RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 IGLC1P0CG04 106 aa7.73□□□□□ -1.17
CDH3-208ENST00000569036 RPL11P62913 178 aaKnown RBP7.73□□□□□ -1.17
CDH3-208ENST00000569036 ZNF493Q6ZR52 646 aa7.73□□□□□ -1.17
CDH3-208ENST00000569036 Q86TA4 180 aa7.73□□□□□ -1.17
CDH3-208ENST00000569036 ATOH7Q8N100 152 aa7.73□□□□□ -1.17
CDH3-208ENST00000569036 TMEM75Q8N9X5 138 aa7.73□□□□□ -1.17
CDH3-208ENST00000569036 AP1S3Q96PC3 154 aa7.73□□□□□ -1.17
CDH3-208ENST00000569036 ATP6V0BQ99437 205 aa7.73□□□□□ -1.17
CDH3-208ENST00000569036 AP5S1Q9NUS5 200 aa7.73□□□□□ -1.17
CDH3-208ENST00000569036 IGKV1D-37A0A075B6S9 117 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 IGHV3OR16-12A0A075B7B8 117 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 A0A1B0GUT8 65 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 K7EQG2 157 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 APOHP02749 345 aaPredicted RBP7.72□□□□□ -1.17
CDH3-208ENST00000569036 NBEAP1P0C6P0 100 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 SCGB1A1P11684 91 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 HLA-DRB4P13762 266 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 CAMPP49913 170 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 PSG9Q00887 426 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 TMEM97Q5BJF2 176 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 PATE2Q6UY27 113 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 LINC00305Q7Z4B0 112 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 C21orf62Q9NYP8 219 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 HLA-DRB4X5D2U9 266 aa7.72□□□□□ -1.17
CDH3-208ENST00000569036 A0A087WTM6 91 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 IGHV3-66A0A0C4DH42 116 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 MUC21A0A0G2JKD1 596 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 MUC21A0A140T8X8 626 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 GAGE12BA1L429 117 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 PGPA6NDG6 321 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 C9orf118A6NHY6 69 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 CTSGP08311 255 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 MAJINQ3KP22 176 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 MUC21Q5SSG8 566 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 UFSP1Q6NVU6 142 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 FA2HQ7L5A8 372 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 UPK3BQ9BT76 320 aa7.71□□□□□ -1.18
CDH3-208ENST00000569036 CHTOPQ9Y3Y2 248 aaKnown RBP7.71□□□□□ -1.18
CDH3-208ENST00000569036 C7orf71A4D174 169 aa7.7□□□□□ -1.18
CDH3-208ENST00000569036 GAGE10A6NGK3 116 aa7.7□□□□□ -1.18
CDH3-208ENST00000569036 K7EP34 96 aa7.7□□□□□ -1.18
CDH3-208ENST00000569036 PYYP10082 97 aa7.7□□□□□ -1.18
CDH3-208ENST00000569036 PDE6HQ13956 83 aa7.7□□□□□ -1.18
CDH3-208ENST00000569036 COX8CQ7Z4L0 72 aa7.7□□□□□ -1.18
CDH3-208ENST00000569036 BOD1L2Q8IYS8 172 aa7.7□□□□□ -1.18
CDH3-208ENST00000569036 GTSF1Q8WW33 167 aa7.7□□□□□ -1.18
CDH3-208ENST00000569036 NPIPB3Q92617 1050 aa7.7□□□□□ -1.18
CDH3-208ENST00000569036 RNF125Q96EQ8 232 aa7.7□□□□□ -1.18
CDH3-208ENST00000569036 SSBP4Q9BWG4 385 aaPredicted RBP7.7□□□□□ -1.18
CDH3-208ENST00000569036 FAM30AQ9NZY2 134 aa7.7□□□□□ -1.18
CDH3-208ENST00000569036 HIGD1BQ9P298 99 aa7.7□□□□□ -1.18
CDH3-208ENST00000569036 TRAV5A0A0B4J249 113 aa7.69□□□□□ -1.18
CDH3-208ENST00000569036 F5H768 121 aa7.69□□□□□ -1.18
CDH3-208ENST00000569036 PSG1P11464 419 aa7.69□□□□□ -1.18
CDH3-208ENST00000569036 GATA2P23769 480 aaPredicted RBP7.69□□□□□ -1.18
CDH3-208ENST00000569036 S100A7P31151 101 aa7.69□□□□□ -1.18
CDH3-208ENST00000569036 KRTAP10-4P60372 401 aaPredicted RBP7.69□□□□□ -1.18
CDH3-208ENST00000569036 WT1-ASQ06250 92 aa7.69□□□□□ -1.18
CDH3-208ENST00000569036 AMMECR1LQ6DCA0 310 aa7.69□□□□□ -1.18
CDH3-208ENST00000569036 C2orf91Q6ZV80 131 aa7.69□□□□□ -1.18
CDH3-208ENST00000569036 HIGD1AQ9Y241 93 aa7.69□□□□□ -1.18
CDH3-208ENST00000569036 hDV102S1A0JD36 115 aa7.68□□□□□ -1.18
CDH3-208ENST00000569036 K7EIM0 57 aa7.68□□□□□ -1.18
CDH3-208ENST00000569036 CIDEAO60543 219 aa7.68□□□□□ -1.18
CDH3-208ENST00000569036 RNF151Q2KHN1 245 aa7.68□□□□□ -1.18
CDH3-208ENST00000569036 MORN5Q5VZ52 161 aa7.68□□□□□ -1.18
CDH3-208ENST00000569036 DCANP1Q8TF63 244 aa7.68□□□□□ -1.18
CDH3-208ENST00000569036 PGLYRP4Q96LB8 373 aa7.68□□□□□ -1.18
CDH3-208ENST00000569036 LINC00479Q96M42 142 aa7.68□□□□□ -1.18
CDH3-208ENST00000569036 LINC01546A6NGU7 62 aa7.67□□□□□ -1.18
CDH3-208ENST00000569036 FGF6P10767 208 aa7.67□□□□□ -1.18
CDH3-208ENST00000569036 PSG3Q16557 428 aa7.67□□□□□ -1.18
CDH3-208ENST00000569036 FER1L6-AS1Q8NA97 138 aa7.67□□□□□ -1.18
CDH3-208ENST00000569036 OR10W1Q8NGF6 305 aa7.67□□□□□ -1.18
CDH3-208ENST00000569036 SLC25A39Q9BZJ4 359 aaPredicted RBP7.67□□□□□ -1.18
CDH3-208ENST00000569036 MUC2Q02817 5179 aa7.67□□□□□ -1.18
CDH3-208ENST00000569036 CBY3A6NI87 242 aa7.66□□□□□ -1.18
CDH3-208ENST00000569036 H3BMM0 161 aa7.66□□□□□ -1.18
CDH3-208ENST00000569036 GAS8-AS1O95177 125 aa7.66□□□□□ -1.18
CDH3-208ENST00000569036 HBDP02042 147 aa7.66□□□□□ -1.18
CDH3-208ENST00000569036 GNG5P63218 68 aa7.66□□□□□ -1.18
CDH3-208ENST00000569036 NEGR1Q7Z3B1 354 aa7.66□□□□□ -1.18
CDH3-208ENST00000569036 OR1B1Q8NGR6 318 aa7.66□□□□□ -1.18
CDH3-208ENST00000569036 PRSS3P2Q8NHM4 247 aa7.66□□□□□ -1.18
CDH3-208ENST00000569036 BLNKQ8WV28 456 aa7.66□□□□□ -1.18
CDH3-208ENST00000569036 TNFRSF18Q9Y5U5 241 aa7.66□□□□□ -1.18
CDH3-208ENST00000569036 F11RQ9Y624 299 aaKnown RBP7.66□□□□□ -1.18
CDH3-208ENST00000569036 IGLV5-52A0A0A0MRZ9 124 aa7.65□□□□□ -1.18
CDH3-208ENST00000569036 J3QR89 54 aa7.65□□□□□ -1.18
CDH3-208ENST00000569036 SCGB2A1O75556 95 aa7.65□□□□□ -1.18
CDH3-208ENST00000569036 FXYD7P58549 80 aa7.65□□□□□ -1.18
CDH3-208ENST00000569036 TAL2Q16559 108 aa7.65□□□□□ -1.18
CDH3-208ENST00000569036 ORMDL3Q8N138 153 aa7.65□□□□□ -1.18
CDH3-208ENST00000569036 TRBV19A0A075B6N1 114 aa7.64□□□□□ -1.19
CDH3-208ENST00000569036 TRAV8-6A0A0B4J262 113 aa7.64□□□□□ -1.19
CDH3-208ENST00000569036 IGLV2-11P01706 119 aa7.64□□□□□ -1.19
CDH3-208ENST00000569036 MT1HL1P0DM35 61 aa7.64□□□□□ -1.19
CDH3-208ENST00000569036 DEFB130BP0DP73 79 aa7.64□□□□□ -1.19
CDH3-208ENST00000569036 DEFB130AP0DP74 79 aa7.64□□□□□ -1.19
CDH3-208ENST00000569036 FABP2P12104 132 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms