RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 OVOL2Q9BRP0 275 aa14.01□□□□□ -0.17
RPAIN-210ENST00000571613 VAMP8Q9BV40 100 aa14.01□□□□□ -0.17
RPAIN-210ENST00000571613 OR4C5Q8NGB2 326 aa14.01□□□□□ -0.17
RPAIN-210ENST00000571613 NOTCH3Q9UM47 2321 aa14□□□□□ -0.17
RPAIN-210ENST00000571613 IGHV3-53P01767 116 aa14□□□□□ -0.17
RPAIN-210ENST00000571613 DNAJC30Q96LL9 226 aa14□□□□□ -0.17
RPAIN-210ENST00000571613 TRAV4A0A0B4J268 109 aa13.99□□□□□ -0.17
RPAIN-210ENST00000571613 ZNF664Q8N3J9 261 aa13.99□□□□□ -0.17
RPAIN-210ENST00000571613 NOP10Q9NPE3 64 aaKnown RBP13.99□□□□□ -0.17
RPAIN-210ENST00000571613 LINC01545Q5VT33 79 aa13.98□□□□□ -0.17
RPAIN-210ENST00000571613 LGALS9CQ6DKI2 356 aa13.98□□□□□ -0.17
RPAIN-210ENST00000571613 TNFRSF18Q9Y5U5 241 aa13.98□□□□□ -0.17
RPAIN-210ENST00000571613 IGHV3-73A0A0B4J1V6 119 aa13.97□□□□□ -0.17
RPAIN-210ENST00000571613 PLAC8L1A1L4L8 177 aa13.97□□□□□ -0.17
RPAIN-210ENST00000571613 I3L3M4 83 aa13.97□□□□□ -0.17
RPAIN-210ENST00000571613 RHOHQ15669 191 aa13.97□□□□□ -0.17
RPAIN-210ENST00000571613 TOMM6Q96B49 74 aa13.97□□□□□ -0.17
RPAIN-210ENST00000571613 TENM1Q9UKZ4 2725 aa13.96□□□□□ -0.17
RPAIN-210ENST00000571613 Q6ZTI0 123 aa13.96□□□□□ -0.17
RPAIN-210ENST00000571613 EGFEM1PQ0D2K5 195 aa13.95□□□□□ -0.18
RPAIN-210ENST00000571613 TRAV9-2A0A087WT02 112 aa13.95□□□□□ -0.18
RPAIN-210ENST00000571613 C18orf15Q96N68 181 aa13.95□□□□□ -0.18
RPAIN-210ENST00000571613 CYSLTR1Q9Y271 337 aa13.95□□□□□ -0.18
RPAIN-210ENST00000571613 TRBV10-1A0A0K0K1A3 114 aa13.94□□□□□ -0.18
RPAIN-210ENST00000571613 H0Y8G0 127 aa13.94□□□□□ -0.18
RPAIN-210ENST00000571613 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.94□□□□□ -0.18
RPAIN-210ENST00000571613 RIPPLY3P57055 190 aa13.94□□□□□ -0.18
RPAIN-210ENST00000571613 C2orf66Q6UXQ4 117 aa13.94□□□□□ -0.18
RPAIN-210ENST00000571613 PAM16Q9Y3D7 125 aa13.94□□□□□ -0.18
RPAIN-210ENST00000571613 TRGV2A0A075B6R0 118 aa13.93□□□□□ -0.18
RPAIN-210ENST00000571613 HSBP1L1C9JCN9 74 aa13.93□□□□□ -0.18
RPAIN-210ENST00000571613 PRSS1P07477 247 aa13.93□□□□□ -0.18
RPAIN-210ENST00000571613 OXLD1Q5BKU9 147 aa13.93□□□□□ -0.18
RPAIN-210ENST00000571613 SCGB3A1Q96QR1 104 aa13.93□□□□□ -0.18
RPAIN-210ENST00000571613 IGHV4-30-4P0DP06 118 aa13.92□□□□□ -0.18
RPAIN-210ENST00000571613 PRO1933Q9H354 126 aa13.92□□□□□ -0.18
RPAIN-210ENST00000571613 X6R8D5 127 aa13.92□□□□□ -0.18
RPAIN-210ENST00000571613 SPATA45Q537H7 98 aa13.91□□□□□ -0.18
RPAIN-210ENST00000571613 Q6ZN92 141 aa13.91□□□□□ -0.18
RPAIN-210ENST00000571613 NEGR1Q7Z3B1 354 aa13.91□□□□□ -0.18
RPAIN-210ENST00000571613 ERASQ7Z444 233 aa13.91□□□□□ -0.18
RPAIN-210ENST00000571613 GAGE12BA1L429 117 aa13.91□□□□□ -0.18
RPAIN-210ENST00000571613 A8MZ25 164 aa13.91□□□□□ -0.18
RPAIN-210ENST00000571613 GAGE7O76087 117 aa13.91□□□□□ -0.18
RPAIN-210ENST00000571613 GAGE12FP0CL80 117 aa13.91□□□□□ -0.18
RPAIN-210ENST00000571613 GAGE12GP0CL81 117 aa13.91□□□□□ -0.18
RPAIN-210ENST00000571613 GAGE12IP0CL82 117 aa13.91□□□□□ -0.18
RPAIN-210ENST00000571613 NEXN-AS1Q8NBZ9 246 aa13.91□□□□□ -0.18
RPAIN-210ENST00000571613 ZNF479Q96JC4 524 aa13.91□□□□□ -0.18
RPAIN-210ENST00000571613 Q6ZSN1 163 aa13.9□□□□□ -0.18
RPAIN-210ENST00000571613 ATOH7Q8N100 152 aa13.9□□□□□ -0.18
RPAIN-210ENST00000571613 K7EQD1 137 aa13.89□□□□□ -0.19
RPAIN-210ENST00000571613 TMEM141Q96I45 108 aa13.89□□□□□ -0.19
RPAIN-210ENST00000571613 NACAE9PAV3 2078 aa13.89□□□□□ -0.19
RPAIN-210ENST00000571613 TRAV12-1A0A0B4J245 112 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 LYRM9A8MSI8 78 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 TSHBP01222 138 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 RPL36AP83881 106 aaKnown RBP13.88□□□□□ -0.19
RPAIN-210ENST00000571613 DEFB135Q30KP9 77 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 LINC00612Q8N6U2 182 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 RPL36ALQ969Q0 106 aaKnown RBP13.88□□□□□ -0.19
RPAIN-210ENST00000571613 ZMAT4Q9H898 229 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 P0DMU3 169 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 FAM231AP0DMU4 169 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 FAM231CP0DMU5 169 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 MIFP14174 115 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 DDTP30046 118 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 OR11H2Q8NH07 326 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 TIMM17AQ99595 171 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 TP53TG1Q9Y2A0 90 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 VWFP04275 2813 aa13.88□□□□□ -0.19
RPAIN-210ENST00000571613 TRBV7-3A0A075B6L6 115 aa13.87□□□□□ -0.19
RPAIN-210ENST00000571613 TRBV6-4A0A1B0GX49 114 aa13.87□□□□□ -0.19
RPAIN-210ENST00000571613 RNF183Q96D59 192 aa13.87□□□□□ -0.19
RPAIN-210ENST00000571613 EMP1P54849 157 aa13.86□□□□□ -0.19
RPAIN-210ENST00000571613 KRTAP10-11P60412 298 aa13.86□□□□□ -0.19
RPAIN-210ENST00000571613 ODF1Q14990 250 aa13.86□□□□□ -0.19
RPAIN-210ENST00000571613 A0A087WX48 190 aa13.85□□□□□ -0.19
RPAIN-210ENST00000571613 C20orf203Q8NBC4 194 aa13.85□□□□□ -0.19
RPAIN-210ENST00000571613 TRGV4A0A0C4DH28 118 aa13.85□□□□□ -0.19
RPAIN-210ENST00000571613 COTL1Q14019 142 aa13.85□□□□□ -0.19
RPAIN-210ENST00000571613 DAZ4Q86SG3 579 aaKnown RBP13.85□□□□□ -0.19
RPAIN-210ENST00000571613 PMCHL2Q9BQD1 86 aa13.85□□□□□ -0.19
RPAIN-210ENST00000571613 MIEN1Q9BRT3 115 aa13.85□□□□□ -0.19
RPAIN-210ENST00000571613 DAZ3Q9NR90 486 aaKnown RBP13.85□□□□□ -0.19
RPAIN-210ENST00000571613 TRRAPQ9Y4A5 3859 aa13.84□□□□□ -0.19
RPAIN-210ENST00000571613 SLC25A29Q8N8R3 303 aa13.84□□□□□ -0.19
RPAIN-210ENST00000571613 IGIPA6NJ69 53 aa13.83□□□□□ -0.2
RPAIN-210ENST00000571613 DPM2O94777 84 aa13.83□□□□□ -0.2
RPAIN-210ENST00000571613 NPSP0C0P6 89 aa13.83□□□□□ -0.2
RPAIN-210ENST00000571613 PAPPA-AS1Q5QFB9 102 aa13.83□□□□□ -0.2
RPAIN-210ENST00000571613 ZNRF2Q8NHG8 242 aa13.83□□□□□ -0.2
RPAIN-210ENST00000571613 PRADC1Q9BSG0 188 aa13.83□□□□□ -0.2
RPAIN-210ENST00000571613 UQCR10Q9UDW1 63 aa13.83□□□□□ -0.2
RPAIN-210ENST00000571613 FBN1P35555 2871 aaKnown RBP13.82□□□□□ -0.2
RPAIN-210ENST00000571613 IGKCP01834 107 aa13.82□□□□□ -0.2
RPAIN-210ENST00000571613 IGLC3P0DOY3 106 aa13.82□□□□□ -0.2
RPAIN-210ENST00000571613 PLNP26678 52 aa13.82□□□□□ -0.2
RPAIN-210ENST00000571613 BAALCQ8WXS3 180 aa13.82□□□□□ -0.2
RPAIN-210ENST00000571613 DKK2Q9UBU2 259 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms