RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 ZNF471Q9BX82 626 aaPredicted RBP6.76□□□□□ -1.33
TVP23B-208ENST00000575261 SNAI2O43623 268 aa6.75□□□□□ -1.33
TVP23B-208ENST00000575261 S100A9P06702 114 aaKnown RBP6.75□□□□□ -1.33
TVP23B-208ENST00000575261 RPL19P84098 196 aaKnown RBP6.75□□□□□ -1.33
TVP23B-208ENST00000575261 SPANXN1Q5VSR9 72 aa6.75□□□□□ -1.33
TVP23B-208ENST00000575261 DGAT2L7PQ6IED9 249 aa6.75□□□□□ -1.33
TVP23B-208ENST00000575261 PLA2G2DQ9UNK4 145 aa6.75□□□□□ -1.33
TVP23B-208ENST00000575261 TRBV25-1A0A075B6N4 114 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 A0A1B0GVG6 124 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 F5H697 171 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 ARPC5O15511 151 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 PAGE4O60829 102 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 PFDN1O60925 122 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 PRSS1P07477 247 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 OR5AL1P0C617 328 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 SMIM17P0DL12 118 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 CLPSL2Q6UWE3 100 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 C9orf163Q8N9P6 203 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 AP1S3Q96PC3 154 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 SSBP4Q9BWG4 385 aaPredicted RBP6.74□□□□□ -1.33
TVP23B-208ENST00000575261 CYTL1Q9NRR1 136 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 PRR34Q9NV39 138 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 VAX2Q9UIW0 290 aa6.74□□□□□ -1.33
TVP23B-208ENST00000575261 SCO2A0A1W2PP80 73 aa6.73□□□□□ -1.33
TVP23B-208ENST00000575261 G3V3Q6 166 aa6.73□□□□□ -1.33
TVP23B-208ENST00000575261 RBX1P62877 108 aa6.73□□□□□ -1.33
TVP23B-208ENST00000575261 NTM-AS1Q6ZSK4 140 aa6.73□□□□□ -1.33
TVP23B-208ENST00000575261 BAGE2Q86Y30 109 aa6.73□□□□□ -1.33
TVP23B-208ENST00000575261 DERL1Q9BUN8 251 aa6.73□□□□□ -1.33
TVP23B-208ENST00000575261 MLST8Q9BVC4 326 aa6.73□□□□□ -1.33
TVP23B-208ENST00000575261 MUC21A0A0G2JKD1 596 aa6.72□□□□□ -1.33
TVP23B-208ENST00000575261 MUC21A0A140T8X8 626 aa6.72□□□□□ -1.33
TVP23B-208ENST00000575261 HNRNPA3P51991 378 aaKnown RBP6.72□□□□□ -1.33
TVP23B-208ENST00000575261 GAGE6Q13070 117 aa6.72□□□□□ -1.33
TVP23B-208ENST00000575261 LINC00269Q8N2A0 174 aa6.72□□□□□ -1.33
TVP23B-208ENST00000575261 SFT2D1Q8WV19 159 aa6.72□□□□□ -1.33
TVP23B-208ENST00000575261 DAZAP1Q96EP5 407 aaKnown RBP6.72□□□□□ -1.33
TVP23B-208ENST00000575261 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
TVP23B-208ENST00000575261 IGHV1-24A0A0C4DH33 117 aa6.71□□□□□ -1.34
TVP23B-208ENST00000575261 A0A1B0GV50 99 aa6.71□□□□□ -1.34
TVP23B-208ENST00000575261 UMAD1C9J7I0 102 aa6.71□□□□□ -1.34
TVP23B-208ENST00000575261 H7C1H1 209 aa6.71□□□□□ -1.34
TVP23B-208ENST00000575261 SSTP61278 116 aa6.71□□□□□ -1.34
TVP23B-208ENST00000575261 IQCJQ1A5X6 159 aa6.71□□□□□ -1.34
TVP23B-208ENST00000575261 KRTAP26-1Q6PEX3 210 aa6.71□□□□□ -1.34
TVP23B-208ENST00000575261 CLRN3Q8NCR9 226 aa6.71□□□□□ -1.34
TVP23B-208ENST00000575261 FAM213BQ8TBF2 198 aa6.71□□□□□ -1.34
TVP23B-208ENST00000575261 A0A0D9SG52 128 aa6.7□□□□□ -1.34
TVP23B-208ENST00000575261 CNBPP62633 177 aaKnown RBP6.7□□□□□ -1.34
TVP23B-208ENST00000575261 REG3AQ06141 175 aa6.7□□□□□ -1.34
TVP23B-208ENST00000575261 ZNF345Q14585 488 aa6.7□□□□□ -1.34
TVP23B-208ENST00000575261 MBD3L1Q8WWY6 194 aa6.7□□□□□ -1.34
TVP23B-208ENST00000575261 KIF25-AS1Q9Y6Z4 181 aa6.7□□□□□ -1.34
TVP23B-208ENST00000575261 IGLV10-54A0A075B6I4 117 aa6.69□□□□□ -1.34
TVP23B-208ENST00000575261 TRAV8-4A0A0B4J246 113 aa6.69□□□□□ -1.34
TVP23B-208ENST00000575261 hDV102S1A0JD36 115 aa6.69□□□□□ -1.34
TVP23B-208ENST00000575261 PANO1I0J062 215 aa6.69□□□□□ -1.34
TVP23B-208ENST00000575261 P01737 135 aa6.69□□□□□ -1.34
TVP23B-208ENST00000575261 MGPP08493 103 aa6.69□□□□□ -1.34
TVP23B-208ENST00000575261 RPL35P42766 123 aaKnown RBP6.69□□□□□ -1.34
TVP23B-208ENST00000575261 SDIM1Q6ZPB5 146 aa6.69□□□□□ -1.34
TVP23B-208ENST00000575261 TMUB2Q71RG4 321 aa6.69□□□□□ -1.34
TVP23B-208ENST00000575261 KCNRGQ8N5I3 272 aa6.69□□□□□ -1.34
TVP23B-208ENST00000575261 TPPP3Q9BW30 176 aa6.69□□□□□ -1.34
TVP23B-208ENST00000575261 hCG_2014768A0A024R1R8 64 aa6.68□□□□□ -1.34
TVP23B-208ENST00000575261 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.68□□□□□ -1.34
TVP23B-208ENST00000575261 M0QY20 66 aa6.68□□□□□ -1.34
TVP23B-208ENST00000575261 CIRBPQ14011 172 aaKnown RBP6.68□□□□□ -1.34
TVP23B-208ENST00000575261 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
TVP23B-208ENST00000575261 SUMO4Q6EEV6 95 aa6.68□□□□□ -1.34
TVP23B-208ENST00000575261 FER1L6-AS1Q8NA97 138 aa6.68□□□□□ -1.34
TVP23B-208ENST00000575261 C20orf203Q8NBC4 194 aa6.68□□□□□ -1.34
TVP23B-208ENST00000575261 TMEM243Q9BU79 118 aa6.68□□□□□ -1.34
TVP23B-208ENST00000575261 AP5S1Q9NUS5 200 aa6.68□□□□□ -1.34
TVP23B-208ENST00000575261 TNXBP22105 4242 aa6.67□□□□□ -1.34
TVP23B-208ENST00000575261 IGHV3-64A0A075B6Q5 118 aa6.67□□□□□ -1.34
TVP23B-208ENST00000575261 A0A1B0GUV1 79 aa6.67□□□□□ -1.34
TVP23B-208ENST00000575261 SMLR1H3BR10 107 aa6.67□□□□□ -1.34
TVP23B-208ENST00000575261 H2AFB1P0C5Y9 115 aa6.67□□□□□ -1.34
TVP23B-208ENST00000575261 IGLC6P0CF74 106 aa6.67□□□□□ -1.34
TVP23B-208ENST00000575261 RPS20P60866 119 aaKnown RBP6.67□□□□□ -1.34
TVP23B-208ENST00000575261 WDR73Q6P4I2 378 aa6.67□□□□□ -1.34
TVP23B-208ENST00000575261 Q6ZRU5 148 aa6.67□□□□□ -1.34
TVP23B-208ENST00000575261 C11orf52Q96A22 123 aa6.67□□□□□ -1.34
TVP23B-208ENST00000575261 RNF185Q96GF1 192 aa6.67□□□□□ -1.34
TVP23B-208ENST00000575261 MANBALQ9NQG1 85 aa6.67□□□□□ -1.34
TVP23B-208ENST00000575261 KANTRA0A1W2PQU2 76 aa6.66□□□□□ -1.34
TVP23B-208ENST00000575261 UBE2L6O14933 153 aa6.66□□□□□ -1.34
TVP23B-208ENST00000575261 BCL2L11O43521 198 aa6.66□□□□□ -1.34
TVP23B-208ENST00000575261 MT1HL1P0DM35 61 aa6.66□□□□□ -1.34
TVP23B-208ENST00000575261 GZMBP10144 247 aa6.66□□□□□ -1.34
TVP23B-208ENST00000575261 NKX2-5P52952 324 aaPredicted RBP6.66□□□□□ -1.34
TVP23B-208ENST00000575261 CACNG7P62955 275 aa6.66□□□□□ -1.34
TVP23B-208ENST00000575261 CENPWQ5EE01 88 aa6.66□□□□□ -1.34
TVP23B-208ENST00000575261 RASL11AQ6T310 242 aa6.66□□□□□ -1.34
TVP23B-208ENST00000575261 OR2D3Q8NGH3 330 aa6.66□□□□□ -1.34
TVP23B-208ENST00000575261 PGLYRP4Q96LB8 373 aa6.66□□□□□ -1.34
TVP23B-208ENST00000575261 IGLV4-60A0A075B6I1 120 aa6.65□□□□□ -1.34
TVP23B-208ENST00000575261 XKRY2A2RUG3 117 aa6.65□□□□□ -1.34
TVP23B-208ENST00000575261 HMSDA8MTL9 139 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms