RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 IGHV3-38A0A0C4DH36 116 aa7.56□□□□□ -1.2
USP43-203ENST00000570827 GAGE5Q13069 117 aa7.56□□□□□ -1.2
USP43-203ENST00000570827 GAGE6Q13070 117 aa7.56□□□□□ -1.2
USP43-203ENST00000570827 SUMO4Q6EEV6 95 aa7.56□□□□□ -1.2
USP43-203ENST00000570827 TNFRSF18Q9Y5U5 241 aa7.56□□□□□ -1.2
USP43-203ENST00000570827 NIPBLQ6KC79 2804 aaeCLIP7.56□□□□□ -1.2
USP43-203ENST00000570827 MEIG1Q5JSS6 88 aa7.56□□□□□ -1.2
USP43-203ENST00000570827 CEMP1Q6PRD7 247 aaPredicted RBP7.56□□□□□ -1.2
USP43-203ENST00000570827 ZMAT4Q9H898 229 aa7.56□□□□□ -1.2
USP43-203ENST00000570827 RS1O15537 224 aa7.55□□□□□ -1.2
USP43-203ENST00000570827 CFC1BP0CG36 223 aa7.55□□□□□ -1.2
USP43-203ENST00000570827 CFC1P0CG37 223 aa7.55□□□□□ -1.2
USP43-203ENST00000570827 ZFAND3Q9H8U3 227 aa7.55□□□□□ -1.2
USP43-203ENST00000570827 C19orf84I3L1E1 186 aa7.55□□□□□ -1.2
USP43-203ENST00000570827 GATA3P23771 443 aa7.55□□□□□ -1.2
USP43-203ENST00000570827 BLCAPP62952 87 aa7.55□□□□□ -1.2
USP43-203ENST00000570827 CFAP126Q5VTH2 177 aa7.55□□□□□ -1.2
USP43-203ENST00000570827 DUX3Q96PT4 197 aa7.55□□□□□ -1.2
USP43-203ENST00000570827 IGHV3-16A0A0C4DH30 117 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 RNASE1P07998 156 aaKnown RBP7.54□□□□□ -1.2
USP43-203ENST00000570827 SPATA25Q9BR10 227 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 TRAV12-1A0A0B4J245 112 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 M0R2P5 195 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 SNRPD3P62318 126 aaKnown RBP7.54□□□□□ -1.2
USP43-203ENST00000570827 C15orf53Q8NAA6 179 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 TIMM21Q9BVV7 248 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 MOB4Q9Y3A3 225 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 A0A0J9YY99 117 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 GAGE12JA6NER3 117 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 GAGE7O76087 117 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 GAGE12FP0CL80 117 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 GAGE12GP0CL81 117 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 GAGE12IP0CL82 117 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 CRIP2P52943 208 aaPredicted RBP7.54□□□□□ -1.2
USP43-203ENST00000570827 GAGE4Q13068 117 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 ATXN8Q156A1 80 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 C9orf47Q6ZRZ4 202 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 TMEM190Q8WZ59 177 aa7.54□□□□□ -1.2
USP43-203ENST00000570827 IGLV2-18A0A075B6J9 118 aa7.53□□□□□ -1.2
USP43-203ENST00000570827 TEX49A0A1B0GTD5 131 aa7.53□□□□□ -1.2
USP43-203ENST00000570827 A0A1W2PRX2 142 aa7.53□□□□□ -1.2
USP43-203ENST00000570827 OOSP1A8MZH6 123 aa7.53□□□□□ -1.2
USP43-203ENST00000570827 UBE2E1P51965 193 aa7.53□□□□□ -1.2
USP43-203ENST00000570827 CENPVL3A0A0U1RRI6 287 aa7.53□□□□□ -1.2
USP43-203ENST00000570827 IFITM1P13164 125 aa7.53□□□□□ -1.2
USP43-203ENST00000570827 MDFICQ9P1T7 246 aa7.53□□□□□ -1.2
USP43-203ENST00000570827 ATRQ13535 2644 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 A8MZ25 164 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 BSNQ9UPA5 3926 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 GCN1Q92616 2671 aaKnown RBP7.52□□□□□ -1.21
USP43-203ENST00000570827 CLPSL1A2RUU4 121 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 H3BMM0 161 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 P0DMU3 169 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 FAM231AP0DMU4 169 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 FAM231CP0DMU5 169 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 IGHV4-38-2P0DP08 117 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 SMCPP49901 116 aaPredicted RBP7.52□□□□□ -1.21
USP43-203ENST00000570827 ZFAND2AQ8N6M9 145 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 CLEC2BQ92478 149 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 UBE2WQ96B02 151 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 CCL19Q99731 98 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 CNFNQ9BYD5 112 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 TOMM7Q9P0U1 55 aa7.52□□□□□ -1.21
USP43-203ENST00000570827 SYNJ2BPP57105 145 aa7.51□□□□□ -1.21
USP43-203ENST00000570827 ZNF580Q9UK33 172 aa7.51□□□□□ -1.21
USP43-203ENST00000570827 ZFHX3Q15911 3703 aa7.51□□□□□ -1.21
USP43-203ENST00000570827 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.51□□□□□ -1.21
USP43-203ENST00000570827 EDN2P20800 178 aa7.51□□□□□ -1.21
USP43-203ENST00000570827 TSPEAR-AS2P59090 65 aa7.51□□□□□ -1.21
USP43-203ENST00000570827 LY6G5BQ8NDX9 201 aa7.51□□□□□ -1.21
USP43-203ENST00000570827 NDUFA12Q9UI09 145 aa7.51□□□□□ -1.21
USP43-203ENST00000570827 PRM2P04554 102 aa7.51□□□□□ -1.21
USP43-203ENST00000570827 TCTEX1D4Q5JR98 221 aa7.51□□□□□ -1.21
USP43-203ENST00000570827 C10orf99Q6UWK7 81 aa7.51□□□□□ -1.21
USP43-203ENST00000570827 PIFOQ8TCI5 191 aa7.51□□□□□ -1.21
USP43-203ENST00000570827 DAZ1Q9NQZ3 744 aaKnown RBP7.51□□□□□ -1.21
USP43-203ENST00000570827 UBR5O95071 2799 aaPredicted RBP7.5□□□□□ -1.21
USP43-203ENST00000570827 ODF3BA8MYP8 253 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 CIRBPQ14011 172 aaKnown RBP7.5□□□□□ -1.21
USP43-203ENST00000570827 LINC01620Q4KN68 170 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 TRAV4A0A0B4J268 109 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 IGHV3-53P01767 116 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 HERV-K104P63124 156 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 TMEM141Q96I45 108 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 CARD19Q96LW7 228 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 CDIP1Q9H305 208 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.5□□□□□ -1.21
USP43-203ENST00000570827 TRAV13-1A0A0B4J241 112 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 IGHV4-61A0A0C4DH41 118 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 IGKV2-29A2NJV5 120 aaPredicted RBP7.5□□□□□ -1.21
USP43-203ENST00000570827 Q6ZSV7 163 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 Q8N1Y9 231 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 ZNRF2Q8NHG8 242 aa7.5□□□□□ -1.21
USP43-203ENST00000570827 AJUBAQ96IF1 538 aa7.49□□□□□ -1.21
USP43-203ENST00000570827 ITPR2Q14571 2701 aa7.49□□□□□ -1.21
USP43-203ENST00000570827 RNASE3P12724 160 aaKnown RBP7.49□□□□□ -1.21
USP43-203ENST00000570827 DEFB136Q30KP8 78 aa7.49□□□□□ -1.21
USP43-203ENST00000570827 OR13C6PQ8NH95 151 aa7.49□□□□□ -1.21
USP43-203ENST00000570827 ITLN2Q8WWU7 325 aaPredicted RBP7.49□□□□□ -1.21
USP43-203ENST00000570827 PRO0461Q9UI25 63 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms