPT2	Q9H910	190 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	PHLDA3	Q9Y5J5	127 aa		3.49	□□□□□ -1.85
KPNB1-209	ENST00000580158	TRBV25-1	A0A075B6N4	114 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158		M0R2T5	61 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	RNASE3	P12724	160 aa	Known RBP	3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	TGFBR1	P36897	503 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	RAN	P62826	216 aa	Known RBP	3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	FAAP20	Q6NZ36	180 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	TMEM14EP	Q6UXP3	125 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	PHF5A	Q7RTV0	110 aa	Known RBP	3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	LINC00518	Q8N0U6	118 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	TYMSOS	Q8TAI1	123 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	DIRAS2	Q96HU8	199 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	SMIM8	Q96KF7	97 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	CARD19	Q96LW7	228 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	CNBD2	Q96M20	576 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	NDFIP1	Q9BT67	221 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	SLIRP	Q9GZT3	109 aa	Known RBP	3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	PPDPF	Q9H3Y8	114 aa		3.48	□□□□□ -1.85
KPNB1-209	ENST00000580158	GVQW2	A0A096LPI5	108 aa	Predicted RBP	3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158		A0A1W2PNN7	141 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	FAM25A	B3EWG3	89 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	FAM25C	B3EWG5	89 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	FAM25G	B3EWG6	89 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	SSSCA1	O60232	199 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	HPGDS	O60760	199 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	AKAIN1	P0CW23	69 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	RPL29	P47914	159 aa	Known RBP	3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	SULT1A2	P50226	295 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	MRPS10	P82664	201 aa	Known RBP	3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	FAM74A1	Q5RGS3	127 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	EIF5AL1	Q6IS14	154 aa	Known RBP	3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	CMTM2	Q8TAZ6	248 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	SLC25A2	Q9BXI2	301 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	KRTAP4-1	Q9BYQ7	146 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	RPP21	Q9H633	154 aa	Known RBP	3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	LYRM2	Q9NU23	88 aa	Predicted RBP	3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	OR5AC2	Q9NZP5	309 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	SCP2D1	Q9UJQ7	156 aa		3.47	□□□□□ -1.85
KPNB1-209	ENST00000580158	LOC107984640	A0A0U1RRK4	108 aa		3.46	□□□□□ -1.86
KPNB1-209	ENST00000580158	SERTM2	A0A1B0GWG4	89 aa		3.46	□□□□□ -1.86
KPNB1-209	ENST00000580158	FGF6	P10767	208 aa		3.46	□□□□□ -1.86
KPNB1-209	ENST00000580158	C9orf116	Q5BN46	136 aa	Predicted RBP	3.46	□□□□□ -1.86
KPNB1-209	ENST00000580158	CLVS1	Q8IUQ0	354 aa	Predicted RBP	3.46	□□□□□ -1.86
KPNB1-209	ENST00000580158	OR10G8	Q8NGN5	311 aa		3.46	□□□□□ -1.86
KPNB1-209	ENST00000580158	MITD1	Q8WV92	249 aa		3.46	□□□□□ -1.86
KPNB1-209	ENST00000580158	PHYHIPL	Q96FC7	376 aa		3.46	□□□□□ -1.86
KPNB1-209	ENST00000580158	HYLS1	Q96M11	299 aa		3.46	□□□□□ -1.86
KPNB1-209	ENST00000580158	BCL7B	Q9BQE9	202 aa		3.46	□□□□□ -1.86
KPNB1-209	ENST00000580158	DERL1	Q9BUN8	251 aa		3.46	□□□□□ -1.86
KPNB1-209	ENST00000580158	VCX3B	Q9H321	246 aa		3.46	□□□□□ -1.86
KPNB1-209	ENST00000580158		A0A1B0GUV1	79 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158	FAM25E	A8MYX2	175 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158	GCG	P01275	180 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158	FHIT	P49789	147 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158	ARL16	Q0P5N6	197 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158	ZFP69	Q49AA0	526 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158	TMEM128	Q5BJH2	165 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158	NTM-AS1	Q6ZSK4	140 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158		Q6ZVQ6	151 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158	C20orf203	Q8NBC4	194 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158	SMIM4	Q8WVI0	70 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158	FXYD5	Q96DB9	178 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158	AQP10	Q96PS8	301 aa		3.45	□□□□□ -1.86
KPNB1-209	ENST00000580158	IGHV1-24	A0A0C4DH33	117 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	TRBV6-1	A0A0K0K1D8	114 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	FAM240B	A0A1B0GVZ2	78 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	ANKRD20A5P	A0PJZ0	165 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	PCP4L1	A6NKN8	68 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	OR7C2	O60412	319 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	TSHB	P01222	138 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	TAS2R30	P59541	319 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	RAB4B	P61018	213 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	BAX	Q07812	192 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	SYCN	Q0VAF6	134 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	SPANXN2	Q5MJ10	180 aa		3.44	□□□□□ -1.86
KPNB1-209	ENST00000580158	GOLT1A	Q6ZVE7	132 aa		3.44	□□□□□ -1.86

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