RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 UBE2D2P62837 147 aa8.47□□□□□ -1.05
NPLOC4-213ENST00000573519 NUDT10Q8NFP7 164 aa8.47□□□□□ -1.05
NPLOC4-213ENST00000573519 NUDT11Q96G61 164 aa8.47□□□□□ -1.05
NPLOC4-213ENST00000573519 RNASE7Q9H1E1 156 aaKnown RBP8.47□□□□□ -1.05
NPLOC4-213ENST00000573519 A0A087WX48 190 aa8.46□□□□□ -1.06
NPLOC4-213ENST00000573519 LECT2O14960 151 aa8.46□□□□□ -1.06
NPLOC4-213ENST00000573519 NIT1Q86X76 327 aa8.46□□□□□ -1.06
NPLOC4-213ENST00000573519 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.06
NPLOC4-213ENST00000573519 EIF5A2Q9GZV4 153 aaKnown RBP8.46□□□□□ -1.06
NPLOC4-213ENST00000573519 BIN3Q9NQY0 253 aa8.46□□□□□ -1.06
NPLOC4-213ENST00000573519 KLK12Q9UKR0 248 aa8.46□□□□□ -1.06
NPLOC4-213ENST00000573519 XKRY2A2RUG3 117 aa8.45□□□□□ -1.06
NPLOC4-213ENST00000573519 TMEM262E9PQX1 116 aa8.45□□□□□ -1.06
NPLOC4-213ENST00000573519 TMEM250H0YL14 139 aa8.45□□□□□ -1.06
NPLOC4-213ENST00000573519 XGP55808 180 aa8.45□□□□□ -1.06
NPLOC4-213ENST00000573519 LYZL1Q6UWQ5 148 aa8.45□□□□□ -1.06
NPLOC4-213ENST00000573519 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-213ENST00000573519 NEXN-AS1Q8NBZ9 246 aa8.45□□□□□ -1.06
NPLOC4-213ENST00000573519 AP1S3Q96PC3 154 aa8.45□□□□□ -1.06
NPLOC4-213ENST00000573519 KIF25-AS1Q9Y6Z4 181 aa8.45□□□□□ -1.06
NPLOC4-213ENST00000573519 IGKV2D-24A0A075B6R9 120 aa8.44□□□□□ -1.06
NPLOC4-213ENST00000573519 EPM2AB3EWF7 344 aa8.44□□□□□ -1.06
NPLOC4-213ENST00000573519 MGPP08493 103 aa8.44□□□□□ -1.06
NPLOC4-213ENST00000573519 HAMPP81172 84 aa8.44□□□□□ -1.06
NPLOC4-213ENST00000573519 OR10G8Q8NGN5 311 aa8.44□□□□□ -1.06
NPLOC4-213ENST00000573519 RMI2Q96E14 147 aa8.44□□□□□ -1.06
NPLOC4-213ENST00000573519 FAM210AQ96ND0 272 aa8.44□□□□□ -1.06
NPLOC4-213ENST00000573519 RPP21Q9H633 154 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-213ENST00000573519 TRBV6-8A0A0A6YYG3 113 aa8.43□□□□□ -1.06
NPLOC4-213ENST00000573519 CACNG7P62955 275 aa8.43□□□□□ -1.06
NPLOC4-213ENST00000573519 WFDC2Q14508 124 aa8.43□□□□□ -1.06
NPLOC4-213ENST00000573519 ELOBQ15370 118 aa8.43□□□□□ -1.06
NPLOC4-213ENST00000573519 BAALCQ8WXS3 180 aa8.43□□□□□ -1.06
NPLOC4-213ENST00000573519 UBE2WQ96B02 151 aa8.43□□□□□ -1.06
NPLOC4-213ENST00000573519 DNAJC30Q96LL9 226 aa8.43□□□□□ -1.06
NPLOC4-213ENST00000573519 COX11Q9Y6N1 276 aa8.43□□□□□ -1.06
NPLOC4-213ENST00000573519 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-213ENST00000573519 F2Z2F3 143 aa8.42□□□□□ -1.06
NPLOC4-213ENST00000573519 SMR3BP02814 79 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-213ENST00000573519 SRP19P09132 144 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-213ENST00000573519 CHCHD5Q9BSY4 110 aa8.42□□□□□ -1.06
NPLOC4-213ENST00000573519 CHCHD7Q9BUK0 85 aa8.42□□□□□ -1.06
NPLOC4-213ENST00000573519 GATCO43716 136 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-213ENST00000573519 NTF3P20783 257 aa8.41□□□□□ -1.06
NPLOC4-213ENST00000573519 TEX261Q6UWH6 196 aa8.41□□□□□ -1.06
NPLOC4-213ENST00000573519 C15orf54Q8N8G6 183 aa8.41□□□□□ -1.06
NPLOC4-213ENST00000573519 FRZBQ92765 325 aa8.41□□□□□ -1.06
NPLOC4-213ENST00000573519 SMIM7Q9BQ49 75 aa8.41□□□□□ -1.06
NPLOC4-213ENST00000573519 ZNF727A8MUV8 499 aa8.4□□□□□ -1.06
NPLOC4-213ENST00000573519 CRPP02741 224 aa8.4□□□□□ -1.06
NPLOC4-213ENST00000573519 CTRLP40313 264 aa8.4□□□□□ -1.06
NPLOC4-213ENST00000573519 TWIST1Q15672 202 aa8.4□□□□□ -1.06
NPLOC4-213ENST00000573519 MPV17L2Q567V2 206 aa8.4□□□□□ -1.06
NPLOC4-213ENST00000573519 Q5VSD8 79 aa8.4□□□□□ -1.06
NPLOC4-213ENST00000573519 SUMO4Q6EEV6 95 aa8.4□□□□□ -1.06
NPLOC4-213ENST00000573519 GTSF1Q8WW33 167 aa8.4□□□□□ -1.06
NPLOC4-213ENST00000573519 C9JQL5 133 aa8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 H7C1H1 209 aa8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 M0QY20 66 aa8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 ANGP03950 147 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 TRGC1P0CF51 173 aa8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 SRSF3P84103 164 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 Q0VG73 95 aa8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 TMEM97Q5BJF2 176 aa8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 WDR73Q6P4I2 378 aa8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 FAM231DQ6ZW35 169 aa8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 LINC01551Q86U37 167 aa8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 TMEM70Q9BUB7 260 aa8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 C1orf43Q9BWL3 253 aa8.39□□□□□ -1.07
NPLOC4-213ENST00000573519 FOXA3P55318 350 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-213ENST00000573519 GAGE6Q13070 117 aa8.38□□□□□ -1.07
NPLOC4-213ENST00000573519 Q8N976 141 aa8.38□□□□□ -1.07
NPLOC4-213ENST00000573519 PGLYRP4Q96LB8 373 aa8.38□□□□□ -1.07
NPLOC4-213ENST00000573519 CNFNQ9BYD5 112 aa8.38□□□□□ -1.07
NPLOC4-213ENST00000573519 DPH3P1Q9H4G8 78 aa8.38□□□□□ -1.07
NPLOC4-213ENST00000573519 TRBV25-1A0A075B6N4 114 aa8.37□□□□□ -1.07
NPLOC4-213ENST00000573519 NDUFS6O75380 124 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-213ENST00000573519 PKIAP61925 76 aa8.37□□□□□ -1.07
NPLOC4-213ENST00000573519 ATRAIDQ6UW56 229 aa8.37□□□□□ -1.07
NPLOC4-213ENST00000573519 ENHOQ6UWT2 76 aa8.37□□□□□ -1.07
NPLOC4-213ENST00000573519 NTM-AS1Q6ZSK4 140 aa8.37□□□□□ -1.07
NPLOC4-213ENST00000573519 DEFB104AQ8WTQ1 72 aa8.37□□□□□ -1.07
NPLOC4-213ENST00000573519 FAM30AQ9NZY2 134 aa8.37□□□□□ -1.07
NPLOC4-213ENST00000573519 TRAV26-2A0A0B4J265 109 aa8.36□□□□□ -1.07
NPLOC4-213ENST00000573519 A8MWL6 223 aa8.36□□□□□ -1.07
NPLOC4-213ENST00000573519 FAM229AH3BQW9 127 aa8.36□□□□□ -1.07
NPLOC4-213ENST00000573519 INAFM2P0DMQ5 153 aa8.36□□□□□ -1.07
NPLOC4-213ENST00000573519 LINC01620Q4KN68 170 aa8.36□□□□□ -1.07
NPLOC4-213ENST00000573519 RASL11AQ6T310 242 aa8.36□□□□□ -1.07
NPLOC4-213ENST00000573519 CLPSL2Q6UWE3 100 aa8.36□□□□□ -1.07
NPLOC4-213ENST00000573519 IGHV1-24A0A0C4DH33 117 aa8.35□□□□□ -1.07
NPLOC4-213ENST00000573519 HLA-DQA1P01909 254 aa8.35□□□□□ -1.07
NPLOC4-213ENST00000573519 PEA15Q15121 130 aa8.35□□□□□ -1.07
NPLOC4-213ENST00000573519 TMEM241Q24JQ0 296 aa8.35□□□□□ -1.07
NPLOC4-213ENST00000573519 CT83Q5H943 113 aa8.35□□□□□ -1.07
NPLOC4-213ENST00000573519 RPL23P62829 140 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-213ENST00000573519 RBX1P62877 108 aa8.34□□□□□ -1.07
NPLOC4-213ENST00000573519 GATD1Q8NB37 220 aa8.34□□□□□ -1.07
NPLOC4-213ENST00000573519 TSKUQ8WUA8 353 aa8.34□□□□□ -1.07
NPLOC4-213ENST00000573519 NIT2Q9NQR4 276 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms