RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 M0QY20 66 aa8.46□□□□□ -1.06
IFT20-207ENST00000578547 SRIP30626 198 aa8.46□□□□□ -1.06
IFT20-207ENST00000578547 MRPL51Q4U2R6 128 aaKnown RBP8.46□□□□□ -1.06
IFT20-207ENST00000578547 C15orf53Q8NAA6 179 aa8.46□□□□□ -1.06
IFT20-207ENST00000578547 MRAP2Q96G30 205 aa8.46□□□□□ -1.06
IFT20-207ENST00000578547 YPEL4Q96NS1 127 aa8.46□□□□□ -1.06
IFT20-207ENST00000578547 TRBV24-1A0A075B6N3 115 aa8.45□□□□□ -1.06
IFT20-207ENST00000578547 TRBV10-1A0A0K0K1A3 114 aa8.45□□□□□ -1.06
IFT20-207ENST00000578547 H3BNG1 76 aa8.45□□□□□ -1.06
IFT20-207ENST00000578547 GAS8-AS1O95177 125 aa8.45□□□□□ -1.06
IFT20-207ENST00000578547 RPL36AP83881 106 aaKnown RBP8.45□□□□□ -1.06
IFT20-207ENST00000578547 MRPL23Q16540 153 aaKnown RBP8.45□□□□□ -1.06
IFT20-207ENST00000578547 NEXN-AS1Q8NBZ9 246 aa8.45□□□□□ -1.06
IFT20-207ENST00000578547 ZNRF2Q8NHG8 242 aa8.45□□□□□ -1.06
IFT20-207ENST00000578547 RPL36ALQ969Q0 106 aaKnown RBP8.45□□□□□ -1.06
IFT20-207ENST00000578547 RPL39LQ96EH5 51 aaKnown RBP8.45□□□□□ -1.06
IFT20-207ENST00000578547 D6R8Y8 96 aa8.44□□□□□ -1.06
IFT20-207ENST00000578547 HLA-DQA1P01909 254 aa8.44□□□□□ -1.06
IFT20-207ENST00000578547 APCSP02743 223 aa8.44□□□□□ -1.06
IFT20-207ENST00000578547 CKS2P33552 79 aa8.44□□□□□ -1.06
IFT20-207ENST00000578547 COX19Q49B96 90 aa8.44□□□□□ -1.06
IFT20-207ENST00000578547 OR10J3Q5JRS4 329 aa8.44□□□□□ -1.06
IFT20-207ENST00000578547 FRZBQ92765 325 aa8.44□□□□□ -1.06
IFT20-207ENST00000578547 APLNQ9ULZ1 77 aa8.44□□□□□ -1.06
IFT20-207ENST00000578547 TNFRSF18Q9Y5U5 241 aa8.44□□□□□ -1.06
IFT20-207ENST00000578547 PLECQ15149 4684 aaKnown RBP8.44□□□□□ -1.06
IFT20-207ENST00000578547 RPS10P46783 165 aaKnown RBP8.43□□□□□ -1.06
IFT20-207ENST00000578547 GNB1LQ9BYB4 327 aa8.43□□□□□ -1.06
IFT20-207ENST00000578547 MRPL18Q9H0U6 180 aaKnown RBP8.43□□□□□ -1.06
IFT20-207ENST00000578547 NIT2Q9NQR4 276 aa8.43□□□□□ -1.06
IFT20-207ENST00000578547 TRBV7-3A0A075B6L6 115 aa8.42□□□□□ -1.06
IFT20-207ENST00000578547 IGHV3-38A0A0C4DH36 116 aa8.42□□□□□ -1.06
IFT20-207ENST00000578547 MT-ND6P03923 174 aa8.42□□□□□ -1.06
IFT20-207ENST00000578547 KIAA1644Q3SXP7 199 aa8.42□□□□□ -1.06
IFT20-207ENST00000578547 NEGR1Q7Z3B1 354 aa8.42□□□□□ -1.06
IFT20-207ENST00000578547 ORMDL3Q8N138 153 aa8.42□□□□□ -1.06
IFT20-207ENST00000578547 ATP6V0E2Q8NHE4 81 aa8.42□□□□□ -1.06
IFT20-207ENST00000578547 DNAJC30Q96LL9 226 aa8.42□□□□□ -1.06
IFT20-207ENST00000578547 TRAPPC1Q9Y5R8 145 aa8.42□□□□□ -1.06
IFT20-207ENST00000578547 LINC00694P0DN24 101 aa8.41□□□□□ -1.06
IFT20-207ENST00000578547 TCTAP57738 103 aa8.41□□□□□ -1.06
IFT20-207ENST00000578547 UBE2D3P61077 147 aa8.41□□□□□ -1.06
IFT20-207ENST00000578547 UBE2D2P62837 147 aa8.41□□□□□ -1.06
IFT20-207ENST00000578547 FABP9Q0Z7S8 132 aa8.41□□□□□ -1.06
IFT20-207ENST00000578547 NRACQ8N912 160 aa8.41□□□□□ -1.06
IFT20-207ENST00000578547 PRELID3AQ96N28 172 aa8.41□□□□□ -1.06
IFT20-207ENST00000578547 ST20Q9HBF5 79 aa8.41□□□□□ -1.06
IFT20-207ENST00000578547 NPYP01303 97 aa8.4□□□□□ -1.06
IFT20-207ENST00000578547 PPBPP02775 128 aa8.4□□□□□ -1.06
IFT20-207ENST00000578547 SH2D6Q7Z4S9 175 aa8.4□□□□□ -1.06
IFT20-207ENST00000578547 UBE2DNLQ8IWF7 75 aa8.4□□□□□ -1.06
IFT20-207ENST00000578547 DEFB104AQ8WTQ1 72 aa8.4□□□□□ -1.06
IFT20-207ENST00000578547 SDHAF1A6NFY7 115 aa8.39□□□□□ -1.07
IFT20-207ENST00000578547 COLCA2A8K830 154 aa8.39□□□□□ -1.07
IFT20-207ENST00000578547 TNFRSF6BO95407 300 aa8.39□□□□□ -1.07
IFT20-207ENST00000578547 PPP1R17O96001 155 aa8.39□□□□□ -1.07
IFT20-207ENST00000578547 RAB5AP20339 215 aa8.39□□□□□ -1.07
IFT20-207ENST00000578547 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.39□□□□□ -1.07
IFT20-207ENST00000578547 TRBV6-5A0A0K0K1A5 114 aa8.38□□□□□ -1.07
IFT20-207ENST00000578547 CCL18P55774 89 aa8.38□□□□□ -1.07
IFT20-207ENST00000578547 SUMO2P61956 95 aaKnown RBP8.38□□□□□ -1.07
IFT20-207ENST00000578547 ESRGQ1W209 222 aa8.38□□□□□ -1.07
IFT20-207ENST00000578547 LYPD5Q6UWN5 251 aa8.38□□□□□ -1.07
IFT20-207ENST00000578547 DAZ4Q86SG3 579 aaKnown RBP8.38□□□□□ -1.07
IFT20-207ENST00000578547 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
IFT20-207ENST00000578547 DAZ3Q9NR90 486 aaKnown RBP8.38□□□□□ -1.07
IFT20-207ENST00000578547 PMCHP20382 165 aa8.37□□□□□ -1.07
IFT20-207ENST00000578547 TMEM70Q9BUB7 260 aa8.37□□□□□ -1.07
IFT20-207ENST00000578547 MAP1LC3AQ9H492 121 aa8.37□□□□□ -1.07
IFT20-207ENST00000578547 LINC00588Q9Y4M8 146 aa8.37□□□□□ -1.07
IFT20-207ENST00000578547 LOC389332A0A1B0GUA5 103 aa8.36□□□□□ -1.07
IFT20-207ENST00000578547 PHOX2AO14813 284 aa8.36□□□□□ -1.07
IFT20-207ENST00000578547 COTL1Q14019 142 aa8.36□□□□□ -1.07
IFT20-207ENST00000578547 C20orf78Q9BR46 151 aa8.36□□□□□ -1.07
IFT20-207ENST00000578547 ALKBH7Q9BT30 221 aaPredicted RBP8.36□□□□□ -1.07
IFT20-207ENST00000578547 LAMTOR2Q9Y2Q5 125 aa8.36□□□□□ -1.07
IFT20-207ENST00000578547 I3L3M4 83 aa8.35□□□□□ -1.07
IFT20-207ENST00000578547 VCYO14598 125 aa8.35□□□□□ -1.07
IFT20-207ENST00000578547 LY6G6CO95867 125 aa8.35□□□□□ -1.07
IFT20-207ENST00000578547 TRGC2P03986 189 aa8.35□□□□□ -1.07
IFT20-207ENST00000578547 SMIM2Q9BVW6 85 aa8.35□□□□□ -1.07
IFT20-207ENST00000578547 MRPS16Q9Y3D3 137 aaKnown RBP8.35□□□□□ -1.07
IFT20-207ENST00000578547 TRBV6-8A0A0A6YYG3 113 aa8.34□□□□□ -1.07
IFT20-207ENST00000578547 TRBV27A0A0K0K1C4 114 aa8.34□□□□□ -1.07
IFT20-207ENST00000578547 TSHBP01222 138 aa8.34□□□□□ -1.07
IFT20-207ENST00000578547 FCER1GP30273 86 aa8.34□□□□□ -1.07
IFT20-207ENST00000578547 AMTP48728 403 aa8.34□□□□□ -1.07
IFT20-207ENST00000578547 POLR2KP53803 58 aaKnown RBP8.34□□□□□ -1.07
IFT20-207ENST00000578547 TIRAPP58753 221 aa8.34□□□□□ -1.07
IFT20-207ENST00000578547 LELP1Q5T871 98 aa8.34□□□□□ -1.07
IFT20-207ENST00000578547 NTM-AS1Q6ZSK4 140 aa8.34□□□□□ -1.07
IFT20-207ENST00000578547 TRBV25-1A0A075B6N4 114 aa8.33□□□□□ -1.08
IFT20-207ENST00000578547 TRAV8-6A0A0B4J262 113 aa8.33□□□□□ -1.08
IFT20-207ENST00000578547 IGHV1-24A0A0C4DH33 117 aa8.33□□□□□ -1.08
IFT20-207ENST00000578547 IQCJQ1A5X6 159 aa8.33□□□□□ -1.08
IFT20-207ENST00000578547 TMEM97Q5BJF2 176 aa8.33□□□□□ -1.08
IFT20-207ENST00000578547 LGALS9CQ6DKI2 356 aa8.33□□□□□ -1.08
IFT20-207ENST00000578547 WFDC10BQ8IUB3 73 aa8.33□□□□□ -1.08
IFT20-207ENST00000578547 LINC00476Q8WZB0 136 aa8.33□□□□□ -1.08
IFT20-207ENST00000578547 KIR2DL4Q99706 377 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms