RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 Q8N976 141 aa6.07□□□□□ -1.44
CDK5RAP3-211ENST00000578996 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.07□□□□□ -1.44
CDK5RAP3-211ENST00000578996 LYPD6BQ8NI32 183 aa6.07□□□□□ -1.44
CDK5RAP3-211ENST00000578996 FAM210AQ96ND0 272 aa6.07□□□□□ -1.44
CDK5RAP3-211ENST00000578996 TRBV6-8A0A0A6YYG3 113 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 RAB19A4D1S5 217 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 PLA2G1BP04054 148 aaKnown RBP6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 H2AFB1P0C5Y9 115 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 SMIM17P0DL12 118 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 RAB4BP61018 213 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 C15orf54Q8N8G6 183 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 NEXN-AS1Q8NBZ9 246 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 MBD3L1Q8WWY6 194 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 CHCHD5Q9BSY4 110 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 CHCHD7Q9BUK0 85 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 TPPP3Q9BW30 176 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 C1orf43Q9BWL3 253 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 MYCBP2O75592 4640 aa6.06□□□□□ -1.44
CDK5RAP3-211ENST00000578996 J3QL48 77 aa6.05□□□□□ -1.44
CDK5RAP3-211ENST00000578996 HLA-DQA1P01909 254 aa6.05□□□□□ -1.44
CDK5RAP3-211ENST00000578996 ANGP03950 147 aaKnown RBP6.05□□□□□ -1.44
CDK5RAP3-211ENST00000578996 Q0VG73 95 aa6.05□□□□□ -1.44
CDK5RAP3-211ENST00000578996 MPV17L2Q567V2 206 aa6.05□□□□□ -1.44
CDK5RAP3-211ENST00000578996 UQCC3Q6UW78 93 aa6.05□□□□□ -1.44
CDK5RAP3-211ENST00000578996 COMMD7Q86VX2 200 aa6.05□□□□□ -1.44
CDK5RAP3-211ENST00000578996 GNG13Q9P2W3 67 aa6.05□□□□□ -1.44
CDK5RAP3-211ENST00000578996 TEX46H3BTG2 121 aa6.04□□□□□ -1.44
CDK5RAP3-211ENST00000578996 SNAI2O43623 268 aa6.04□□□□□ -1.44
CDK5RAP3-211ENST00000578996 MGPP08493 103 aa6.04□□□□□ -1.44
CDK5RAP3-211ENST00000578996 CXCL1P09341 107 aa6.04□□□□□ -1.44
CDK5RAP3-211ENST00000578996 RPL35P42766 123 aaKnown RBP6.04□□□□□ -1.44
CDK5RAP3-211ENST00000578996 CLPSL2Q6UWE3 100 aa6.04□□□□□ -1.44
CDK5RAP3-211ENST00000578996 Q6ZSA8 131 aa6.04□□□□□ -1.44
CDK5RAP3-211ENST00000578996 SCXQ7RTU7 201 aa6.04□□□□□ -1.44
CDK5RAP3-211ENST00000578996 OR10G8Q8NGN5 311 aa6.04□□□□□ -1.44
CDK5RAP3-211ENST00000578996 AP1S3Q96PC3 154 aa6.04□□□□□ -1.44
CDK5RAP3-211ENST00000578996 MLST8Q9BVC4 326 aa6.04□□□□□ -1.44
CDK5RAP3-211ENST00000578996 TRAV1-1A0A0B4J248 108 aa6.03□□□□□ -1.44
CDK5RAP3-211ENST00000578996 OR5AL1P0C617 328 aa6.03□□□□□ -1.44
CDK5RAP3-211ENST00000578996 GZMBP10144 247 aa6.03□□□□□ -1.44
CDK5RAP3-211ENST00000578996 GAGE6Q13070 117 aa6.03□□□□□ -1.44
CDK5RAP3-211ENST00000578996 ENHOQ6UWT2 76 aa6.03□□□□□ -1.44
CDK5RAP3-211ENST00000578996 DAZAP1Q96EP5 407 aaKnown RBP6.03□□□□□ -1.44
CDK5RAP3-211ENST00000578996 DERL1Q9BUN8 251 aa6.03□□□□□ -1.44
CDK5RAP3-211ENST00000578996 SMDT1Q9H4I9 107 aa6.03□□□□□ -1.44
CDK5RAP3-211ENST00000578996 MANBALQ9NQG1 85 aa6.03□□□□□ -1.44
CDK5RAP3-211ENST00000578996 SRRM2Q9UQ35 2752 aaKnown RBP6.03□□□□□ -1.44
CDK5RAP3-211ENST00000578996 TRBV25-1A0A075B6N4 114 aa6.02□□□□□ -1.45
CDK5RAP3-211ENST00000578996 NDUFS6O75380 124 aaKnown RBP6.02□□□□□ -1.45
CDK5RAP3-211ENST00000578996 PKIAP61925 76 aa6.02□□□□□ -1.45
CDK5RAP3-211ENST00000578996 CCL20P78556 96 aa6.02□□□□□ -1.45
CDK5RAP3-211ENST00000578996 C14orf177Q52M58 125 aa6.02□□□□□ -1.45
CDK5RAP3-211ENST00000578996 CENPWQ5EE01 88 aa6.02□□□□□ -1.45
CDK5RAP3-211ENST00000578996 ATRAIDQ6UW56 229 aa6.02□□□□□ -1.45
CDK5RAP3-211ENST00000578996 OR2D3Q8NGH3 330 aa6.02□□□□□ -1.45
CDK5RAP3-211ENST00000578996 SSBP4Q9BWG4 385 aaPredicted RBP6.02□□□□□ -1.45
CDK5RAP3-211ENST00000578996 USP17L23D6RBM5 183 aa6.01□□□□□ -1.45
CDK5RAP3-211ENST00000578996 TMEM97Q5BJF2 176 aa6.01□□□□□ -1.45
CDK5RAP3-211ENST00000578996 NTM-AS1Q6ZSK4 140 aa6.01□□□□□ -1.45
CDK5RAP3-211ENST00000578996 FER1L6-AS1Q8NA97 138 aa6.01□□□□□ -1.45
CDK5RAP3-211ENST00000578996 DEFB104AQ8WTQ1 72 aa6.01□□□□□ -1.45
CDK5RAP3-211ENST00000578996 CHAC1Q9BUX1 264 aa6.01□□□□□ -1.45
CDK5RAP3-211ENST00000578996 DMBT1Q9UGM3 2413 aaPredicted RBP6.01□□□□□ -1.45
CDK5RAP3-211ENST00000578996 GNG4P50150 75 aa6□□□□□ -1.45
CDK5RAP3-211ENST00000578996 RBX1P62877 108 aa6□□□□□ -1.45
CDK5RAP3-211ENST00000578996 MIAQ16674 131 aa6□□□□□ -1.45
CDK5RAP3-211ENST00000578996 LINC00269Q8N2A0 174 aa6□□□□□ -1.45
CDK5RAP3-211ENST00000578996 CIRBP-AS1Q8TBR5 109 aa6□□□□□ -1.45
CDK5RAP3-211ENST00000578996 KIF25-AS1Q9Y6Z4 181 aa6□□□□□ -1.45
CDK5RAP3-211ENST00000578996 IGLV10-54A0A075B6I4 117 aa5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 IGHV1-24A0A0C4DH33 117 aa5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 XKRY2A2RUG3 117 aa5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 H7C1H1 209 aa5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 IFNA1P01562 189 aa5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 IGLV2-8P01709 118 aa5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 P01737 135 aa5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 TAGLN2P37802 199 aaKnown RBP5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 RPS20P60866 119 aaKnown RBP5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 CACNG7P62955 275 aa5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 C10orf91Q5T1B1 145 aa5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 SUMO4Q6EEV6 95 aa5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 C11orf52Q96A22 123 aa5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 VAX2Q9UIW0 290 aa5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 FLG2Q5D862 2391 aaPredicted RBP5.99□□□□□ -1.45
CDK5RAP3-211ENST00000578996 TMEM218A2RU14 115 aa5.98□□□□□ -1.45
CDK5RAP3-211ENST00000578996 M0QY20 66 aa5.98□□□□□ -1.45
CDK5RAP3-211ENST00000578996 PDE6DO43924 150 aa5.98□□□□□ -1.45
CDK5RAP3-211ENST00000578996 PRSS1P07477 247 aa5.98□□□□□ -1.45
CDK5RAP3-211ENST00000578996 IGLC6P0CF74 106 aa5.98□□□□□ -1.45
CDK5RAP3-211ENST00000578996 MEF2BQ02080 365 aaPredicted RBP5.98□□□□□ -1.45
CDK5RAP3-211ENST00000578996 REG3AQ06141 175 aa5.98□□□□□ -1.45
CDK5RAP3-211ENST00000578996 C19orf71A6NCJ1 209 aa5.97□□□□□ -1.45
CDK5RAP3-211ENST00000578996 UBE2L6O14933 153 aa5.97□□□□□ -1.45
CDK5RAP3-211ENST00000578996 TRGC1P0CF51 173 aa5.97□□□□□ -1.45
CDK5RAP3-211ENST00000578996 PEA15Q15121 130 aa5.97□□□□□ -1.45
CDK5RAP3-211ENST00000578996 IQCJQ1A5X6 159 aa5.97□□□□□ -1.45
CDK5RAP3-211ENST00000578996 RASL11AQ6T310 242 aa5.97□□□□□ -1.45
CDK5RAP3-211ENST00000578996 LYZL1Q6UWQ5 148 aa5.97□□□□□ -1.45
CDK5RAP3-211ENST00000578996 SMIM12Q96EX1 92 aa5.97□□□□□ -1.45
CDK5RAP3-211ENST00000578996 TMEM243Q9BU79 118 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms