RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 UBE2D2P62837 147 aa8.31□□□□□ -1.08
CDK5RAP3-213ENST00000579605 CST9LP1Q5W188 147 aa8.31□□□□□ -1.08
CDK5RAP3-213ENST00000579605 ENHOQ6UWT2 76 aa8.31□□□□□ -1.08
CDK5RAP3-213ENST00000579605 STOML3Q8TAV4 291 aa8.31□□□□□ -1.08
CDK5RAP3-213ENST00000579605 GTSF1Q8WW33 167 aa8.31□□□□□ -1.08
CDK5RAP3-213ENST00000579605 TCEAL7Q9BRU2 100 aa8.31□□□□□ -1.08
CDK5RAP3-213ENST00000579605 MAP1LC3BQ9GZQ8 125 aa8.31□□□□□ -1.08
CDK5RAP3-213ENST00000579605 LTAP01374 205 aa8.3□□□□□ -1.08
CDK5RAP3-213ENST00000579605 CRPP02741 224 aa8.3□□□□□ -1.08
CDK5RAP3-213ENST00000579605 RPL19P84098 196 aaKnown RBP8.3□□□□□ -1.08
CDK5RAP3-213ENST00000579605 REG3GQ6UW15 175 aa8.3□□□□□ -1.08
CDK5RAP3-213ENST00000579605 FHITP49789 147 aa8.29□□□□□ -1.08
CDK5RAP3-213ENST00000579605 RAB4BP61018 213 aa8.29□□□□□ -1.08
CDK5RAP3-213ENST00000579605 CIRBPQ14011 172 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-213ENST00000579605 C15orf54Q8N8G6 183 aa8.29□□□□□ -1.08
CDK5RAP3-213ENST00000579605 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.29□□□□□ -1.08
CDK5RAP3-213ENST00000579605 TRBV6-8A0A0A6YYG3 113 aa8.28□□□□□ -1.08
CDK5RAP3-213ENST00000579605 ZNF56Q15929 161 aa8.28□□□□□ -1.08
CDK5RAP3-213ENST00000579605 OR10G8Q8NGN5 311 aa8.28□□□□□ -1.08
CDK5RAP3-213ENST00000579605 ANGP03950 147 aaKnown RBP8.27□□□□□ -1.09
CDK5RAP3-213ENST00000579605 PKIAP61925 76 aa8.27□□□□□ -1.09
CDK5RAP3-213ENST00000579605 PRR3P79522 188 aaKnown RBP8.27□□□□□ -1.09
CDK5RAP3-213ENST00000579605 NEXN-AS1Q8NBZ9 246 aa8.27□□□□□ -1.09
CDK5RAP3-213ENST00000579605 RNF185Q96GF1 192 aa8.27□□□□□ -1.09
CDK5RAP3-213ENST00000579605 ZNF471Q9BX82 626 aaPredicted RBP8.27□□□□□ -1.09
CDK5RAP3-213ENST00000579605 BATF3Q9NR55 127 aa8.27□□□□□ -1.09
CDK5RAP3-213ENST00000579605 CYTL1Q9NRR1 136 aa8.27□□□□□ -1.09
CDK5RAP3-213ENST00000579605 IGHV3-64A0A075B6Q5 118 aa8.26□□□□□ -1.09
CDK5RAP3-213ENST00000579605 F5H697 171 aa8.26□□□□□ -1.09
CDK5RAP3-213ENST00000579605 ARPC5O15511 151 aa8.26□□□□□ -1.09
CDK5RAP3-213ENST00000579605 PAGE4O60829 102 aa8.26□□□□□ -1.09
CDK5RAP3-213ENST00000579605 S100A9P06702 114 aaKnown RBP8.26□□□□□ -1.09
CDK5RAP3-213ENST00000579605 CXCL1P09341 107 aa8.26□□□□□ -1.09
CDK5RAP3-213ENST00000579605 MPV17L2Q567V2 206 aa8.26□□□□□ -1.09
CDK5RAP3-213ENST00000579605 LCE2AQ5TA79 106 aaPredicted RBP8.26□□□□□ -1.09
CDK5RAP3-213ENST00000579605 OR10AG1Q8NH19 301 aa8.26□□□□□ -1.09
CDK5RAP3-213ENST00000579605 LYPD6BQ8NI32 183 aa8.26□□□□□ -1.09
CDK5RAP3-213ENST00000579605 SPACA4Q8TDM5 124 aa8.26□□□□□ -1.09
CDK5RAP3-213ENST00000579605 CHCHD5Q9BSY4 110 aa8.26□□□□□ -1.09
CDK5RAP3-213ENST00000579605 PFDN1O60925 122 aa8.25□□□□□ -1.09
CDK5RAP3-213ENST00000579605 SPANXN1Q5VSR9 72 aa8.25□□□□□ -1.09
CDK5RAP3-213ENST00000579605 PRR27Q6MZM9 219 aa8.25□□□□□ -1.09
CDK5RAP3-213ENST00000579605 SPINK6Q6UWN8 80 aa8.25□□□□□ -1.09
CDK5RAP3-213ENST00000579605 BAGE2Q86Y30 109 aa8.25□□□□□ -1.09
CDK5RAP3-213ENST00000579605 PLAC8Q9NZF1 115 aa8.25□□□□□ -1.09
CDK5RAP3-213ENST00000579605 MUC21A0A0G2JKD1 596 aa8.24□□□□□ -1.09
CDK5RAP3-213ENST00000579605 MUC21A0A140T8X8 626 aa8.24□□□□□ -1.09
CDK5RAP3-213ENST00000579605 G3V3Q6 166 aa8.24□□□□□ -1.09
CDK5RAP3-213ENST00000579605 SSTP61278 116 aa8.24□□□□□ -1.09
CDK5RAP3-213ENST00000579605 MIAQ16674 131 aa8.24□□□□□ -1.09
CDK5RAP3-213ENST00000579605 TMEM97Q5BJF2 176 aa8.24□□□□□ -1.09
CDK5RAP3-213ENST00000579605 SFT2D1Q8WV19 159 aa8.24□□□□□ -1.09
CDK5RAP3-213ENST00000579605 A0A1B0GV50 99 aa8.23□□□□□ -1.09
CDK5RAP3-213ENST00000579605 SCO2A0A1W2PP80 73 aa8.23□□□□□ -1.09
CDK5RAP3-213ENST00000579605 hDV102S1A0JD36 115 aa8.23□□□□□ -1.09
CDK5RAP3-213ENST00000579605 SNAI2O43623 268 aa8.23□□□□□ -1.09
CDK5RAP3-213ENST00000579605 SMIM17P0DL12 118 aa8.23□□□□□ -1.09
CDK5RAP3-213ENST00000579605 CLPSL2Q6UWE3 100 aa8.23□□□□□ -1.09
CDK5RAP3-213ENST00000579605 FAM213BQ8TBF2 198 aa8.23□□□□□ -1.09
CDK5RAP3-213ENST00000579605 SSBP4Q9BWG4 385 aaPredicted RBP8.23□□□□□ -1.09
CDK5RAP3-213ENST00000579605 OR5AL1P0C617 328 aa8.22□□□□□ -1.09
CDK5RAP3-213ENST00000579605 GAGE6Q13070 117 aa8.22□□□□□ -1.09
CDK5RAP3-213ENST00000579605 MBD3L1Q8WWY6 194 aa8.22□□□□□ -1.09
CDK5RAP3-213ENST00000579605 DERL1Q9BUN8 251 aa8.22□□□□□ -1.09
CDK5RAP3-213ENST00000579605 MLST8Q9BVC4 326 aa8.22□□□□□ -1.09
CDK5RAP3-213ENST00000579605 TRBV25-1A0A075B6N4 114 aa8.21□□□□□ -1.1
CDK5RAP3-213ENST00000579605 UMAD1C9J7I0 102 aa8.21□□□□□ -1.1
CDK5RAP3-213ENST00000579605 H7C1H1 209 aa8.21□□□□□ -1.1
CDK5RAP3-213ENST00000579605 CNBPP62633 177 aaKnown RBP8.21□□□□□ -1.1
CDK5RAP3-213ENST00000579605 RBX1P62877 108 aa8.21□□□□□ -1.1
CDK5RAP3-213ENST00000579605 MAJINQ3KP22 176 aa8.21□□□□□ -1.1
CDK5RAP3-213ENST00000579605 NTM-AS1Q6ZSK4 140 aa8.21□□□□□ -1.1
CDK5RAP3-213ENST00000579605 LINC00269Q8N2A0 174 aa8.21□□□□□ -1.1
CDK5RAP3-213ENST00000579605 CLRN3Q8NCR9 226 aa8.21□□□□□ -1.1
CDK5RAP3-213ENST00000579605 AP1S3Q96PC3 154 aa8.21□□□□□ -1.1
CDK5RAP3-213ENST00000579605 VAX2Q9UIW0 290 aa8.21□□□□□ -1.1
CDK5RAP3-213ENST00000579605 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.2□□□□□ -1.1
CDK5RAP3-213ENST00000579605 SMLR1H3BR10 107 aa8.2□□□□□ -1.1
CDK5RAP3-213ENST00000579605 SLPIP03973 132 aa8.2□□□□□ -1.1
CDK5RAP3-213ENST00000579605 TMUB2Q71RG4 321 aa8.2□□□□□ -1.1
CDK5RAP3-213ENST00000579605 KCNRGQ8N5I3 272 aa8.2□□□□□ -1.1
CDK5RAP3-213ENST00000579605 AP5S1Q9NUS5 200 aa8.2□□□□□ -1.1
CDK5RAP3-213ENST00000579605 PRR34Q9NV39 138 aa8.2□□□□□ -1.1
CDK5RAP3-213ENST00000579605 IGHV1-24A0A0C4DH33 117 aa8.19□□□□□ -1.1
CDK5RAP3-213ENST00000579605 IGKV2-24A0A0C4DH68 120 aa8.19□□□□□ -1.1
CDK5RAP3-213ENST00000579605 MGPP08493 103 aa8.19□□□□□ -1.1
CDK5RAP3-213ENST00000579605 H2AFB1P0C5Y9 115 aa8.18□□□□□ -1.1
CDK5RAP3-213ENST00000579605 COX6A2Q02221 97 aa8.18□□□□□ -1.1
CDK5RAP3-213ENST00000579605 SRSF9Q13242 221 aaKnown RBP eCLIP8.18□□□□□ -1.1
CDK5RAP3-213ENST00000579605 ZNF345Q14585 488 aa8.18□□□□□ -1.1
CDK5RAP3-213ENST00000579605 IQCJQ1A5X6 159 aa8.18□□□□□ -1.1
CDK5RAP3-213ENST00000579605 RGS21Q2M5E4 152 aa8.18□□□□□ -1.1
CDK5RAP3-213ENST00000579605 KRTAP26-1Q6PEX3 210 aa8.18□□□□□ -1.1
CDK5RAP3-213ENST00000579605 STPG4Q8N801 248 aa8.18□□□□□ -1.1
CDK5RAP3-213ENST00000579605 TPPP3Q9BW30 176 aa8.18□□□□□ -1.1
CDK5RAP3-213ENST00000579605 IGLV10-54A0A075B6I4 117 aa8.17□□□□□ -1.1
CDK5RAP3-213ENST00000579605 KANTRA0A1W2PQU2 76 aa8.17□□□□□ -1.1
CDK5RAP3-213ENST00000579605 RPL35P42766 123 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-213ENST00000579605 PRR4Q16378 134 aa8.17□□□□□ -1.1
CDK5RAP3-213ENST00000579605 FAM231BA6NCW3 169 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms