RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 GAGE4Q13068 117 aa9.32□□□□□ -0.92
RPAIN-213ENST00000573577 GAGE5Q13069 117 aa9.32□□□□□ -0.92
RPAIN-213ENST00000573577 RIGQ13278 110 aa9.32□□□□□ -0.92
RPAIN-213ENST00000573577 GAGE13Q4V321 117 aa9.32□□□□□ -0.92
RPAIN-213ENST00000573577 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.32□□□□□ -0.92
RPAIN-213ENST00000573577 NUP35Q8NFH5 326 aa9.32□□□□□ -0.92
RPAIN-213ENST00000573577 ATP6V0E2Q8NHE4 81 aa9.32□□□□□ -0.92
RPAIN-213ENST00000573577 ANAPC16Q96DE5 110 aa9.32□□□□□ -0.92
RPAIN-213ENST00000573577 SEC11CQ9BY50 192 aa9.32□□□□□ -0.92
RPAIN-213ENST00000573577 DNAH17Q9UFH2 4485 aa9.31□□□□□ -0.92
RPAIN-213ENST00000573577 TRBV7-3A0A075B6L6 115 aa9.31□□□□□ -0.92
RPAIN-213ENST00000573577 LINC00336Q6ZUF6 198 aa9.31□□□□□ -0.92
RPAIN-213ENST00000573577 GTSF1LQ9H1H1 148 aa9.31□□□□□ -0.92
RPAIN-213ENST00000573577 Q9H8V8 135 aa9.31□□□□□ -0.92
RPAIN-213ENST00000573577 NBDYA0A0U1RRE5 68 aa9.3□□□□□ -0.92
RPAIN-213ENST00000573577 LINC00694P0DN24 101 aa9.3□□□□□ -0.92
RPAIN-213ENST00000573577 LINC00315P59091 139 aa9.3□□□□□ -0.92
RPAIN-213ENST00000573577 TRAV8-6A0A0B4J262 113 aa9.29□□□□□ -0.92
RPAIN-213ENST00000573577 A0A1B0GW15 77 aa9.29□□□□□ -0.92
RPAIN-213ENST00000573577 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
RPAIN-213ENST00000573577 RTL8CO15255 209 aa9.29□□□□□ -0.92
RPAIN-213ENST00000573577 SIVA1O15304 175 aa9.29□□□□□ -0.92
RPAIN-213ENST00000573577 ADCYAP1P18509 176 aa9.29□□□□□ -0.92
RPAIN-213ENST00000573577 TTC32Q5I0X7 151 aa9.29□□□□□ -0.92
RPAIN-213ENST00000573577 SUMO4Q6EEV6 95 aa9.29□□□□□ -0.92
RPAIN-213ENST00000573577 NEXN-AS1Q8NBZ9 246 aa9.29□□□□□ -0.92
RPAIN-213ENST00000573577 FAT2Q9NYQ8 4349 aa9.29□□□□□ -0.92
RPAIN-213ENST00000573577 A0A087WWC5 75 aa9.28□□□□□ -0.92
RPAIN-213ENST00000573577 M0QY20 66 aa9.28□□□□□ -0.92
RPAIN-213ENST00000573577 LELP1Q5T871 98 aa9.28□□□□□ -0.92
RPAIN-213ENST00000573577 DNAJC30Q96LL9 226 aa9.28□□□□□ -0.92
RPAIN-213ENST00000573577 TMEM191AQ9H0A3 160 aa9.28□□□□□ -0.92
RPAIN-213ENST00000573577 Q9UF83 564 aa9.28□□□□□ -0.92
RPAIN-213ENST00000573577 TNFRSF18Q9Y5U5 241 aa9.28□□□□□ -0.92
RPAIN-213ENST00000573577 HECTD4Q9Y4D8 3996 aa9.28□□□□□ -0.92
RPAIN-213ENST00000573577 S100A8P05109 93 aa9.27□□□□□ -0.93
RPAIN-213ENST00000573577 UBE2D3P61077 147 aa9.27□□□□□ -0.93
RPAIN-213ENST00000573577 UBE2D2P62837 147 aa9.27□□□□□ -0.93
RPAIN-213ENST00000573577 OR10J3Q5JRS4 329 aa9.27□□□□□ -0.93
RPAIN-213ENST00000573577 C1orf134Q5TEV5 83 aa9.27□□□□□ -0.93
RPAIN-213ENST00000573577 RASL11AQ6T310 242 aa9.27□□□□□ -0.93
RPAIN-213ENST00000573577 FRZBQ92765 325 aa9.27□□□□□ -0.93
RPAIN-213ENST00000573577 K7EP13 123 aa9.26□□□□□ -0.93
RPAIN-213ENST00000573577 DAZ4Q86SG3 579 aaKnown RBP9.26□□□□□ -0.93
RPAIN-213ENST00000573577 CTDSP1Q9GZU7 261 aa9.26□□□□□ -0.93
RPAIN-213ENST00000573577 NIT2Q9NQR4 276 aa9.26□□□□□ -0.93
RPAIN-213ENST00000573577 DAZ3Q9NR90 486 aaKnown RBP9.26□□□□□ -0.93
RPAIN-213ENST00000573577 TRAV9-2A0A087WT02 112 aa9.25□□□□□ -0.93
RPAIN-213ENST00000573577 PRSS29PA6NIE9 313 aa9.25□□□□□ -0.93
RPAIN-213ENST00000573577 HBBP68871 147 aa9.25□□□□□ -0.93
RPAIN-213ENST00000573577 NDUFA5Q16718 116 aa9.25□□□□□ -0.93
RPAIN-213ENST00000573577 TMEM97Q5BJF2 176 aa9.25□□□□□ -0.93
RPAIN-213ENST00000573577 C10orf91Q5T1B1 145 aa9.25□□□□□ -0.93
RPAIN-213ENST00000573577 ATP5L2Q7Z4Y8 100 aa9.25□□□□□ -0.93
RPAIN-213ENST00000573577 CARHSP1Q9Y2V2 147 aaKnown RBP9.25□□□□□ -0.93
RPAIN-213ENST00000573577 IGHV3-38A0A0C4DH36 116 aa9.24□□□□□ -0.93
RPAIN-213ENST00000573577 CAMPP49913 170 aa9.24□□□□□ -0.93
RPAIN-213ENST00000573577 MRPL54Q6P161 138 aaKnown RBP9.24□□□□□ -0.93
RPAIN-213ENST00000573577 WFDC10BQ8IUB3 73 aa9.24□□□□□ -0.93
RPAIN-213ENST00000573577 C6orf223Q8N319 242 aa9.24□□□□□ -0.93
RPAIN-213ENST00000573577 IMMP2LQ96T52 175 aa9.24□□□□□ -0.93
RPAIN-213ENST00000573577 KRTAP1-5Q9BYS1 174 aa9.24□□□□□ -0.93
RPAIN-213ENST00000573577 TRAV26-2A0A0B4J265 109 aa9.23□□□□□ -0.93
RPAIN-213ENST00000573577 DNAH10OSP0CZ25 163 aa9.23□□□□□ -0.93
RPAIN-213ENST00000573577 BTF3P20290 206 aaKnown RBP9.23□□□□□ -0.93
RPAIN-213ENST00000573577 KCNIP4Q6PIL6 250 aa9.23□□□□□ -0.93
RPAIN-213ENST00000573577 C10orf126Q8N4M7 172 aa9.23□□□□□ -0.93
RPAIN-213ENST00000573577 GATD1Q8NB37 220 aa9.23□□□□□ -0.93
RPAIN-213ENST00000573577 MRAP2Q96G30 205 aa9.23□□□□□ -0.93
RPAIN-213ENST00000573577 A0A1B0GVY2 172 aa9.22□□□□□ -0.93
RPAIN-213ENST00000573577 PPP1R17O96001 155 aa9.22□□□□□ -0.93
RPAIN-213ENST00000573577 RAB4AP20338 218 aa9.22□□□□□ -0.93
RPAIN-213ENST00000573577 RHEBQ15382 184 aa9.22□□□□□ -0.93
RPAIN-213ENST00000573577 LINC01556Q5JQF7 62 aa9.22□□□□□ -0.93
RPAIN-213ENST00000573577 AMN1Q8IY45 258 aa9.22□□□□□ -0.93
RPAIN-213ENST00000573577 BTF3L4Q96K17 158 aa9.22□□□□□ -0.93
RPAIN-213ENST00000573577 TMEM242Q9NWH2 141 aa9.22□□□□□ -0.93
RPAIN-213ENST00000573577 TRBV6-8A0A0A6YYG3 113 aa9.21□□□□□ -0.94
RPAIN-213ENST00000573577 A0A1B0GXF2 115 aa9.21□□□□□ -0.94
RPAIN-213ENST00000573577 FAM104BQ5XKR9 115 aa9.21□□□□□ -0.94
RPAIN-213ENST00000573577 RNF185Q96GF1 192 aa9.21□□□□□ -0.94
RPAIN-213ENST00000573577 TMA7Q9Y2S6 64 aaKnown RBP9.21□□□□□ -0.94
RPAIN-213ENST00000573577 URGCP-MRPS24S4R325 110 aa9.21□□□□□ -0.94
RPAIN-213ENST00000573577 TRAV9-1A0A075B6T8 112 aa9.2□□□□□ -0.94
RPAIN-213ENST00000573577 APOC3P02656 99 aa9.2□□□□□ -0.94
RPAIN-213ENST00000573577 S100PP25815 95 aa9.2□□□□□ -0.94
RPAIN-213ENST00000573577 PKIAP61925 76 aa9.2□□□□□ -0.94
RPAIN-213ENST00000573577 SVBPQ8N300 66 aa9.2□□□□□ -0.94
RPAIN-213ENST00000573577 CLRN3Q8NCR9 226 aa9.2□□□□□ -0.94
RPAIN-213ENST00000573577 DNAH11Q96DT5 4516 aa9.2□□□□□ -0.94
RPAIN-213ENST00000573577 TRBV25-1A0A075B6N4 114 aa9.19□□□□□ -0.94
RPAIN-213ENST00000573577 C7orf77A4D0Y5 90 aa9.19□□□□□ -0.94
RPAIN-213ENST00000573577 SNAPINO95295 136 aa9.19□□□□□ -0.94
RPAIN-213ENST00000573577 COTL1Q14019 142 aa9.19□□□□□ -0.94
RPAIN-213ENST00000573577 RPL39LQ96EH5 51 aaKnown RBP9.19□□□□□ -0.94
RPAIN-213ENST00000573577 CHCHD7Q9BUK0 85 aa9.19□□□□□ -0.94
RPAIN-213ENST00000573577 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
RPAIN-213ENST00000573577 RPS10P5Q9NQ39 176 aa9.19□□□□□ -0.94
RPAIN-213ENST00000573577 IGHV1-24A0A0C4DH33 117 aa9.18□□□□□ -0.94
RPAIN-213ENST00000573577 TRBV6-5A0A0K0K1A5 114 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms