RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 A6NDN8 102 aa4.98□□□□□ -1.61
SMG6-217ENST00000575338 RBMY1EA6NEQ0 496 aaKnown RBP4.98□□□□□ -1.61
SMG6-217ENST00000575338 RBMY1DP0C7P1 496 aaKnown RBP4.98□□□□□ -1.61
SMG6-217ENST00000575338 NMUP48645 174 aa4.98□□□□□ -1.61
SMG6-217ENST00000575338 BEAN1Q3B7T3 259 aa4.98□□□□□ -1.61
SMG6-217ENST00000575338 ZC2HC1BQ5TFG8 222 aa4.98□□□□□ -1.61
SMG6-217ENST00000575338 NEXN-AS1Q8NBZ9 246 aa4.98□□□□□ -1.61
SMG6-217ENST00000575338 HIGD1BQ9P298 99 aa4.98□□□□□ -1.61
SMG6-217ENST00000575338 DKK2Q9UBU2 259 aa4.98□□□□□ -1.61
SMG6-217ENST00000575338 TP53TG1Q9Y2A0 90 aa4.98□□□□□ -1.61
SMG6-217ENST00000575338 ZANQ9Y493 2812 aa4.98□□□□□ -1.61
SMG6-217ENST00000575338 TRBV10-1A0A0K0K1A3 114 aa4.97□□□□□ -1.61
SMG6-217ENST00000575338 A0A1B0GV90 55 aa4.97□□□□□ -1.61
SMG6-217ENST00000575338 RS1O15537 224 aa4.97□□□□□ -1.61
SMG6-217ENST00000575338 IGHV3-53P01767 116 aa4.97□□□□□ -1.61
SMG6-217ENST00000575338 RBMY1A1P0DJD3 496 aaKnown RBP4.97□□□□□ -1.61
SMG6-217ENST00000575338 RBMY1CP0DJD4 496 aa4.97□□□□□ -1.61
SMG6-217ENST00000575338 HSD52Q0P140 79 aa4.97□□□□□ -1.61
SMG6-217ENST00000575338 RBMY1FQ15415 496 aaKnown RBP4.97□□□□□ -1.61
SMG6-217ENST00000575338 ANKRD39Q53RE8 183 aa4.97□□□□□ -1.61
SMG6-217ENST00000575338 C11orf72Q8NBR9 251 aa4.97□□□□□ -1.61
SMG6-217ENST00000575338 OR11H2Q8NH07 326 aa4.97□□□□□ -1.61
SMG6-217ENST00000575338 BAALCQ8WXS3 180 aa4.97□□□□□ -1.61
SMG6-217ENST00000575338 JPT2Q9H910 190 aa4.97□□□□□ -1.61
SMG6-217ENST00000575338 MRPL35Q9NZE8 188 aaKnown RBP4.97□□□□□ -1.61
SMG6-217ENST00000575338 XCL2Q9UBD3 114 aa4.97□□□□□ -1.61
SMG6-217ENST00000575338 ZMAT5Q9UDW3 170 aaKnown RBP4.97□□□□□ -1.61
SMG6-217ENST00000575338 HIVEP2P31629 2446 aa4.96□□□□□ -1.61
SMG6-217ENST00000575338 TRAV4A0A0B4J268 109 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 ADARB2-AS1A8MUL3 147 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 SPRY2O43597 315 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 CRLF1O75462 422 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 AZU1P20160 251 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 HINT1P49773 126 aaPredicted RBP4.96□□□□□ -1.62
SMG6-217ENST00000575338 DAZ2Q13117 558 aaKnown RBP4.96□□□□□ -1.62
SMG6-217ENST00000575338 ZNF124Q15973 351 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 TAL2Q16559 108 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 CFAP126Q5VTH2 177 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 LINC00482Q8N8I6 264 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 C20orf203Q8NBC4 194 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 OR4C5Q8NGB2 326 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 HHLA3Q9XRX5 114 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 PYGO1Q9Y3Y4 419 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 NACAE9PAV3 2078 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 SORL1Q92673 2214 aa4.96□□□□□ -1.62
SMG6-217ENST00000575338 CCDC168Q8NDH2 2452 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 SMIM9A6NGZ8 99 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 PRSS29PA6NIE9 313 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 IGIPA6NJ69 53 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 INAFM1C9JVW0 142 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 E9PLD3 99 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 RPL36AP83881 106 aaKnown RBP4.95□□□□□ -1.62
SMG6-217ENST00000575338 GAGE1Q13065 139 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 COTL1Q14019 142 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 RRN3P1Q2M238 152 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 MPV17L2Q567V2 206 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 BVES-AS1Q5T3Y7 98 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 C1orf158Q8N1D5 194 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 STPG4Q8N801 248 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 IL17DQ8TAD2 202 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 RNASE8Q8TDE3 154 aaKnown RBP4.95□□□□□ -1.62
SMG6-217ENST00000575338 ORAOV1Q8WV07 137 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 RPL36ALQ969Q0 106 aaKnown RBP4.95□□□□□ -1.62
SMG6-217ENST00000575338 SPANXA1Q9NS26 97 aa4.95□□□□□ -1.62
SMG6-217ENST00000575338 WNK1Q9H4A3 2382 aa4.94□□□□□ -1.62
SMG6-217ENST00000575338 TLN2Q9Y4G6 2542 aa4.94□□□□□ -1.62
SMG6-217ENST00000575338 IGHV3OR16-12A0A075B7B8 117 aa4.94□□□□□ -1.62
SMG6-217ENST00000575338 TRGV1A0A0A0MS02 117 aa4.94□□□□□ -1.62
SMG6-217ENST00000575338 C11orf86A6NJI1 115 aa4.94□□□□□ -1.62
SMG6-217ENST00000575338 TSHBP01222 138 aa4.94□□□□□ -1.62
SMG6-217ENST00000575338 FGF6P10767 208 aa4.94□□□□□ -1.62
SMG6-217ENST00000575338 UFSP1Q6NVU6 142 aa4.94□□□□□ -1.62
SMG6-217ENST00000575338 DAZ4Q86SG3 579 aaKnown RBP4.94□□□□□ -1.62
SMG6-217ENST00000575338 SMR3AQ99954 134 aa4.94□□□□□ -1.62
SMG6-217ENST00000575338 VCX2Q9H322 139 aa4.94□□□□□ -1.62
SMG6-217ENST00000575338 CST9LQ9H4G1 147 aa4.94□□□□□ -1.62
SMG6-217ENST00000575338 DAZ3Q9NR90 486 aaKnown RBP4.94□□□□□ -1.62
SMG6-217ENST00000575338 F8P00451 2351 aa4.94□□□□□ -1.62
SMG6-217ENST00000575338 SONP18583 2426 aaKnown RBP4.93□□□□□ -1.62
SMG6-217ENST00000575338 TRBV7-3A0A075B6L6 115 aa4.93□□□□□ -1.62
SMG6-217ENST00000575338 TMEM238LA0A1B0GVL6 79 aa4.93□□□□□ -1.62
SMG6-217ENST00000575338 A6NJY4 79 aa4.93□□□□□ -1.62
SMG6-217ENST00000575338 K7EQD1 137 aa4.93□□□□□ -1.62
SMG6-217ENST00000575338 ZNF25P17030 456 aaPredicted RBP4.93□□□□□ -1.62
SMG6-217ENST00000575338 APOC4P55056 127 aa4.93□□□□□ -1.62
SMG6-217ENST00000575338 C2orf91Q6ZV80 131 aa4.93□□□□□ -1.62
SMG6-217ENST00000575338 NFE4Q86UQ8 179 aa4.93□□□□□ -1.62
SMG6-217ENST00000575338 LINC00469Q8N7U9 141 aa4.93□□□□□ -1.62
SMG6-217ENST00000575338 OVOL2Q9BRP0 275 aa4.93□□□□□ -1.62
SMG6-217ENST00000575338 TIMM21Q9BVV7 248 aa4.93□□□□□ -1.62
SMG6-217ENST00000575338 MRPL16Q9NX20 251 aaKnown RBP4.93□□□□□ -1.62
SMG6-217ENST00000575338 COX11Q9Y6N1 276 aa4.93□□□□□ -1.62
SMG6-217ENST00000575338 ZNF469Q96JG9 3925 aaPredicted RBP4.92□□□□□ -1.62
SMG6-217ENST00000575338 TRBV25-1A0A075B6N4 114 aa4.92□□□□□ -1.62
SMG6-217ENST00000575338 TRGV2A0A075B6R0 118 aa4.92□□□□□ -1.62
SMG6-217ENST00000575338 TRAV8-6A0A0B4J262 113 aa4.92□□□□□ -1.62
SMG6-217ENST00000575338 MYMXA0A1B0GTQ4 84 aa4.92□□□□□ -1.62
SMG6-217ENST00000575338 TRBV6-4A0A1B0GX49 114 aa4.92□□□□□ -1.62
SMG6-217ENST00000575338 H7C423 109 aa4.92□□□□□ -1.62
SMG6-217ENST00000575338 RPL35AP18077 110 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms