RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 PAX4O43316 350 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HIST1H2BKO60814 126 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 NPYP01303 97 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HIST1H2BJP06899 126 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HOXA5P20719 270 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HIST1H2BOP23527 126 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HIST1H2BBP33778 126 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HIST1H2BDP58876 126 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 NANOS2P60321 138 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 SUMO2P61956 95 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HIST1H2BCP62807 126 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HIST2H2BEQ16778 126 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 Q6ZTC4 211 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 C18orf32Q8TCD1 76 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HIST1H2BHQ93079 126 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HIST1H2BNQ99877 126 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HIST1H2BMQ99879 126 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 NXT2Q9NPJ8 142 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 TENM3Q9P273 2699 aa11.93□□□□□ -0.5
CDK5RAP3-207ENST00000578134 TRBV7-3A0A075B6L6 115 aa11.92□□□□□ -0.5
CDK5RAP3-207ENST00000578134 VCYO14598 125 aa11.92□□□□□ -0.5
CDK5RAP3-207ENST00000578134 TCAPO15273 167 aa11.92□□□□□ -0.5
CDK5RAP3-207ENST00000578134 GAS8-AS1O95177 125 aa11.92□□□□□ -0.5
CDK5RAP3-207ENST00000578134 NEXN-AS1Q8NBZ9 246 aa11.92□□□□□ -0.5
CDK5RAP3-207ENST00000578134 RPL39LQ96EH5 51 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-207ENST00000578134 DNAH9Q9NYC9 4486 aa11.92□□□□□ -0.5
CDK5RAP3-207ENST00000578134 DEFB131BA0A096LNP1 70 aa11.91□□□□□ -0.5
CDK5RAP3-207ENST00000578134 K7EMI3 77 aa11.91□□□□□ -0.5
CDK5RAP3-207ENST00000578134 PMCHP20382 165 aa11.91□□□□□ -0.5
CDK5RAP3-207ENST00000578134 POLR2KP53803 58 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-207ENST00000578134 SH2D6Q7Z4S9 175 aa11.91□□□□□ -0.5
CDK5RAP3-207ENST00000578134 PRSS3P2Q8NHM4 247 aa11.91□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HUWE1Q7Z6Z7 4374 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-207ENST00000578134 TRBV27A0A0K0K1C4 114 aa11.9□□□□□ -0.5
CDK5RAP3-207ENST00000578134 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
CDK5RAP3-207ENST00000578134 HTN3P15516 51 aa11.9□□□□□ -0.5
CDK5RAP3-207ENST00000578134 DAZ4Q86SG3 579 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-207ENST00000578134 BAGE3Q86Y29 109 aa11.9□□□□□ -0.5
CDK5RAP3-207ENST00000578134 Q8N8P6 123 aa11.9□□□□□ -0.5
CDK5RAP3-207ENST00000578134 TMEM70Q9BUB7 260 aa11.9□□□□□ -0.5
CDK5RAP3-207ENST00000578134 DAZ3Q9NR90 486 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-207ENST00000578134 ZNRF2Q8NHG8 242 aa11.89□□□□□ -0.51
CDK5RAP3-207ENST00000578134 SMIM2Q9BVW6 85 aa11.89□□□□□ -0.51
CDK5RAP3-207ENST00000578134 TRAV26-1A0A087WT03 109 aa11.88□□□□□ -0.51
CDK5RAP3-207ENST00000578134 I3L3M4 83 aa11.88□□□□□ -0.51
CDK5RAP3-207ENST00000578134 LINC00614P0C842 121 aa11.88□□□□□ -0.51
CDK5RAP3-207ENST00000578134 P0DMU3 169 aa11.88□□□□□ -0.51
CDK5RAP3-207ENST00000578134 FAM231AP0DMU4 169 aa11.88□□□□□ -0.51
CDK5RAP3-207ENST00000578134 FAM231CP0DMU5 169 aa11.88□□□□□ -0.51
CDK5RAP3-207ENST00000578134 MRPL23Q16540 153 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-207ENST00000578134 COA6Q5JTJ3 125 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-207ENST00000578134 CHCHD1Q96BP2 118 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-207ENST00000578134 VSIG2Q96IQ7 327 aa11.88□□□□□ -0.51
CDK5RAP3-207ENST00000578134 KIR2DL4Q99706 377 aa11.88□□□□□ -0.51
CDK5RAP3-207ENST00000578134 LOC389332A0A1B0GUA5 103 aa11.87□□□□□ -0.51
CDK5RAP3-207ENST00000578134 S100A6P06703 90 aa11.87□□□□□ -0.51
CDK5RAP3-207ENST00000578134 GYPEP15421 78 aa11.87□□□□□ -0.51
CDK5RAP3-207ENST00000578134 G0S2P27469 103 aa11.87□□□□□ -0.51
CDK5RAP3-207ENST00000578134 UBE2D3P61077 147 aa11.87□□□□□ -0.51
CDK5RAP3-207ENST00000578134 UBE2D2P62837 147 aa11.87□□□□□ -0.51
CDK5RAP3-207ENST00000578134 TMEM97Q5BJF2 176 aa11.87□□□□□ -0.51
CDK5RAP3-207ENST00000578134 FA2HQ7L5A8 372 aa11.87□□□□□ -0.51
CDK5RAP3-207ENST00000578134 NIT1Q86X76 327 aa11.87□□□□□ -0.51
CDK5RAP3-207ENST00000578134 IGLV2-18A0A075B6J9 118 aa11.86□□□□□ -0.51
CDK5RAP3-207ENST00000578134 GAGE12JA6NER3 117 aa11.86□□□□□ -0.51
CDK5RAP3-207ENST00000578134 LINC01546A6NGU7 62 aa11.86□□□□□ -0.51
CDK5RAP3-207ENST00000578134 IFI27P40305 119 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-207ENST00000578134 GAGE1Q13065 139 aa11.86□□□□□ -0.51
CDK5RAP3-207ENST00000578134 GAGE4Q13068 117 aa11.86□□□□□ -0.51
CDK5RAP3-207ENST00000578134 GAGE5Q13069 117 aa11.86□□□□□ -0.51
CDK5RAP3-207ENST00000578134 GAGE13Q4V321 117 aa11.86□□□□□ -0.51
CDK5RAP3-207ENST00000578134 ICOSQ9Y6W8 199 aa11.86□□□□□ -0.51
CDK5RAP3-207ENST00000578134 LINC00694P0DN24 101 aa11.85□□□□□ -0.51
CDK5RAP3-207ENST00000578134 NDUFA6P56556 154 aa11.85□□□□□ -0.51
CDK5RAP3-207ENST00000578134 IQCJQ1A5X6 159 aa11.85□□□□□ -0.51
CDK5RAP3-207ENST00000578134 PHLDA1Q8WV24 401 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-207ENST00000578134 Q9UF83 564 aa11.85□□□□□ -0.51
CDK5RAP3-207ENST00000578134 COL7A1Q02388 2944 aa11.85□□□□□ -0.51
CDK5RAP3-207ENST00000578134 PRKDCP78527 4128 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-207ENST00000578134 A0A0J9YY99 117 aa11.84□□□□□ -0.51
CDK5RAP3-207ENST00000578134 ORMDL2Q53FV1 153 aa11.84□□□□□ -0.51
CDK5RAP3-207ENST00000578134 C15orf53Q8NAA6 179 aa11.84□□□□□ -0.51
CDK5RAP3-207ENST00000578134 ATP6V0E2Q8NHE4 81 aa11.84□□□□□ -0.51
CDK5RAP3-207ENST00000578134 GTSF1LQ9H1H1 148 aa11.84□□□□□ -0.51
CDK5RAP3-207ENST00000578134 AP5S1Q9NUS5 200 aa11.84□□□□□ -0.51
CDK5RAP3-207ENST00000578134 LOC100131303A0A0U1RQF7 123 aa11.83□□□□□ -0.52
CDK5RAP3-207ENST00000578134 LINC01549A6NIU2 74 aa11.83□□□□□ -0.52
CDK5RAP3-207ENST00000578134 ESDP10768 282 aa11.83□□□□□ -0.52
CDK5RAP3-207ENST00000578134 COTL1Q14019 142 aa11.83□□□□□ -0.52
CDK5RAP3-207ENST00000578134 LAGE3Q14657 143 aa11.83□□□□□ -0.52
CDK5RAP3-207ENST00000578134 FCER1GP30273 86 aa11.82□□□□□ -0.52
CDK5RAP3-207ENST00000578134 NEGR1Q7Z3B1 354 aa11.82□□□□□ -0.52
CDK5RAP3-207ENST00000578134 FBN3Q75N90 2809 aa11.82□□□□□ -0.52
CDK5RAP3-207ENST00000578134 HSBP1O75506 76 aa11.81□□□□□ -0.52
CDK5RAP3-207ENST00000578134 SERF1AO75920 110 aa11.81□□□□□ -0.52
CDK5RAP3-207ENST00000578134 RNASEKQ6P5S7 137 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-207ENST00000578134 STAB2Q8WWQ8 2551 aa11.81□□□□□ -0.52
CDK5RAP3-207ENST00000578134 A0A096LPF7 62 aa11.8□□□□□ -0.52
CDK5RAP3-207ENST00000578134 NUPR2A6NF83 97 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms