RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 GAGE12BA1L429 117 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 PRSS29PA6NIE9 313 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 A8MWV9 139 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 GAGE7O76087 117 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 S100A6P06703 90 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 GAGE12FP0CL80 117 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 GAGE12GP0CL81 117 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 GAGE12IP0CL82 117 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 LGALS9BQ3B8N2 356 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 SUMO4Q6EEV6 95 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 POM121L12Q8N7R1 296 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 RS1O15537 224 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 IGHV3-53P01767 116 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 MIFP14174 115 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 SNRPEP62304 92 aaKnown RBP7.12□□□□□ -1.27
GDE1-205ENST00000569899 OR10J3Q5JRS4 329 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 UFSP1Q6NVU6 142 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 NRACQ8N912 160 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 RPL39LQ96EH5 51 aaKnown RBP7.12□□□□□ -1.27
GDE1-205ENST00000569899 MRAP2Q96G30 205 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 NDUFAF3Q9BU61 184 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 TP53TG1Q9Y2A0 90 aa7.12□□□□□ -1.27
GDE1-205ENST00000569899 F5H697 171 aa7.11□□□□□ -1.27
GDE1-205ENST00000569899 SERF1AO75920 110 aa7.11□□□□□ -1.27
GDE1-205ENST00000569899 PPBPP02775 128 aa7.11□□□□□ -1.27
GDE1-205ENST00000569899 Q0VG73 95 aa7.11□□□□□ -1.27
GDE1-205ENST00000569899 FAM222AQ5U5X8 452 aa7.11□□□□□ -1.27
GDE1-205ENST00000569899 SBSPONQ8IVN8 264 aa7.11□□□□□ -1.27
GDE1-205ENST00000569899 CELA1Q9UNI1 258 aa7.11□□□□□ -1.27
GDE1-205ENST00000569899 TENM3Q9P273 2699 aa7.1□□□□□ -1.27
GDE1-205ENST00000569899 TRAV4A0A0B4J268 109 aa7.1□□□□□ -1.27
GDE1-205ENST00000569899 RHODO00212 210 aa7.1□□□□□ -1.27
GDE1-205ENST00000569899 TNFRSF6BO95407 300 aa7.1□□□□□ -1.27
GDE1-205ENST00000569899 PDZD11Q5EBL8 140 aa7.1□□□□□ -1.27
GDE1-205ENST00000569899 DEFB121Q5J5C9 76 aa7.1□□□□□ -1.27
GDE1-205ENST00000569899 COA6Q5JTJ3 125 aaKnown RBP7.1□□□□□ -1.27
GDE1-205ENST00000569899 BAGE3Q86Y29 109 aa7.1□□□□□ -1.27
GDE1-205ENST00000569899 LINC00612Q8N6U2 182 aa7.1□□□□□ -1.27
GDE1-205ENST00000569899 OR4C5Q8NGB2 326 aa7.1□□□□□ -1.27
GDE1-205ENST00000569899 MRAPQ8TCY5 172 aa7.1□□□□□ -1.27
GDE1-205ENST00000569899 URB1-AS1Q96HZ7 61 aa7.1□□□□□ -1.27
GDE1-205ENST00000569899 ZNF479Q96JC4 524 aa7.1□□□□□ -1.27
GDE1-205ENST00000569899 TRGV2A0A075B6R0 118 aa7.09□□□□□ -1.27
GDE1-205ENST00000569899 LOC389332A0A1B0GUA5 103 aa7.09□□□□□ -1.27
GDE1-205ENST00000569899 C5orf52A6NGY3 159 aa7.09□□□□□ -1.27
GDE1-205ENST00000569899 NUPR1O60356 82 aa7.09□□□□□ -1.27
GDE1-205ENST00000569899 DEFB130BP0DP73 79 aa7.09□□□□□ -1.27
GDE1-205ENST00000569899 DEFB130AP0DP74 79 aa7.09□□□□□ -1.27
GDE1-205ENST00000569899 DKK2Q9UBU2 259 aa7.09□□□□□ -1.27
GDE1-205ENST00000569899 LAMTOR2Q9Y2Q5 125 aa7.09□□□□□ -1.27
GDE1-205ENST00000569899 LYRM9A8MSI8 78 aa7.09□□□□□ -1.28
GDE1-205ENST00000569899 M0QY20 66 aa7.09□□□□□ -1.28
GDE1-205ENST00000569899 P0DMU3 169 aa7.09□□□□□ -1.28
GDE1-205ENST00000569899 FAM231AP0DMU4 169 aa7.09□□□□□ -1.28
GDE1-205ENST00000569899 FAM231CP0DMU5 169 aa7.09□□□□□ -1.28
GDE1-205ENST00000569899 RNASEKQ6P5S7 137 aaKnown RBP7.09□□□□□ -1.28
GDE1-205ENST00000569899 CFAP161Q6P656 301 aa7.09□□□□□ -1.28
GDE1-205ENST00000569899 MAP1LC3AQ9H492 121 aa7.09□□□□□ -1.28
GDE1-205ENST00000569899 HUWE1Q7Z6Z7 4374 aaKnown RBP7.08□□□□□ -1.28
GDE1-205ENST00000569899 IFI27P40305 119 aaPredicted RBP7.08□□□□□ -1.28
GDE1-205ENST00000569899 ZFP2Q6ZN57 461 aa7.08□□□□□ -1.28
GDE1-205ENST00000569899 HIST3H2BBQ8N257 126 aa7.08□□□□□ -1.28
GDE1-205ENST00000569899 TM2D3Q9BRN9 247 aa7.08□□□□□ -1.28
GDE1-205ENST00000569899 IFITM10A6NMD0 228 aa7.07□□□□□ -1.28
GDE1-205ENST00000569899 EDA2RQ9HAV5 297 aa7.07□□□□□ -1.28
GDE1-205ENST00000569899 Q9UF83 564 aa7.07□□□□□ -1.28
GDE1-205ENST00000569899 IGLV2-18A0A075B6J9 118 aa7.06□□□□□ -1.28
GDE1-205ENST00000569899 LOC105371267A0A1B0GV96 52 aa7.06□□□□□ -1.28
GDE1-205ENST00000569899 GAGE12HA6NDE8 117 aa7.06□□□□□ -1.28
GDE1-205ENST00000569899 DAD1P61803 113 aa7.06□□□□□ -1.28
GDE1-205ENST00000569899 SUMO2P61956 95 aaKnown RBP7.06□□□□□ -1.28
GDE1-205ENST00000569899 LCE1DQ5T752 114 aa7.06□□□□□ -1.28
GDE1-205ENST00000569899 NEGR1Q7Z3B1 354 aa7.06□□□□□ -1.28
GDE1-205ENST00000569899 NIT1Q86X76 327 aa7.06□□□□□ -1.28
GDE1-205ENST00000569899 PRSS3P2Q8NHM4 247 aa7.06□□□□□ -1.28
GDE1-205ENST00000569899 SMIM2Q9BVW6 85 aa7.06□□□□□ -1.28
GDE1-205ENST00000569899 C11orf68Q9H3H3 251 aaKnown RBP7.06□□□□□ -1.28
GDE1-205ENST00000569899 H7C1H1 209 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 K7EQD1 137 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 ESDP10768 282 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 PMCHP20382 165 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 PMCHL1Q16048 86 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 FA2HQ7L5A8 372 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 NEXN-AS1Q8NBZ9 246 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 C18orf15Q96N68 181 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 ST20Q9HBF5 79 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 NIT2Q9NQR4 276 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 DNAH9Q9NYC9 4486 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 TRGV4A0A0C4DH28 118 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 A0A0J9YWU9 116 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 TRBV6-5A0A0K0K1A5 114 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 HSBP1O75506 76 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 PPP1R17O96001 155 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 LINC00614P0C842 121 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 SPART-AS1P0CW21 52 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 FHL2Q14192 279 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 FAM19A2Q8N3H0 131 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 Q8N8P6 123 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 SLC25A29Q8N8R3 303 aa7.05□□□□□ -1.28
GDE1-205ENST00000569899 CHCHD1Q96BP2 118 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms