RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 RPL35P42766 123 aaKnown RBP6.46□□□□□ -1.38
CIITA-207ENST00000571545 ATRAIDQ6UW56 229 aa6.46□□□□□ -1.38
CIITA-207ENST00000571545 OR10AG1Q8NH19 301 aa6.46□□□□□ -1.38
CIITA-207ENST00000571545 C1orf43Q9BWL3 253 aa6.46□□□□□ -1.38
CIITA-207ENST00000571545 LRP1BQ9NZR2 4599 aa6.46□□□□□ -1.38
CIITA-207ENST00000571545 GNG13Q9P2W3 67 aa6.46□□□□□ -1.38
CIITA-207ENST00000571545 KLK12Q9UKR0 248 aa6.46□□□□□ -1.38
CIITA-207ENST00000571545 F5H697 171 aa6.45□□□□□ -1.38
CIITA-207ENST00000571545 PLA2G1BP04054 148 aaKnown RBP6.45□□□□□ -1.38
CIITA-207ENST00000571545 CACNG7P62955 275 aa6.45□□□□□ -1.38
CIITA-207ENST00000571545 Q6ZSA8 131 aa6.45□□□□□ -1.38
CIITA-207ENST00000571545 UBE2WQ96B02 151 aa6.45□□□□□ -1.38
CIITA-207ENST00000571545 TRBV25-1A0A075B6N4 114 aa6.44□□□□□ -1.38
CIITA-207ENST00000571545 TMEM262E9PQX1 116 aa6.44□□□□□ -1.38
CIITA-207ENST00000571545 F2Z2F3 143 aa6.44□□□□□ -1.38
CIITA-207ENST00000571545 GNG4P50150 75 aa6.44□□□□□ -1.38
CIITA-207ENST00000571545 CCL20P78556 96 aa6.44□□□□□ -1.38
CIITA-207ENST00000571545 RPL19P84098 196 aaKnown RBP6.44□□□□□ -1.38
CIITA-207ENST00000571545 MEF2BQ02080 365 aaPredicted RBP6.44□□□□□ -1.38
CIITA-207ENST00000571545 CENPWQ5EE01 88 aa6.44□□□□□ -1.38
CIITA-207ENST00000571545 FER1L6-AS1Q8NA97 138 aa6.44□□□□□ -1.38
CIITA-207ENST00000571545 NEXN-AS1Q8NBZ9 246 aa6.44□□□□□ -1.38
CIITA-207ENST00000571545 CHCHD5Q9BSY4 110 aa6.44□□□□□ -1.38
CIITA-207ENST00000571545 Q9UF83 564 aa6.44□□□□□ -1.38
CIITA-207ENST00000571545 VAX2Q9UIW0 290 aa6.44□□□□□ -1.38
CIITA-207ENST00000571545 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.43□□□□□ -1.38
CIITA-207ENST00000571545 LECT2O14960 151 aa6.43□□□□□ -1.38
CIITA-207ENST00000571545 P01737 135 aa6.43□□□□□ -1.38
CIITA-207ENST00000571545 SMR3BP02814 79 aaPredicted RBP6.43□□□□□ -1.38
CIITA-207ENST00000571545 ANGP03950 147 aaKnown RBP6.43□□□□□ -1.38
CIITA-207ENST00000571545 TRGC1P0CF51 173 aa6.43□□□□□ -1.38
CIITA-207ENST00000571545 SULT1A2P50226 295 aa6.43□□□□□ -1.38
CIITA-207ENST00000571545 MIAQ16674 131 aa6.43□□□□□ -1.38
CIITA-207ENST00000571545 BAALCQ8WXS3 180 aa6.43□□□□□ -1.38
CIITA-207ENST00000571545 DNAJC30Q96LL9 226 aa6.43□□□□□ -1.38
CIITA-207ENST00000571545 DMBT1Q9UGM3 2413 aaPredicted RBP6.42□□□□□ -1.38
CIITA-207ENST00000571545 DNAH5Q8TE73 4624 aa6.42□□□□□ -1.38
CIITA-207ENST00000571545 WFDC2Q14508 124 aa6.42□□□□□ -1.38
CIITA-207ENST00000571545 SLC51BQ86UW2 128 aa6.42□□□□□ -1.38
CIITA-207ENST00000571545 TCTE3Q8IZS6 198 aa6.42□□□□□ -1.38
CIITA-207ENST00000571545 C15orf54Q8N8G6 183 aa6.42□□□□□ -1.38
CIITA-207ENST00000571545 OR2D3Q8NGH3 330 aa6.42□□□□□ -1.38
CIITA-207ENST00000571545 TPPP3Q9BW30 176 aa6.42□□□□□ -1.38
CIITA-207ENST00000571545 IGHV1-24A0A0C4DH33 117 aa6.41□□□□□ -1.38
CIITA-207ENST00000571545 MGPP08493 103 aa6.41□□□□□ -1.38
CIITA-207ENST00000571545 IGLC6P0CF74 106 aa6.41□□□□□ -1.38
CIITA-207ENST00000571545 BCL2P10415 239 aa6.41□□□□□ -1.38
CIITA-207ENST00000571545 MPV17L2Q567V2 206 aa6.41□□□□□ -1.38
CIITA-207ENST00000571545 DERL1Q9BUN8 251 aa6.41□□□□□ -1.38
CIITA-207ENST00000571545 MRPL18Q9H0U6 180 aaKnown RBP6.41□□□□□ -1.38
CIITA-207ENST00000571545 C19orf71A6NCJ1 209 aa6.4□□□□□ -1.38
CIITA-207ENST00000571545 IQCJQ1A5X6 159 aa6.4□□□□□ -1.38
CIITA-207ENST00000571545 WDR73Q6P4I2 378 aa6.4□□□□□ -1.38
CIITA-207ENST00000571545 DPH3P1Q9H4G8 78 aa6.4□□□□□ -1.38
CIITA-207ENST00000571545 MED9Q9NWA0 146 aa6.4□□□□□ -1.38
CIITA-207ENST00000571545 KIF25-AS1Q9Y6Z4 181 aa6.4□□□□□ -1.38
CIITA-207ENST00000571545 APOBP04114 4563 aaKnown RBP6.4□□□□□ -1.39
CIITA-207ENST00000571545 MUC21A0A0G2JKD1 596 aa6.39□□□□□ -1.39
CIITA-207ENST00000571545 MUC21A0A140T8X8 626 aa6.39□□□□□ -1.39
CIITA-207ENST00000571545 M0QY20 66 aa6.39□□□□□ -1.39
CIITA-207ENST00000571545 HLA-DQA1P01909 254 aa6.39□□□□□ -1.39
CIITA-207ENST00000571545 SSTP61278 116 aa6.39□□□□□ -1.39
CIITA-207ENST00000571545 HAMPP81172 84 aa6.39□□□□□ -1.39
CIITA-207ENST00000571545 RASL11AQ6T310 242 aa6.39□□□□□ -1.39
CIITA-207ENST00000571545 ENHOQ6UWT2 76 aa6.39□□□□□ -1.39
CIITA-207ENST00000571545 PGLYRP4Q96LB8 373 aa6.39□□□□□ -1.39
CIITA-207ENST00000571545 PRR34Q9NV39 138 aa6.39□□□□□ -1.39
CIITA-207ENST00000571545 FAM30AQ9NZY2 134 aa6.39□□□□□ -1.39
CIITA-207ENST00000571545 TRAV8-4A0A0B4J246 113 aa6.38□□□□□ -1.39
CIITA-207ENST00000571545 IGLV2-8P01709 118 aa6.38□□□□□ -1.39
CIITA-207ENST00000571545 CTRLP40313 264 aa6.38□□□□□ -1.39
CIITA-207ENST00000571545 SUMO4Q6EEV6 95 aa6.38□□□□□ -1.39
CIITA-207ENST00000571545 DGAT2L7PQ6IED9 249 aa6.38□□□□□ -1.39
CIITA-207ENST00000571545 SMIM15Q7Z3B0 74 aa6.38□□□□□ -1.39
CIITA-207ENST00000571545 CLRN3Q8NCR9 226 aa6.38□□□□□ -1.39
CIITA-207ENST00000571545 DEFB104AQ8WTQ1 72 aa6.38□□□□□ -1.39
CIITA-207ENST00000571545 TMEM243Q9BU79 118 aa6.38□□□□□ -1.39
CIITA-207ENST00000571545 CHAC1Q9BUX1 264 aa6.38□□□□□ -1.39
CIITA-207ENST00000571545 A0A1B0GUV1 79 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 USP17L23D6RBM5 183 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 UBE2L6O14933 153 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 GZMBP10144 247 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 RBX1P62877 108 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 COTL1Q14019 142 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 TEX261Q6UWH6 196 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 LYZL1Q6UWQ5 148 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 NTM-AS1Q6ZSK4 140 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 SCXQ7RTU7 201 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 C9orf62Q8N4C0 152 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 CNFNQ9BYD5 112 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 RPP21Q9H633 154 aaKnown RBP6.37□□□□□ -1.39
CIITA-207ENST00000571545 NIT2Q9NQR4 276 aa6.37□□□□□ -1.39
CIITA-207ENST00000571545 TRBV20OR9-2A0A075B6H5 130 aa6.36□□□□□ -1.39
CIITA-207ENST00000571545 RAB19A4D1S5 217 aa6.36□□□□□ -1.39
CIITA-207ENST00000571545 TMEM250H0YL14 139 aa6.36□□□□□ -1.39
CIITA-207ENST00000571545 NTF3P20783 257 aa6.36□□□□□ -1.39
CIITA-207ENST00000571545 BLOC1S1P78537 153 aa6.36□□□□□ -1.39
CIITA-207ENST00000571545 REG3AQ06141 175 aa6.36□□□□□ -1.39
CIITA-207ENST00000571545 GAGE6Q13070 117 aa6.36□□□□□ -1.39
CIITA-207ENST00000571545 LINC00269Q8N2A0 174 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms