RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 SMIM27A0A1W2PRY6 76 aa11.71□□□□□ -0.53
COMMD4-220ENST00000567720 DNAH10OSP0CZ25 163 aa11.71□□□□□ -0.53
COMMD4-220ENST00000567720 PNRC1Q12796 327 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-220ENST00000567720 OR10J3Q5JRS4 329 aa11.71□□□□□ -0.53
COMMD4-220ENST00000567720 BORCS7Q96B45 105 aa11.71□□□□□ -0.53
COMMD4-220ENST00000567720 NAT8BQ9UHF3 227 aa11.71□□□□□ -0.53
COMMD4-220ENST00000567720 DNAH11Q96DT5 4516 aa11.71□□□□□ -0.54
COMMD4-220ENST00000567720 LINC00862A6NCI5 91 aa11.7□□□□□ -0.54
COMMD4-220ENST00000567720 TRAV26-2A0A0B4J265 109 aa11.69□□□□□ -0.54
COMMD4-220ENST00000567720 IGHV3-38A0A0C4DH36 116 aa11.69□□□□□ -0.54
COMMD4-220ENST00000567720 TMEM218A2RU14 115 aa11.69□□□□□ -0.54
COMMD4-220ENST00000567720 H7C1H1 209 aa11.69□□□□□ -0.54
COMMD4-220ENST00000567720 C1orf134Q5TEV5 83 aa11.69□□□□□ -0.54
COMMD4-220ENST00000567720 PKHD1P08F94 4074 aa11.69□□□□□ -0.54
COMMD4-220ENST00000567720 TRAV8-6A0A0B4J262 113 aa11.68□□□□□ -0.54
COMMD4-220ENST00000567720 RASL11AQ6T310 242 aa11.68□□□□□ -0.54
COMMD4-220ENST00000567720 SMIM15Q7Z3B0 74 aa11.68□□□□□ -0.54
COMMD4-220ENST00000567720 C6orf223Q8N319 242 aa11.68□□□□□ -0.54
COMMD4-220ENST00000567720 Q8N3U1 123 aa11.68□□□□□ -0.54
COMMD4-220ENST00000567720 GATD1Q8NB37 220 aa11.68□□□□□ -0.54
COMMD4-220ENST00000567720 LINC01556Q5JQF7 62 aa11.67□□□□□ -0.54
COMMD4-220ENST00000567720 TMEM191AQ9H0A3 160 aa11.67□□□□□ -0.54
COMMD4-220ENST00000567720 A0A087WWC5 75 aa11.66□□□□□ -0.54
COMMD4-220ENST00000567720 F8W036 122 aa11.66□□□□□ -0.54
COMMD4-220ENST00000567720 RIGQ13278 110 aa11.66□□□□□ -0.54
COMMD4-220ENST00000567720 DNAJC30Q96LL9 226 aa11.66□□□□□ -0.54
COMMD4-220ENST00000567720 PPP1R2P9O14990 202 aa11.65□□□□□ -0.54
COMMD4-220ENST00000567720 RPL39LQ96EH5 51 aaKnown RBP11.65□□□□□ -0.54
COMMD4-220ENST00000567720 RNF185Q96GF1 192 aa11.65□□□□□ -0.54
COMMD4-220ENST00000567720 NIT2Q9NQR4 276 aa11.65□□□□□ -0.54
COMMD4-220ENST00000567720 BIRC6Q9NR09 4857 aa11.65□□□□□ -0.55
COMMD4-220ENST00000567720 IGHV3-30P01768 117 aa11.64□□□□□ -0.55
COMMD4-220ENST00000567720 IGHV3-33P01772 117 aa11.64□□□□□ -0.55
COMMD4-220ENST00000567720 IGHV3-30-3P0DP02 117 aa11.64□□□□□ -0.55
COMMD4-220ENST00000567720 IGHV3-30-5P0DP03 117 aa11.64□□□□□ -0.55
COMMD4-220ENST00000567720 MRPL54Q6P161 138 aaKnown RBP11.64□□□□□ -0.55
COMMD4-220ENST00000567720 LINC00336Q6ZUF6 198 aa11.64□□□□□ -0.55
COMMD4-220ENST00000567720 DAZ4Q86SG3 579 aaKnown RBP11.64□□□□□ -0.55
COMMD4-220ENST00000567720 AMN1Q8IY45 258 aa11.64□□□□□ -0.55
COMMD4-220ENST00000567720 SEC11CQ9BY50 192 aa11.64□□□□□ -0.55
COMMD4-220ENST00000567720 DAZ3Q9NR90 486 aaKnown RBP11.64□□□□□ -0.55
COMMD4-220ENST00000567720 TNFRSF18Q9Y5U5 241 aa11.64□□□□□ -0.55
COMMD4-220ENST00000567720 TRBV6-8A0A0A6YYG3 113 aa11.63□□□□□ -0.55
COMMD4-220ENST00000567720 A0A1B0GXF2 115 aa11.63□□□□□ -0.55
COMMD4-220ENST00000567720 GAS8-AS1O95177 125 aa11.63□□□□□ -0.55
COMMD4-220ENST00000567720 Q6ZRN7 208 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-220ENST00000567720 NTM-AS1Q6ZSK4 140 aa11.63□□□□□ -0.55
COMMD4-220ENST00000567720 ANAPC16Q96DE5 110 aa11.63□□□□□ -0.55
COMMD4-220ENST00000567720 PRSS29PA6NIE9 313 aa11.62□□□□□ -0.55
COMMD4-220ENST00000567720 K7EP13 123 aa11.62□□□□□ -0.55
COMMD4-220ENST00000567720 MT-ND4LP03901 98 aa11.62□□□□□ -0.55
COMMD4-220ENST00000567720 NIT1Q86X76 327 aa11.62□□□□□ -0.55
COMMD4-220ENST00000567720 C10orf126Q8N4M7 172 aa11.62□□□□□ -0.55
COMMD4-220ENST00000567720 TRAV9-2A0A087WT02 112 aa11.61□□□□□ -0.55
COMMD4-220ENST00000567720 BTF3P20290 206 aaKnown RBP11.61□□□□□ -0.55
COMMD4-220ENST00000567720 RAB4AP20338 218 aa11.61□□□□□ -0.55
COMMD4-220ENST00000567720 CAMPP49913 170 aa11.61□□□□□ -0.55
COMMD4-220ENST00000567720 C10orf91Q5T1B1 145 aa11.61□□□□□ -0.55
COMMD4-220ENST00000567720 FRZBQ92765 325 aa11.61□□□□□ -0.55
COMMD4-220ENST00000567720 DYNC1H1Q14204 4646 aaKnown RBP11.61□□□□□ -0.55
COMMD4-220ENST00000567720 A0A1B0GVY2 172 aa11.6□□□□□ -0.55
COMMD4-220ENST00000567720 A0A1B0GW15 77 aa11.6□□□□□ -0.55
COMMD4-220ENST00000567720 NCR2O95944 276 aa11.6□□□□□ -0.55
COMMD4-220ENST00000567720 RPS10P46783 165 aaKnown RBP11.6□□□□□ -0.55
COMMD4-220ENST00000567720 HBBP68871 147 aa11.6□□□□□ -0.55
COMMD4-220ENST00000567720 TNP2Q05952 138 aa11.6□□□□□ -0.55
COMMD4-220ENST00000567720 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.6□□□□□ -0.55
COMMD4-220ENST00000567720 CARHSP1Q9Y2V2 147 aaKnown RBP11.6□□□□□ -0.55
COMMD4-220ENST00000567720 SMKR1H3BMG3 65 aa11.59□□□□□ -0.55
COMMD4-220ENST00000567720 TMEM97Q5BJF2 176 aa11.59□□□□□ -0.55
COMMD4-220ENST00000567720 DEFB104AQ8WTQ1 72 aa11.59□□□□□ -0.55
COMMD4-220ENST00000567720 MRAP2Q96G30 205 aa11.59□□□□□ -0.55
COMMD4-220ENST00000567720 TRBV25-1A0A075B6N4 114 aa11.58□□□□□ -0.56
COMMD4-220ENST00000567720 TRBV6-5A0A0K0K1A5 114 aa11.58□□□□□ -0.56
COMMD4-220ENST00000567720 IBA57-AS1B1ANH7 110 aa11.58□□□□□ -0.56
COMMD4-220ENST00000567720 IQCJQ1A5X6 159 aa11.58□□□□□ -0.56
COMMD4-220ENST00000567720 MRPL51Q4U2R6 128 aaKnown RBP11.58□□□□□ -0.56
COMMD4-220ENST00000567720 FAM104BQ5XKR9 115 aa11.58□□□□□ -0.56
COMMD4-220ENST00000567720 ATP5L2Q7Z4Y8 100 aa11.58□□□□□ -0.56
COMMD4-220ENST00000567720 DNAH5Q8TE73 4624 aa11.58□□□□□ -0.56
COMMD4-220ENST00000567720 SDHAF1A6NFY7 115 aa11.57□□□□□ -0.56
COMMD4-220ENST00000567720 LAGE3Q14657 143 aa11.57□□□□□ -0.56
COMMD4-220ENST00000567720 MPV17L2Q567V2 206 aa11.57□□□□□ -0.56
COMMD4-220ENST00000567720 CHCHD5Q9BSY4 110 aa11.57□□□□□ -0.56
COMMD4-220ENST00000567720 IGHV1-24A0A0C4DH33 117 aa11.56□□□□□ -0.56
COMMD4-220ENST00000567720 KCNIP4Q6PIL6 250 aa11.56□□□□□ -0.56
COMMD4-220ENST00000567720 NRACQ8N912 160 aa11.56□□□□□ -0.56
COMMD4-220ENST00000567720 CHCHD7Q9BUK0 85 aa11.56□□□□□ -0.56
COMMD4-220ENST00000567720 Q9HAA7 133 aa11.56□□□□□ -0.56
COMMD4-220ENST00000567720 URGCP-MRPS24S4R325 110 aa11.56□□□□□ -0.56
COMMD4-220ENST00000567720 A0A087WX48 190 aa11.55□□□□□ -0.56
COMMD4-220ENST00000567720 S100A8P05109 93 aa11.55□□□□□ -0.56
COMMD4-220ENST00000567720 COTL1Q14019 142 aa11.55□□□□□ -0.56
COMMD4-220ENST00000567720 NFE4Q86UQ8 179 aa11.55□□□□□ -0.56
COMMD4-220ENST00000567720 TMEM70Q9BUB7 260 aa11.55□□□□□ -0.56
COMMD4-220ENST00000567720 CTDSP1Q9GZU7 261 aa11.55□□□□□ -0.56
COMMD4-220ENST00000567720 GAGE6Q13070 117 aa11.54□□□□□ -0.56
COMMD4-220ENST00000567720 AMTP48728 403 aa11.53□□□□□ -0.56
COMMD4-220ENST00000567720 Q8N976 141 aa11.53□□□□□ -0.56
COMMD4-220ENST00000567720 CLRN3Q8NCR9 226 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms