RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 MSRB1Q9NZV6 116 aa5.54□□□□□ -1.52
CCDC40-215ENST00000576033 TRGV11A0A075B6L2 103 aa5.53□□□□□ -1.52
CCDC40-215ENST00000576033 LY6G6CO95867 125 aa5.53□□□□□ -1.52
CCDC40-215ENST00000576033 PPBPP02775 128 aa5.53□□□□□ -1.52
CCDC40-215ENST00000576033 RAB4AP20338 218 aa5.53□□□□□ -1.52
CCDC40-215ENST00000576033 ASIPP42127 132 aa5.53□□□□□ -1.52
CCDC40-215ENST00000576033 TWIST1Q15672 202 aa5.53□□□□□ -1.52
CCDC40-215ENST00000576033 MRPL51Q4U2R6 128 aaKnown RBP5.53□□□□□ -1.52
CCDC40-215ENST00000576033 CHCHD1Q96BP2 118 aaKnown RBP5.53□□□□□ -1.52
CCDC40-215ENST00000576033 JPT2Q9H910 190 aa5.53□□□□□ -1.52
CCDC40-215ENST00000576033 LAMTOR2Q9Y2Q5 125 aa5.53□□□□□ -1.52
CCDC40-215ENST00000576033 KLK5Q9Y337 293 aaPredicted RBP5.53□□□□□ -1.52
CCDC40-215ENST00000576033 TRGV2A0A075B6R0 118 aa5.52□□□□□ -1.53
CCDC40-215ENST00000576033 TRAV26-1A0A087WT03 109 aa5.52□□□□□ -1.53
CCDC40-215ENST00000576033 IGHV3-73A0A0B4J1V6 119 aa5.52□□□□□ -1.53
CCDC40-215ENST00000576033 LOC100131303A0A0U1RQF7 123 aa5.52□□□□□ -1.53
CCDC40-215ENST00000576033 TEX48A0A1B0GUV7 120 aa5.52□□□□□ -1.53
CCDC40-215ENST00000576033 LINC01546A6NGU7 62 aa5.52□□□□□ -1.53
CCDC40-215ENST00000576033 PRSS47A8MTI9 375 aa5.52□□□□□ -1.53
CCDC40-215ENST00000576033 ATP5G1P05496 136 aa5.52□□□□□ -1.53
CCDC40-215ENST00000576033 SSTP61278 116 aa5.52□□□□□ -1.53
CCDC40-215ENST00000576033 NIT1Q86X76 327 aa5.52□□□□□ -1.53
CCDC40-215ENST00000576033 ORMDL3Q8N138 153 aa5.52□□□□□ -1.53
CCDC40-215ENST00000576033 DNAH17Q9UFH2 4485 aa5.52□□□□□ -1.53
CCDC40-215ENST00000576033 HECTD4Q9Y4D8 3996 aa5.51□□□□□ -1.53
CCDC40-215ENST00000576033 A0A096LPF7 62 aa5.51□□□□□ -1.53
CCDC40-215ENST00000576033 D6R8Y8 96 aa5.51□□□□□ -1.53
CCDC40-215ENST00000576033 NUDT3O95989 172 aa5.51□□□□□ -1.53
CCDC40-215ENST00000576033 EVI2AP22794 236 aa5.51□□□□□ -1.53
CCDC40-215ENST00000576033 LINC00315P59091 139 aa5.51□□□□□ -1.53
CCDC40-215ENST00000576033 CDPF1Q6NVV7 123 aa5.51□□□□□ -1.53
CCDC40-215ENST00000576033 Q6ZSN1 163 aa5.51□□□□□ -1.53
CCDC40-215ENST00000576033 Q8N976 141 aa5.51□□□□□ -1.53
CCDC40-215ENST00000576033 VSIG2Q96IQ7 327 aa5.51□□□□□ -1.53
CCDC40-215ENST00000576033 SAMD10Q9BYL1 202 aa5.51□□□□□ -1.53
CCDC40-215ENST00000576033 KIF25-AS1Q9Y6Z4 181 aa5.51□□□□□ -1.53
CCDC40-215ENST00000576033 M0R2P5 195 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 NPYP01303 97 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 LINC00614P0C842 121 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 PMCHP20382 165 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 AMTP48728 403 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 FHL2Q14192 279 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 ZNF876PQ49A33 203 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 SPANXN1Q5VSR9 72 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 NRACQ8N912 160 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 PTH2Q96A98 100 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 MRAP2Q96G30 205 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 PRELID3AQ96N28 172 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 NDUFAF3Q9BU61 184 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 Q9UF83 564 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 PKD1P98161 4303 aa5.5□□□□□ -1.53
CCDC40-215ENST00000576033 IGLV2-18A0A075B6J9 118 aa5.49□□□□□ -1.53
CCDC40-215ENST00000576033 A0A096LNJ9 63 aa5.49□□□□□ -1.53
CCDC40-215ENST00000576033 IGHV1-24A0A0C4DH33 117 aa5.49□□□□□ -1.53
CCDC40-215ENST00000576033 M0R381 172 aa5.49□□□□□ -1.53
CCDC40-215ENST00000576033 HSBP1O75506 76 aa5.49□□□□□ -1.53
CCDC40-215ENST00000576033 GAS8-AS1O95177 125 aa5.49□□□□□ -1.53
CCDC40-215ENST00000576033 S100A4P26447 101 aaKnown RBP5.49□□□□□ -1.53
CCDC40-215ENST00000576033 PIK3CD-AS1Q5SR53 167 aa5.49□□□□□ -1.53
CCDC40-215ENST00000576033 CFAP126Q5VTH2 177 aa5.49□□□□□ -1.53
CCDC40-215ENST00000576033 RNASEKQ6P5S7 137 aaKnown RBP5.49□□□□□ -1.53
CCDC40-215ENST00000576033 RASL10AQ92737 203 aa5.49□□□□□ -1.53
CCDC40-215ENST00000576033 DPH3P1Q9H4G8 78 aa5.49□□□□□ -1.53
CCDC40-215ENST00000576033 PHLDA3Q9Y5J5 127 aa5.49□□□□□ -1.53
CCDC40-215ENST00000576033 DNAH11Q96DT5 4516 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 A0A087WWL8 130 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 TRAV4A0A0B4J268 109 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 SMKR1H3BMG3 65 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 TNFRSF6BO95407 300 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 NCR2O95944 276 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 P0DMU3 169 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 FAM231AP0DMU4 169 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 FAM231CP0DMU5 169 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 CKS2P33552 79 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 CRYBA4P53673 196 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 LGALS9BQ3B8N2 356 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 SMIM15Q7Z3B0 74 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 FAM19A2Q8N3H0 131 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 C14orf178Q8N769 122 aaPredicted RBP5.48□□□□□ -1.53
CCDC40-215ENST00000576033 C18orf15Q96N68 181 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 AP1S3Q96PC3 154 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 SPXQ9BT56 116 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 NIT2Q9NQR4 276 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 AP5S1Q9NUS5 200 aa5.48□□□□□ -1.53
CCDC40-215ENST00000576033 EPPK1P58107 5090 aaKnown RBP5.47□□□□□ -1.53
CCDC40-215ENST00000576033 TRGV4A0A0C4DH28 118 aa5.47□□□□□ -1.53
CCDC40-215ENST00000576033 RS1O15537 224 aa5.47□□□□□ -1.53
CCDC40-215ENST00000576033 C3orf79P0CE67 100 aa5.47□□□□□ -1.53
CCDC40-215ENST00000576033 GATA1P15976 413 aaPredicted RBP5.47□□□□□ -1.53
CCDC40-215ENST00000576033 IFI27P40305 119 aaPredicted RBP5.47□□□□□ -1.53
CCDC40-215ENST00000576033 RPL32P62910 135 aaKnown RBP5.47□□□□□ -1.53
CCDC40-215ENST00000576033 S100A12P80511 92 aa5.47□□□□□ -1.53
CCDC40-215ENST00000576033 FAM74A4Q5TZK3 123 aa5.47□□□□□ -1.53
CCDC40-215ENST00000576033 UFSP1Q6NVU6 142 aa5.47□□□□□ -1.53
CCDC40-215ENST00000576033 TEX43Q6ZNM6 134 aa5.47□□□□□ -1.53
CCDC40-215ENST00000576033 OR4C5Q8NGB2 326 aa5.47□□□□□ -1.53
CCDC40-215ENST00000576033 LINC00588Q9Y4M8 146 aa5.47□□□□□ -1.53
CCDC40-215ENST00000576033 M0R2N4 97 aa5.46□□□□□ -1.54
CCDC40-215ENST00000576033 PAX4O43316 350 aa5.46□□□□□ -1.54
CCDC40-215ENST00000576033 CRYGDP07320 174 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms