RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 H3BNG1 76 aa8.43□□□□□ -1.06
CDRT1-206ENST00000571263 VCYO14598 125 aa8.43□□□□□ -1.06
CDRT1-206ENST00000571263 PMCHP20382 165 aa8.43□□□□□ -1.06
CDRT1-206ENST00000571263 BAGE3Q86Y29 109 aa8.43□□□□□ -1.06
CDRT1-206ENST00000571263 SLC25A29Q8N8R3 303 aa8.43□□□□□ -1.06
CDRT1-206ENST00000571263 NRACQ8N912 160 aa8.43□□□□□ -1.06
CDRT1-206ENST00000571263 PRSS3P2Q8NHM4 247 aa8.43□□□□□ -1.06
CDRT1-206ENST00000571263 C18orf32Q8TCD1 76 aa8.43□□□□□ -1.06
CDRT1-206ENST00000571263 SMKR1H3BMG3 65 aa8.42□□□□□ -1.06
CDRT1-206ENST00000571263 NCR2O95944 276 aa8.42□□□□□ -1.06
CDRT1-206ENST00000571263 NPYP01303 97 aa8.42□□□□□ -1.06
CDRT1-206ENST00000571263 S100A6P06703 90 aa8.42□□□□□ -1.06
CDRT1-206ENST00000571263 G0S2P27469 103 aa8.42□□□□□ -1.06
CDRT1-206ENST00000571263 CRYBA4P53673 196 aa8.42□□□□□ -1.06
CDRT1-206ENST00000571263 SH2D6Q7Z4S9 175 aa8.42□□□□□ -1.06
CDRT1-206ENST00000571263 TRBV7-3A0A075B6L6 115 aa8.41□□□□□ -1.06
CDRT1-206ENST00000571263 TRAV10A0A0B4J240 114 aa8.41□□□□□ -1.06
CDRT1-206ENST00000571263 F5H768 121 aa8.41□□□□□ -1.06
CDRT1-206ENST00000571263 PAX4O43316 350 aa8.41□□□□□ -1.06
CDRT1-206ENST00000571263 LINC00614P0C842 121 aa8.41□□□□□ -1.06
CDRT1-206ENST00000571263 POLR2KP53803 58 aaKnown RBP8.41□□□□□ -1.06
CDRT1-206ENST00000571263 TMEM97Q5BJF2 176 aa8.41□□□□□ -1.06
CDRT1-206ENST00000571263 COA6Q5JTJ3 125 aaKnown RBP8.41□□□□□ -1.06
CDRT1-206ENST00000571263 DAZ4Q86SG3 579 aaKnown RBP8.41□□□□□ -1.06
CDRT1-206ENST00000571263 CHCHD1Q96BP2 118 aaKnown RBP8.41□□□□□ -1.06
CDRT1-206ENST00000571263 RPL39LQ96EH5 51 aaKnown RBP8.41□□□□□ -1.06
CDRT1-206ENST00000571263 KIR2DL4Q99706 377 aa8.41□□□□□ -1.06
CDRT1-206ENST00000571263 DAZ3Q9NR90 486 aaKnown RBP8.41□□□□□ -1.06
CDRT1-206ENST00000571263 TRBV27A0A0K0K1C4 114 aa8.4□□□□□ -1.06
CDRT1-206ENST00000571263 SDHAF1A6NFY7 115 aa8.4□□□□□ -1.06
CDRT1-206ENST00000571263 LINC01549A6NIU2 74 aa8.4□□□□□ -1.06
CDRT1-206ENST00000571263 I3L3M4 83 aa8.4□□□□□ -1.06
CDRT1-206ENST00000571263 HOXA5P20719 270 aa8.4□□□□□ -1.06
CDRT1-206ENST00000571263 Q6ZSN1 163 aa8.4□□□□□ -1.06
CDRT1-206ENST00000571263 FA2HQ7L5A8 372 aa8.4□□□□□ -1.06
CDRT1-206ENST00000571263 Q8N8P6 123 aa8.4□□□□□ -1.06
CDRT1-206ENST00000571263 NEXN-AS1Q8NBZ9 246 aa8.4□□□□□ -1.06
CDRT1-206ENST00000571263 SMIM2Q9BVW6 85 aa8.4□□□□□ -1.06
CDRT1-206ENST00000571263 DEFB131BA0A096LNP1 70 aa8.39□□□□□ -1.07
CDRT1-206ENST00000571263 NDUFA6P56556 154 aa8.39□□□□□ -1.07
CDRT1-206ENST00000571263 NANOS2P60321 138 aaKnown RBP8.39□□□□□ -1.07
CDRT1-206ENST00000571263 ORMDL2Q53FV1 153 aa8.39□□□□□ -1.07
CDRT1-206ENST00000571263 Q6ZTC4 211 aa8.39□□□□□ -1.07
CDRT1-206ENST00000571263 NIT1Q86X76 327 aa8.39□□□□□ -1.07
CDRT1-206ENST00000571263 ZNRF2Q8NHG8 242 aa8.39□□□□□ -1.07
CDRT1-206ENST00000571263 TMEM70Q9BUB7 260 aa8.39□□□□□ -1.07
CDRT1-206ENST00000571263 DNAH3Q8TD57 4116 aa8.39□□□□□ -1.07
CDRT1-206ENST00000571263 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
CDRT1-206ENST00000571263 LOC389332A0A1B0GUA5 103 aa8.38□□□□□ -1.07
CDRT1-206ENST00000571263 LINC01546A6NGU7 62 aa8.38□□□□□ -1.07
CDRT1-206ENST00000571263 GAS8-AS1O95177 125 aa8.38□□□□□ -1.07
CDRT1-206ENST00000571263 HTN3P15516 51 aa8.38□□□□□ -1.07
CDRT1-206ENST00000571263 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
CDRT1-206ENST00000571263 AP5S1Q9NUS5 200 aa8.38□□□□□ -1.07
CDRT1-206ENST00000571263 HSBP1O75506 76 aa8.37□□□□□ -1.07
CDRT1-206ENST00000571263 ESDP10768 282 aa8.37□□□□□ -1.07
CDRT1-206ENST00000571263 GYPEP15421 78 aa8.37□□□□□ -1.07
CDRT1-206ENST00000571263 IFI27P40305 119 aaPredicted RBP8.37□□□□□ -1.07
CDRT1-206ENST00000571263 UBE2D3P61077 147 aa8.37□□□□□ -1.07
CDRT1-206ENST00000571263 UBE2D2P62837 147 aa8.37□□□□□ -1.07
CDRT1-206ENST00000571263 ICOSQ9Y6W8 199 aa8.37□□□□□ -1.07
CDRT1-206ENST00000571263 NOTCH1P46531 2555 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 IGLV2-18A0A075B6J9 118 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 GAGE12JA6NER3 117 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 P0DMU3 169 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 FAM231AP0DMU4 169 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 FAM231CP0DMU5 169 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 FCER1GP30273 86 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 GAGE1Q13065 139 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 GAGE4Q13068 117 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 GAGE5Q13069 117 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 COTL1Q14019 142 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 LAGE3Q14657 143 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 IQCJQ1A5X6 159 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 GAGE13Q4V321 117 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 C15orf53Q8NAA6 179 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 TMEM18Q96B42 140 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 VSIG2Q96IQ7 327 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 GTSF1LQ9H1H1 148 aa8.36□□□□□ -1.07
CDRT1-206ENST00000571263 DNHD1Q96M86 4753 aa8.35□□□□□ -1.07
CDRT1-206ENST00000571263 NBEAL1Q6ZS30 2694 aa8.35□□□□□ -1.07
CDRT1-206ENST00000571263 NACAE9PAV3 2078 aa8.35□□□□□ -1.07
CDRT1-206ENST00000571263 SERF1AO75920 110 aa8.35□□□□□ -1.07
CDRT1-206ENST00000571263 SMAGPQ0VAQ4 97 aa8.35□□□□□ -1.07
CDRT1-206ENST00000571263 RNASEKQ6P5S7 137 aaKnown RBP8.35□□□□□ -1.07
CDRT1-206ENST00000571263 ATP6V0E2Q8NHE4 81 aa8.35□□□□□ -1.07
CDRT1-206ENST00000571263 PACRGQ96M98 296 aaPredicted RBP8.35□□□□□ -1.07
CDRT1-206ENST00000571263 A0A0J9YY99 117 aa8.34□□□□□ -1.07
CDRT1-206ENST00000571263 C5orf52A6NGY3 159 aa8.34□□□□□ -1.07
CDRT1-206ENST00000571263 LINC00694P0DN24 101 aa8.34□□□□□ -1.07
CDRT1-206ENST00000571263 S100A2P29034 98 aa8.34□□□□□ -1.07
CDRT1-206ENST00000571263 NEGR1Q7Z3B1 354 aa8.34□□□□□ -1.07
CDRT1-206ENST00000571263 PHLDA1Q8WV24 401 aaPredicted RBP8.34□□□□□ -1.07
CDRT1-206ENST00000571263 TMA7Q9Y2S6 64 aaKnown RBP8.34□□□□□ -1.07
CDRT1-206ENST00000571263 TCTAP57738 103 aa8.33□□□□□ -1.08
CDRT1-206ENST00000571263 TIRAPP58753 221 aa8.33□□□□□ -1.08
CDRT1-206ENST00000571263 URB1-AS1Q96HZ7 61 aa8.33□□□□□ -1.08
CDRT1-206ENST00000571263 LOC100131303A0A0U1RQF7 123 aa8.32□□□□□ -1.08
CDRT1-206ENST00000571263 NUPR2A6NF83 97 aa8.32□□□□□ -1.08
CDRT1-206ENST00000571263 H7C423 109 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms