RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TRPT1Q86TN4 253 aaKnown RBP14.09□□□□□ -0.15
SCARF1-206ENST00000573852 TMEM223A0PJW6 202 aa14.08□□□□□ -0.15
SCARF1-206ENST00000573852 K7EQG2 157 aa14.08□□□□□ -0.15
SCARF1-206ENST00000573852 SNRPD3P62318 126 aaKnown RBP14.08□□□□□ -0.15
SCARF1-206ENST00000573852 TGFAP01135 160 aa14.08□□□□□ -0.16
SCARF1-206ENST00000573852 LYRM7Q5U5X0 104 aa14.08□□□□□ -0.16
SCARF1-206ENST00000573852 CARD19Q96LW7 228 aa14.08□□□□□ -0.16
SCARF1-206ENST00000573852 CDIP1Q9H305 208 aa14.08□□□□□ -0.16
SCARF1-206ENST00000573852 PRO1854Q9UHT4 67 aa14.08□□□□□ -0.16
SCARF1-206ENST00000573852 IGHV3-64A0A075B6Q5 118 aa14.08□□□□□ -0.16
SCARF1-206ENST00000573852 CKS1BP61024 79 aa14.08□□□□□ -0.16
SCARF1-206ENST00000573852 C20orf203Q8NBC4 194 aa14.08□□□□□ -0.16
SCARF1-206ENST00000573852 SVIPQ8NHG7 77 aa14.08□□□□□ -0.16
SCARF1-206ENST00000573852 LEPROTO15243 131 aa14.07□□□□□ -0.16
SCARF1-206ENST00000573852 EIF4EBP3O60516 100 aaPredicted RBP14.07□□□□□ -0.16
SCARF1-206ENST00000573852 IGHV4-59P01825 116 aa14.07□□□□□ -0.16
SCARF1-206ENST00000573852 FHL3Q13643 280 aa14.07□□□□□ -0.16
SCARF1-206ENST00000573852 ZNF580Q9UK33 172 aa14.07□□□□□ -0.16
SCARF1-206ENST00000573852 ZNF22P17026 224 aaPredicted RBP14.07□□□□□ -0.16
SCARF1-206ENST00000573852 DOPEY2Q9Y3R5 2298 aa14.06□□□□□ -0.16
SCARF1-206ENST00000573852 A4D1N5 150 aa14.06□□□□□ -0.16
SCARF1-206ENST00000573852 TRBV20-1A0A075B6N2 111 aa14.05□□□□□ -0.16
SCARF1-206ENST00000573852 A0A0J9YXV3 536 aa14.05□□□□□ -0.16
SCARF1-206ENST00000573852 I3L3M4 83 aa14.05□□□□□ -0.16
SCARF1-206ENST00000573852 RHODO00212 210 aa14.05□□□□□ -0.16
SCARF1-206ENST00000573852 IGLV4-3A0A075B6K6 122 aa14.04□□□□□ -0.16
SCARF1-206ENST00000573852 TRAV26-1A0A087WT03 109 aa14.04□□□□□ -0.16
SCARF1-206ENST00000573852 SCGB1C2P0DMR2 95 aa14.04□□□□□ -0.16
SCARF1-206ENST00000573852 SYNJ2BPP57105 145 aa14.04□□□□□ -0.16
SCARF1-206ENST00000573852 TEN1Q86WV5 123 aa14.04□□□□□ -0.16
SCARF1-206ENST00000573852 SBSPONQ8IVN8 264 aa14.04□□□□□ -0.16
SCARF1-206ENST00000573852 PRORYQ9H606 182 aa14.04□□□□□ -0.16
SCARF1-206ENST00000573852 DEFB112Q30KQ8 113 aa14.04□□□□□ -0.16
SCARF1-206ENST00000573852 RAX2Q96IS3 184 aa14.04□□□□□ -0.16
SCARF1-206ENST00000573852 DUX5Q96PT3 197 aa14.04□□□□□ -0.16
SCARF1-206ENST00000573852 PPDPFLQ8WWR9 84 aa14.03□□□□□ -0.16
SCARF1-206ENST00000573852 TRAV2A0A0B4J234 112 aa14.02□□□□□ -0.16
SCARF1-206ENST00000573852 VCX2Q9H322 139 aa14.02□□□□□ -0.16
SCARF1-206ENST00000573852 B4DSR2 109 aa14.02□□□□□ -0.17
SCARF1-206ENST00000573852 MUSTN1Q8IVN3 82 aa14.02□□□□□ -0.17
SCARF1-206ENST00000573852 TMEM263Q8WUH6 116 aaKnown RBP14.02□□□□□ -0.17
SCARF1-206ENST00000573852 A8MWV9 139 aa14.01□□□□□ -0.17
SCARF1-206ENST00000573852 IGHV3-33P01772 117 aa14.01□□□□□ -0.17
SCARF1-206ENST00000573852 RBMY1A1P0DJD3 496 aaKnown RBP14.01□□□□□ -0.17
SCARF1-206ENST00000573852 RBMY1CP0DJD4 496 aa14.01□□□□□ -0.17
SCARF1-206ENST00000573852 RBMY1FQ15415 496 aaKnown RBP14.01□□□□□ -0.17
SCARF1-206ENST00000573852 IGHV3-73A0A0B4J1V6 119 aa14□□□□□ -0.17
SCARF1-206ENST00000573852 PROK1P58294 105 aa14□□□□□ -0.17
SCARF1-206ENST00000573852 FAM104AQ969W3 186 aa14□□□□□ -0.17
SCARF1-206ENST00000573852 CFAP46Q8IYW2 2715 aa14□□□□□ -0.17
SCARF1-206ENST00000573852 FLNCQ14315 2725 aa14□□□□□ -0.17
SCARF1-206ENST00000573852 H7C2G1 150 aa13.99□□□□□ -0.17
SCARF1-206ENST00000573852 CRYBA4P53673 196 aa13.99□□□□□ -0.17
SCARF1-206ENST00000573852 CSMD2Q7Z408 3487 aa13.99□□□□□ -0.17
SCARF1-206ENST00000573852 MT-ATP8P03928 68 aa13.99□□□□□ -0.17
SCARF1-206ENST00000573852 HTN1P15515 57 aa13.99□□□□□ -0.17
SCARF1-206ENST00000573852 ANKRD29Q8N6D5 301 aa13.99□□□□□ -0.17
SCARF1-206ENST00000573852 TRGV11A0A075B6L2 103 aa13.98□□□□□ -0.17
SCARF1-206ENST00000573852 SPXQ9BT56 116 aa13.98□□□□□ -0.17
SCARF1-206ENST00000573852 UTP20O75691 2785 aaKnown RBP13.98□□□□□ -0.17
SCARF1-206ENST00000573852 XGP55808 180 aa13.98□□□□□ -0.17
SCARF1-206ENST00000573852 CREBBPQ92793 2442 aa13.98□□□□□ -0.17
SCARF1-206ENST00000573852 A0A0J9YXY3 114 aa13.98□□□□□ -0.17
SCARF1-206ENST00000573852 TMEM89A2RUT3 159 aa13.98□□□□□ -0.17
SCARF1-206ENST00000573852 ADARB2-AS1A8MUL3 147 aa13.98□□□□□ -0.17
SCARF1-206ENST00000573852 M0R2P5 195 aa13.98□□□□□ -0.17
SCARF1-206ENST00000573852 SPINK8P0C7L1 97 aa13.98□□□□□ -0.17
SCARF1-206ENST00000573852 TCTEX1D4Q5JR98 221 aa13.98□□□□□ -0.17
SCARF1-206ENST00000573852 CEMP1Q6PRD7 247 aaPredicted RBP13.98□□□□□ -0.17
SCARF1-206ENST00000573852 ERG28Q9UKR5 140 aa13.98□□□□□ -0.17
SCARF1-206ENST00000573852 A0A0B4J2C4 111 aa13.97□□□□□ -0.17
SCARF1-206ENST00000573852 PRM2P04554 102 aa13.97□□□□□ -0.17
SCARF1-206ENST00000573852 Q6ZUT4 128 aa13.97□□□□□ -0.17
SCARF1-206ENST00000573852 RNF152Q8N8N0 203 aa13.97□□□□□ -0.17
SCARF1-206ENST00000573852 NRGNQ92686 78 aa13.97□□□□□ -0.17
SCARF1-206ENST00000573852 GEMIN7Q9H840 131 aaKnown RBP13.97□□□□□ -0.17
SCARF1-206ENST00000573852 KNCNA6PVL3 124 aa13.97□□□□□ -0.17
SCARF1-206ENST00000573852 IGHV3-30-3P0DP02 117 aa13.97□□□□□ -0.17
SCARF1-206ENST00000573852 HOXD3P31249 432 aaPredicted RBP13.97□□□□□ -0.17
SCARF1-206ENST00000573852 Q9UF83 564 aa13.97□□□□□ -0.17
SCARF1-206ENST00000573852 ZANQ9Y493 2812 aa13.96□□□□□ -0.17
SCARF1-206ENST00000573852 CD28P10747 220 aa13.96□□□□□ -0.17
SCARF1-206ENST00000573852 RNASE13Q5GAN3 156 aaKnown RBP13.96□□□□□ -0.18
SCARF1-206ENST00000573852 C9JAW5 83 aa13.95□□□□□ -0.18
SCARF1-206ENST00000573852 SLC25A20O43772 301 aa13.95□□□□□ -0.18
SCARF1-206ENST00000573852 ELANEP08246 267 aa13.95□□□□□ -0.18
SCARF1-206ENST00000573852 PYGO1Q9Y3Y4 419 aa13.95□□□□□ -0.18
SCARF1-206ENST00000573852 TRAV8-3A0A0A6YYJ7 113 aa13.95□□□□□ -0.18
SCARF1-206ENST00000573852 PRRC2AP48634 2157 aaKnown RBP13.95□□□□□ -0.18
SCARF1-206ENST00000573852 GATA3P23771 443 aa13.94□□□□□ -0.18
SCARF1-206ENST00000573852 MRPS36P82909 103 aaKnown RBP13.94□□□□□ -0.18
SCARF1-206ENST00000573852 LITAFQ99732 161 aa13.94□□□□□ -0.18
SCARF1-206ENST00000573852 TIMM21Q9BVV7 248 aa13.94□□□□□ -0.18
SCARF1-206ENST00000573852 EDA2RQ9HAV5 297 aa13.93□□□□□ -0.18
SCARF1-206ENST00000573852 NACAE9PAV3 2078 aa13.93□□□□□ -0.18
SCARF1-206ENST00000573852 PKD1L2Q7Z442 2459 aa13.93□□□□□ -0.18
SCARF1-206ENST00000573852 USP9XQ93008 2570 aaPredicted RBP13.93□□□□□ -0.18
SCARF1-206ENST00000573852 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.92□□□□□ -0.18
SCARF1-206ENST00000573852 Q6ZSN1 163 aa13.92□□□□□ -0.18
SCARF1-206ENST00000573852 USP9YO00507 2555 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms