RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 VAX2Q9UIW0 290 aa5.16□□□□□ -1.58
CDH3-209ENST00000569080 TEX46H3BTG2 121 aa5.15□□□□□ -1.59
CDH3-209ENST00000569080 M0QY20 66 aa5.15□□□□□ -1.59
CDH3-209ENST00000569080 LECT2O14960 151 aa5.15□□□□□ -1.59
CDH3-209ENST00000569080 CTRLP40313 264 aa5.15□□□□□ -1.59
CDH3-209ENST00000569080 MPV17L2Q567V2 206 aa5.15□□□□□ -1.59
CDH3-209ENST00000569080 TOR2AQ5JU69 321 aa5.15□□□□□ -1.59
CDH3-209ENST00000569080 Q5VSD8 79 aa5.15□□□□□ -1.59
CDH3-209ENST00000569080 AKAP14Q86UN6 197 aa5.15□□□□□ -1.59
CDH3-209ENST00000569080 FER1L6-AS1Q8NA97 138 aa5.15□□□□□ -1.59
CDH3-209ENST00000569080 OR2D3Q8NGH3 330 aa5.15□□□□□ -1.59
CDH3-209ENST00000569080 CNFNQ9BYD5 112 aa5.15□□□□□ -1.59
CDH3-209ENST00000569080 KLK12Q9UKR0 248 aa5.15□□□□□ -1.59
CDH3-209ENST00000569080 EPM2AB3EWF7 344 aa5.14□□□□□ -1.59
CDH3-209ENST00000569080 K7EN84 100 aa5.14□□□□□ -1.59
CDH3-209ENST00000569080 IFNA1P01562 189 aa5.14□□□□□ -1.59
CDH3-209ENST00000569080 RPS20P60866 119 aaKnown RBP5.14□□□□□ -1.59
CDH3-209ENST00000569080 SUMO4Q6EEV6 95 aa5.14□□□□□ -1.59
CDH3-209ENST00000569080 ENHOQ6UWT2 76 aa5.14□□□□□ -1.59
CDH3-209ENST00000569080 LYPD6BQ8NI32 183 aa5.14□□□□□ -1.59
CDH3-209ENST00000569080 BAALCQ8WXS3 180 aa5.14□□□□□ -1.59
CDH3-209ENST00000569080 MED9Q9NWA0 146 aa5.14□□□□□ -1.59
CDH3-209ENST00000569080 hCG_2014768A0A024R1R8 64 aa5.13□□□□□ -1.59
CDH3-209ENST00000569080 A0A087WX48 190 aa5.13□□□□□ -1.59
CDH3-209ENST00000569080 P01737 135 aa5.13□□□□□ -1.59
CDH3-209ENST00000569080 TAGLN2P37802 199 aaKnown RBP5.13□□□□□ -1.59
CDH3-209ENST00000569080 SSTP61278 116 aa5.13□□□□□ -1.59
CDH3-209ENST00000569080 CACNG7P62955 275 aa5.13□□□□□ -1.59
CDH3-209ENST00000569080 IQCJQ1A5X6 159 aa5.13□□□□□ -1.59
CDH3-209ENST00000569080 ALKAL2Q6UX46 152 aa5.13□□□□□ -1.59
CDH3-209ENST00000569080 UBE2WQ96B02 151 aa5.13□□□□□ -1.59
CDH3-209ENST00000569080 TPPP3Q9BW30 176 aa5.13□□□□□ -1.59
CDH3-209ENST00000569080 PRR34Q9NV39 138 aa5.13□□□□□ -1.59
CDH3-209ENST00000569080 COX11Q9Y6N1 276 aa5.13□□□□□ -1.59
CDH3-209ENST00000569080 URGCP-MRPS24S4R325 110 aa5.13□□□□□ -1.59
CDH3-209ENST00000569080 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.12□□□□□ -1.59
CDH3-209ENST00000569080 IGKV2D-24A0A075B6R9 120 aa5.12□□□□□ -1.59
CDH3-209ENST00000569080 F2Z2F3 143 aa5.12□□□□□ -1.59
CDH3-209ENST00000569080 F5H697 171 aa5.12□□□□□ -1.59
CDH3-209ENST00000569080 TMEM250H0YL14 139 aa5.12□□□□□ -1.59
CDH3-209ENST00000569080 SMIM17P0DL12 118 aa5.12□□□□□ -1.59
CDH3-209ENST00000569080 ELOBQ15370 118 aa5.12□□□□□ -1.59
CDH3-209ENST00000569080 KRTAP26-1Q6PEX3 210 aa5.12□□□□□ -1.59
CDH3-209ENST00000569080 LYZL1Q6UWQ5 148 aa5.12□□□□□ -1.59
CDH3-209ENST00000569080 Q8N976 141 aa5.12□□□□□ -1.59
CDH3-209ENST00000569080 NUDT10Q8NFP7 164 aa5.12□□□□□ -1.59
CDH3-209ENST00000569080 RMI2Q96E14 147 aa5.12□□□□□ -1.59
CDH3-209ENST00000569080 DAZAP1Q96EP5 407 aaKnown RBP5.12□□□□□ -1.59
CDH3-209ENST00000569080 NUDT11Q96G61 164 aa5.12□□□□□ -1.59
CDH3-209ENST00000569080 RNASE7Q9H1E1 156 aaKnown RBP5.12□□□□□ -1.59
CDH3-209ENST00000569080 RPP21Q9H633 154 aaKnown RBP5.12□□□□□ -1.59
CDH3-209ENST00000569080 FLG2Q5D862 2391 aaPredicted RBP5.11□□□□□ -1.59
CDH3-209ENST00000569080 DMBT1Q9UGM3 2413 aaPredicted RBP5.11□□□□□ -1.59
CDH3-209ENST00000569080 XKRY2A2RUG3 117 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 SMR3BP02814 79 aaPredicted RBP5.11□□□□□ -1.59
CDH3-209ENST00000569080 MGPP08493 103 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 RBX1P62877 108 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 Q0VG73 95 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 LINC01620Q4KN68 170 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 TMEM97Q5BJF2 176 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 C15orf54Q8N8G6 183 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 OCC1Q8TAD7 63 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 GTSF1Q8WW33 167 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 FRZBQ92765 325 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 CHCHD5Q9BSY4 110 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 DPH3P1Q9H4G8 78 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 BIN3Q9NQY0 253 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
CDH3-209ENST00000569080 TRBV25-1A0A075B6N4 114 aa5.1□□□□□ -1.59
CDH3-209ENST00000569080 A0A1B0GVG6 124 aa5.1□□□□□ -1.59
CDH3-209ENST00000569080 ANGP03950 147 aaKnown RBP5.1□□□□□ -1.59
CDH3-209ENST00000569080 TRGC1P0CF51 173 aa5.1□□□□□ -1.59
CDH3-209ENST00000569080 NTF3P20783 257 aa5.1□□□□□ -1.59
CDH3-209ENST00000569080 NKX2-5P52952 324 aaPredicted RBP5.1□□□□□ -1.59
CDH3-209ENST00000569080 PKIAP61925 76 aa5.1□□□□□ -1.59
CDH3-209ENST00000569080 WDR73Q6P4I2 378 aa5.1□□□□□ -1.59
CDH3-209ENST00000569080 RASL11AQ6T310 242 aa5.1□□□□□ -1.59
CDH3-209ENST00000569080 FAM231DQ6ZW35 169 aa5.1□□□□□ -1.59
CDH3-209ENST00000569080 C20orf203Q8NBC4 194 aa5.1□□□□□ -1.59
CDH3-209ENST00000569080 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
CDH3-209ENST00000569080 PGLYRP4Q96LB8 373 aa5.1□□□□□ -1.59
CDH3-209ENST00000569080 C1orf43Q9BWL3 253 aa5.1□□□□□ -1.59
CDH3-209ENST00000569080 LRP1Q07954 4544 aaKnown RBP5.1□□□□□ -1.59
CDH3-209ENST00000569080 IGHV1-24A0A0C4DH33 117 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 TMEM262E9PQX1 116 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 H7C1H1 209 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 NDUFS6O75380 124 aaKnown RBP5.09□□□□□ -1.59
CDH3-209ENST00000569080 CRPP02741 224 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 INAFM2P0DMQ5 153 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 BLOC1S1P78537 153 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 GAGE6Q13070 117 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 MIAQ16674 131 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 KCNIP4Q6PIL6 250 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 CLPSL2Q6UWE3 100 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 SCXQ7RTU7 201 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 GFRA4Q9GZZ7 299 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 NIT2Q9NQR4 276 aa5.09□□□□□ -1.59
CDH3-209ENST00000569080 IGLV4-60A0A075B6I1 120 aa5.08□□□□□ -1.6
CDH3-209ENST00000569080 TRAV26-2A0A0B4J265 109 aa5.08□□□□□ -1.6
CDH3-209ENST00000569080 USP17L23D6RBM5 183 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms