RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 A0A1B0GW54 56 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 K7EM74 188 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 ARMS2P0C7Q2 107 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 IFI27P40305 119 aaPredicted RBP3.2□□□□□ -1.9
TSR1-203ENST00000575049 FXYD2P54710 66 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 TSPEAR-AS2P59090 65 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 WT1-ASQ06250 92 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 WFDC2Q14508 124 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 AMTNQ6UX39 209 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 TTC9CQ8N5M4 171 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 MIR7-3HGQ8N6C7 128 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 RAB37Q96AX2 223 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 PRELID3AQ96N28 172 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 NAA38Q9BRA0 125 aaKnown RBP3.2□□□□□ -1.9
TSR1-203ENST00000575049 PRO0461Q9UI25 63 aa3.2□□□□□ -1.9
TSR1-203ENST00000575049 TRGV5A0A0B4J1U4 118 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 A6NED7 52 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 BUB1B-PAK6H3BSN5 160 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 LECT2O14960 151 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 IGKV1-16P04430 117 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 PRM2P04554 102 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 FCER1GP30273 86 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 INSL3P51460 131 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 DSCR10P59022 87 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 DEFB116Q30KQ4 102 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 Q5W150 140 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 ZNF418Q8TF45 676 aaPredicted RBP3.19□□□□□ -1.9
TSR1-203ENST00000575049 LEAP2Q969E1 77 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 UPK3BQ9BT76 320 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 MRPL16Q9NX20 251 aaKnown RBP3.19□□□□□ -1.9
TSR1-203ENST00000575049 MRPL36Q9P0J6 103 aaKnown RBP3.19□□□□□ -1.9
TSR1-203ENST00000575049 HHLA3Q9XRX5 114 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 HIGD1AQ9Y241 93 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 LINC00312Q9Y6C7 94 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 PCDH15Q96QU1 1955 aa3.19□□□□□ -1.9
TSR1-203ENST00000575049 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.18□□□□□ -1.9
TSR1-203ENST00000575049 TRBV25-1A0A075B6N4 114 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 IGHV1-18A0A0C4DH31 117 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 C9JAW5 83 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 D6R8Y8 96 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 E7EUB6 86 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 H3BMM0 161 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 OVOL1O14753 267 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 UBE2L6O14933 153 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 ZNF861PO60384 105 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 DPM2O94777 84 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 IGKCP01834 107 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 IGHV3-30-3P0DP02 117 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 CRIP1P50238 77 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 GTF3C1Q12789 2109 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 KLRD1Q13241 179 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 RRN3P1Q2M238 152 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 VMA21Q3ZAQ7 101 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 PRR15Q8IV56 129 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 LINC00311Q8N616 119 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 SPANXA2-OT1Q8N9U9 137 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 DCANP1Q8TF63 244 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 UBE2WQ96B02 151 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 GAFA1Q96PS6 74 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 NXT2Q9NPJ8 142 aaKnown RBP3.18□□□□□ -1.9
TSR1-203ENST00000575049 SMAD5-AS1Q9Y6J3 95 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 HTTP42858 3142 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 KIAA1549Q9HCM3 1950 aa3.18□□□□□ -1.9
TSR1-203ENST00000575049 CENPFP49454 3210 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 MYO7BQ6PIF6 2116 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 TDRD6O60522 2096 aaKnown RBP3.17□□□□□ -1.9
TSR1-203ENST00000575049 TRBV7-3A0A075B6L6 115 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 IGKV2D-26A0A0A0MRZ7 120 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 H3BMG7 143 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 H3BRN7 92 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 SLC25A20O43772 301 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 SH2D1AO60880 128 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 LYZL6O75951 148 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 NPYP01303 97 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 IGLC6P0CF74 106 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 RPL27AP46776 148 aaKnown RBP3.17□□□□□ -1.9
TSR1-203ENST00000575049 ETDBQ3ZM63 59 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 C10orf55Q5SWW7 151 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 LYZL1Q6UWQ5 148 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 RNF5Q99942 180 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 CNFNQ9BYD5 112 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 NHP2Q9NX24 153 aaKnown RBP3.17□□□□□ -1.9
TSR1-203ENST00000575049 TIMM8BQ9Y5J9 83 aaPredicted RBP3.17□□□□□ -1.9
TSR1-203ENST00000575049 CEP350Q5VT06 3117 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 RP1P56715 2156 aa3.17□□□□□ -1.9
TSR1-203ENST00000575049 IGLV3-9A0A075B6K5 115 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 TRAV12-1A0A0B4J245 112 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 SPAARA0A1B0GVQ0 90 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 K7ERJ3 54 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 PSMB8P28062 276 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 CKS2P33552 79 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 PDE6HQ13956 83 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 PLGLAQ15195 96 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 SPRNQ5BIV9 151 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 CFAP126Q5VTH2 177 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 SH2D6Q7Z4S9 175 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 SBSPONQ8IVN8 264 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 Q8N8P6 123 aa3.16□□□□□ -1.9
TSR1-203ENST00000575049 TMEM133Q9H2Q1 129 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms