RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 TRAV13-1A0A0B4J241 112 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 TRAV12-3A0A0B4J271 114 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 H3BMG7 143 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 CETN3O15182 167 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 HBDP02042 147 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 CYBAP13498 195 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 SDC2P34741 201 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 SPA17Q15506 151 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 HSD17B12Q53GQ0 312 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 LINC00305Q7Z4B0 112 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 DYNLRB2Q8TF09 96 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 SMIM4Q8WVI0 70 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 CARD19Q96LW7 228 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 CCDC42Q96M95 316 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 LYRM2Q9NU23 88 aaPredicted RBP-0.86□□□□□ -2.55
CDH8-204ENST00000577536 IBTKQ9P2D0 1353 aaPredicted RBP-0.86□□□□□ -2.55
CDH8-204ENST00000577536 WDR97A6NE52 1622 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 ANKRD31Q8N7Z5 1873 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 TCOF1Q13428 1488 aaKnown RBP-0.86□□□□□ -2.55
CDH8-204ENST00000577536 IFT172Q9UG01 1749 aa-0.86□□□□□ -2.55
CDH8-204ENST00000577536 CCDC171Q6TFL3 1326 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 A0A0C4DFX4 3053 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 NBEAQ8NFP9 2946 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 FAM135BQ49AJ0 1406 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 FAM92AA1XBS5 289 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 H0YGG7 62 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 UQCRQO14949 82 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 IFNGP01579 166 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 COX8AP10176 69 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 CRYGSP22914 178 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 CEBPGP53567 150 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 PCBD1P61457 104 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 TMEM91Q6ZNR0 172 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 C9orf16Q9BUW7 83 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 LAMTOR2Q9Y2Q5 125 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 UFC1Q9Y3C8 167 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 DOCK1Q14185 1865 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 GAPVD1Q14C86 1478 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 ARFGEF1Q9Y6D6 1849 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 ADGRB1O14514 1584 aa-0.87□□□□□ -2.55
CDH8-204ENST00000577536 ADGBQ8N7X0 1667 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 RIF1Q5UIP0 2472 aaKnown RBP-0.88□□□□□ -2.55
CDH8-204ENST00000577536 VPS13BQ7Z7G8 4022 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 LRRC37A2A6NM11 1700 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 TRBV7-6A0A0J9YX20 115 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 TRDV1A0A1B0GX56 115 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 PPP5D1E7EU14 171 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 GABARAPH6UMI1 98 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 CST2P09228 141 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 PIRTP0C851 137 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 CRYBA4P53673 196 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 LSM6P62312 80 aaKnown RBP-0.88□□□□□ -2.55
CDH8-204ENST00000577536 LTC4SQ16873 150 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 ATP6V0E2Q8NHE4 81 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 ARMC1Q9NVT9 282 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 METTL1Q9UBP6 276 aaKnown RBP-0.88□□□□□ -2.55
CDH8-204ENST00000577536 DNHD1Q96M86 4753 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 DNAH1Q9P2D7 4330 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 LYSTQ99698 3801 aa-0.88□□□□□ -2.55
CDH8-204ENST00000577536 NUP210Q8TEM1 1887 aaPredicted RBP-0.88□□□□□ -2.55
CDH8-204ENST00000577536 TECPR2O15040 1411 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 ZFYVE9O95405 1425 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 PKD1L2Q7Z442 2459 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 DNAH11Q96DT5 4516 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 CELSR3Q9NYQ7 3312 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 CLPSL1A2RUU4 121 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 H3BNG1 76 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 SYS1-DBNDD2H3BUS1 97 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 ATG12O94817 140 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 CSN2P05814 226 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 RPS17P08708 135 aaKnown RBP-0.89□□□□□ -2.55
CDH8-204ENST00000577536 PIPP12273 146 aaPredicted RBP-0.89□□□□□ -2.55
CDH8-204ENST00000577536 HIST1H1BP16401 226 aaKnown RBP-0.89□□□□□ -2.55
CDH8-204ENST00000577536 RPL22P35268 128 aaKnown RBP-0.89□□□□□ -2.55
CDH8-204ENST00000577536 CCL7P80098 99 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 BASP1P80723 227 aaKnown RBP-0.89□□□□□ -2.55
CDH8-204ENST00000577536 TMED2Q15363 201 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 H1FX-AS1Q4G0G2 97 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 Q6JHZ5 121 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 STX19Q8N4C7 294 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 PRAP1Q96NZ9 151 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 PHB2Q99623 299 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 APLNQ9ULZ1 77 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 UHRF1BP1LA0JNW5 1464 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 PTPRMP28827 1452 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 MYH2Q9UKX2 1941 aa-0.89□□□□□ -2.55
CDH8-204ENST00000577536 TROQ12816 1431 aaPredicted RBP-0.89□□□□□ -2.55
CDH8-204ENST00000577536 KDM5AP29375 1690 aaKnown RBP-0.9□□□□□ -2.55
CDH8-204ENST00000577536 MRC1P22897 1456 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 MED23Q9ULK4 1368 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 CPSF4LA6NMK7 179 aaKnown RBP-0.9□□□□□ -2.55
CDH8-204ENST00000577536 M0R135 149 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 YPEL1O60688 119 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 SLC25A5P05141 298 aaKnown RBP-0.9□□□□□ -2.55
CDH8-204ENST00000577536 S100A11P31949 105 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 UBE2D1P51668 147 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 CCL18P55774 89 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 COTL1Q14019 142 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 TMEM170BQ5T4T1 132 aa-0.9□□□□□ -2.55
CDH8-204ENST00000577536 ATP11AUNQ6ZP68 121 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms