RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 NACAE9PAV3 2078 aa20.96■□□□□ 0.95
CTDNEP1-208ENST00000573600 G0S2P27469 103 aa20.96■□□□□ 0.95
CTDNEP1-208ENST00000573600 H0Y8G0 127 aa20.95■□□□□ 0.94
CTDNEP1-208ENST00000573600 ATP5LO75964 103 aa20.95■□□□□ 0.94
CTDNEP1-208ENST00000573600 PLAC8L1A1L4L8 177 aa20.95■□□□□ 0.94
CTDNEP1-208ENST00000573600 APOC4P55056 127 aa20.94■□□□□ 0.94
CTDNEP1-208ENST00000573600 OR4C5Q8NGB2 326 aa20.94■□□□□ 0.94
CTDNEP1-208ENST00000573600 C18orf15Q96N68 181 aa20.94■□□□□ 0.94
CTDNEP1-208ENST00000573600 OVOL2Q9BRP0 275 aa20.94■□□□□ 0.94
CTDNEP1-208ENST00000573600 NOP10Q9NPE3 64 aaKnown RBP20.94■□□□□ 0.94
CTDNEP1-208ENST00000573600 PAM16Q9Y3D7 125 aa20.94■□□□□ 0.94
CTDNEP1-208ENST00000573600 LINC01549A6NIU2 74 aa20.92■□□□□ 0.94
CTDNEP1-208ENST00000573600 IGHV3-53P01767 116 aa20.92■□□□□ 0.94
CTDNEP1-208ENST00000573600 LGALS9CQ6DKI2 356 aa20.92■□□□□ 0.94
CTDNEP1-208ENST00000573600 Q6ZTI0 123 aa20.92■□□□□ 0.94
CTDNEP1-208ENST00000573600 TOMM6Q96B49 74 aa20.92■□□□□ 0.94
CTDNEP1-208ENST00000573600 VWFP04275 2813 aa20.92■□□□□ 0.94
CTDNEP1-208ENST00000573600 NOTCH3Q9UM47 2321 aa20.92■□□□□ 0.94
CTDNEP1-208ENST00000573600 NEGR1Q7Z3B1 354 aa20.92■□□□□ 0.94
CTDNEP1-208ENST00000573600 ATOH7Q8N100 152 aa20.92■□□□□ 0.94
CTDNEP1-208ENST00000573600 TRAV9-2A0A087WT02 112 aa20.91■□□□□ 0.94
CTDNEP1-208ENST00000573600 TRAV4A0A0B4J268 109 aa20.91■□□□□ 0.94
CTDNEP1-208ENST00000573600 SMIM9A6NGZ8 99 aa20.9■□□□□ 0.94
CTDNEP1-208ENST00000573600 SPATA45Q537H7 98 aa20.9■□□□□ 0.94
CTDNEP1-208ENST00000573600 DNAJC30Q96LL9 226 aa20.9■□□□□ 0.94
CTDNEP1-208ENST00000573600 I3L3M4 83 aa20.89■□□□□ 0.93
CTDNEP1-208ENST00000573600 C2orf66Q6UXQ4 117 aa20.89■□□□□ 0.93
CTDNEP1-208ENST00000573600 TNFRSF18Q9Y5U5 241 aa20.89■□□□□ 0.93
CTDNEP1-208ENST00000573600 CIDEAO60543 219 aa20.88■□□□□ 0.93
CTDNEP1-208ENST00000573600 Q6ZSN1 163 aa20.88■□□□□ 0.93
CTDNEP1-208ENST00000573600 PRSS1P07477 247 aa20.87■□□□□ 0.93
CTDNEP1-208ENST00000573600 RHOHQ15669 191 aa20.87■□□□□ 0.93
CTDNEP1-208ENST00000573600 ZMAT5Q9UDW3 170 aaKnown RBP20.87■□□□□ 0.93
CTDNEP1-208ENST00000573600 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP20.86■□□□□ 0.93
CTDNEP1-208ENST00000573600 RIPPLY3P57055 190 aa20.86■□□□□ 0.93
CTDNEP1-208ENST00000573600 SCGB3A1Q96QR1 104 aa20.86■□□□□ 0.93
CTDNEP1-208ENST00000573600 CYSLTR1Q9Y271 337 aa20.86■□□□□ 0.93
CTDNEP1-208ENST00000573600 P0DMU3 169 aa20.85■□□□□ 0.93
CTDNEP1-208ENST00000573600 FAM231AP0DMU4 169 aa20.85■□□□□ 0.93
CTDNEP1-208ENST00000573600 FAM231CP0DMU5 169 aa20.85■□□□□ 0.93
CTDNEP1-208ENST00000573600 DDTP30046 118 aa20.85■□□□□ 0.93
CTDNEP1-208ENST00000573600 OXLD1Q5BKU9 147 aa20.85■□□□□ 0.93
CTDNEP1-208ENST00000573600 ZNF479Q96JC4 524 aa20.85■□□□□ 0.93
CTDNEP1-208ENST00000573600 NEXN-AS1Q8NBZ9 246 aa20.84■□□□□ 0.93
CTDNEP1-208ENST00000573600 X6R8D5 127 aa20.84■□□□□ 0.93
CTDNEP1-208ENST00000573600 PMCHL2Q9BQD1 86 aa20.84■□□□□ 0.93
CTDNEP1-208ENST00000573600 LINC00587B1AMM8 73 aa20.83■□□□□ 0.92
CTDNEP1-208ENST00000573600 HSBP1L1C9JCN9 74 aa20.83■□□□□ 0.92
CTDNEP1-208ENST00000573600 TRGV2A0A075B6R0 118 aa20.82■□□□□ 0.92
CTDNEP1-208ENST00000573600 GAGE12BA1L429 117 aa20.82■□□□□ 0.92
CTDNEP1-208ENST00000573600 GAGE7O76087 117 aa20.82■□□□□ 0.92
CTDNEP1-208ENST00000573600 GAGE12FP0CL80 117 aa20.82■□□□□ 0.92
CTDNEP1-208ENST00000573600 GAGE12GP0CL81 117 aa20.82■□□□□ 0.92
CTDNEP1-208ENST00000573600 GAGE12IP0CL82 117 aa20.82■□□□□ 0.92
CTDNEP1-208ENST00000573600 IGHV4-30-4P0DP06 118 aa20.82■□□□□ 0.92
CTDNEP1-208ENST00000573600 EGFEM1PQ0D2K5 195 aa20.82■□□□□ 0.92
CTDNEP1-208ENST00000573600 Q6ZN92 141 aa20.82■□□□□ 0.92
CTDNEP1-208ENST00000573600 ERASQ7Z444 233 aa20.82■□□□□ 0.92
CTDNEP1-208ENST00000573600 TSHBP01222 138 aa20.81■□□□□ 0.92
CTDNEP1-208ENST00000573600 MAJINQ3KP22 176 aa20.81■□□□□ 0.92
CTDNEP1-208ENST00000573600 TP53TG1Q9Y2A0 90 aa20.8■□□□□ 0.92
CTDNEP1-208ENST00000573600 TRBV10-1A0A0K0K1A3 114 aa20.79■□□□□ 0.92
CTDNEP1-208ENST00000573600 ODF1Q14990 250 aa20.79■□□□□ 0.92
CTDNEP1-208ENST00000573600 FBN1P35555 2871 aaKnown RBP20.79■□□□□ 0.92
CTDNEP1-208ENST00000573600 DEFB135Q30KP9 77 aa20.78■□□□□ 0.92
CTDNEP1-208ENST00000573600 TRAV12-1A0A0B4J245 112 aa20.78■□□□□ 0.92
CTDNEP1-208ENST00000573600 K7EQD1 137 aa20.78■□□□□ 0.92
CTDNEP1-208ENST00000573600 ZMAT4Q9H898 229 aa20.78■□□□□ 0.92
CTDNEP1-208ENST00000573600 EMP1P54849 157 aa20.77■□□□□ 0.92
CTDNEP1-208ENST00000573600 KRTAP10-11P60412 298 aa20.77■□□□□ 0.92
CTDNEP1-208ENST00000573600 MIEN1Q9BRT3 115 aa20.77■□□□□ 0.92
CTDNEP1-208ENST00000573600 TRRAPQ9Y4A5 3859 aa20.77■□□□□ 0.91
CTDNEP1-208ENST00000573600 hDV102S1A0JD36 115 aa20.76■□□□□ 0.91
CTDNEP1-208ENST00000573600 DEFB104AQ8WTQ1 72 aa20.76■□□□□ 0.91
CTDNEP1-208ENST00000573600 DKK2Q9UBU2 259 aa20.76■□□□□ 0.91
CTDNEP1-208ENST00000573600 LINC00612Q8N6U2 182 aa20.75■□□□□ 0.91
CTDNEP1-208ENST00000573600 TMEM141Q96I45 108 aa20.75■□□□□ 0.91
CTDNEP1-208ENST00000573600 TIMM17AQ99595 171 aa20.75■□□□□ 0.91
CTDNEP1-208ENST00000573600 Q9UF83 564 aa20.75■□□□□ 0.91
CTDNEP1-208ENST00000573600 A0A087WX48 190 aa20.75■□□□□ 0.91
CTDNEP1-208ENST00000573600 IGLC3P0DOY3 106 aa20.74■□□□□ 0.91
CTDNEP1-208ENST00000573600 C20orf203Q8NBC4 194 aa20.74■□□□□ 0.91
CTDNEP1-208ENST00000573600 OR11H2Q8NH07 326 aa20.74■□□□□ 0.91
CTDNEP1-208ENST00000573600 TRBV7-3A0A075B6L6 115 aa20.73■□□□□ 0.91
CTDNEP1-208ENST00000573600 IGIPA6NJ69 53 aa20.73■□□□□ 0.91
CTDNEP1-208ENST00000573600 RPL39P62891 51 aaKnown RBP20.73■□□□□ 0.91
CTDNEP1-208ENST00000573600 RPL36AP83881 106 aaKnown RBP20.73■□□□□ 0.91
CTDNEP1-208ENST00000573600 RPL36ALQ969Q0 106 aaKnown RBP20.73■□□□□ 0.91
CTDNEP1-208ENST00000573600 A8MZ25 164 aa20.73■□□□□ 0.91
CTDNEP1-208ENST00000573600 SLC25A29Q8N8R3 303 aa20.73■□□□□ 0.91
CTDNEP1-208ENST00000573600 BAALCQ8WXS3 180 aa20.73■□□□□ 0.91
CTDNEP1-208ENST00000573600 UQCR10Q9UDW1 63 aa20.73■□□□□ 0.91
CTDNEP1-208ENST00000573600 TRBV6-4A0A1B0GX49 114 aa20.72■□□□□ 0.91
CTDNEP1-208ENST00000573600 LYRM9A8MSI8 78 aa20.71■□□□□ 0.91
CTDNEP1-208ENST00000573600 IGKCP01834 107 aa20.71■□□□□ 0.91
CTDNEP1-208ENST00000573600 ZNRF2Q8NHG8 242 aa20.71■□□□□ 0.91
CTDNEP1-208ENST00000573600 RNF183Q96D59 192 aa20.71■□□□□ 0.91
CTDNEP1-208ENST00000573600 TRGV4A0A0C4DH28 118 aa20.7■□□□□ 0.9
CTDNEP1-208ENST00000573600 DPM2O94777 84 aa20.7■□□□□ 0.9
CTDNEP1-208ENST00000573600 MIFP14174 115 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms