RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 P01737 135 aa7.46□□□□□ -1.22
CDH3-206ENST00000567674 IGHV3-30P01768 117 aa7.46□□□□□ -1.22
CDH3-206ENST00000567674 IGHV3-33P01772 117 aa7.46□□□□□ -1.22
CDH3-206ENST00000567674 TRGC1P0CF51 173 aa7.46□□□□□ -1.22
CDH3-206ENST00000567674 IGHV3-30-3P0DP02 117 aa7.46□□□□□ -1.22
CDH3-206ENST00000567674 IGHV3-30-5P0DP03 117 aa7.46□□□□□ -1.22
CDH3-206ENST00000567674 Q8N976 141 aa7.46□□□□□ -1.22
CDH3-206ENST00000567674 FER1L6-AS1Q8NA97 138 aa7.46□□□□□ -1.22
CDH3-206ENST00000567674 CNFNQ9BYD5 112 aa7.46□□□□□ -1.22
CDH3-206ENST00000567674 MED9Q9NWA0 146 aa7.46□□□□□ -1.22
CDH3-206ENST00000567674 IGLV5-52A0A0A0MRZ9 124 aa7.45□□□□□ -1.22
CDH3-206ENST00000567674 ZNF56Q15929 161 aa7.45□□□□□ -1.22
CDH3-206ENST00000567674 NEXN-AS1Q8NBZ9 246 aa7.45□□□□□ -1.22
CDH3-206ENST00000567674 OR2D3Q8NGH3 330 aa7.45□□□□□ -1.22
CDH3-206ENST00000567674 DERL1Q9BUN8 251 aa7.45□□□□□ -1.22
CDH3-206ENST00000567674 RPL19P84098 196 aaKnown RBP7.44□□□□□ -1.22
CDH3-206ENST00000567674 C14orf177Q52M58 125 aa7.44□□□□□ -1.22
CDH3-206ENST00000567674 Q9UF83 564 aa7.44□□□□□ -1.22
CDH3-206ENST00000567674 F5H697 171 aa7.43□□□□□ -1.22
CDH3-206ENST00000567674 XGP55808 180 aa7.43□□□□□ -1.22
CDH3-206ENST00000567674 IQCJQ1A5X6 159 aa7.43□□□□□ -1.22
CDH3-206ENST00000567674 TEX261Q6UWH6 196 aa7.43□□□□□ -1.22
CDH3-206ENST00000567674 FAM231DQ6ZW35 169 aa7.43□□□□□ -1.22
CDH3-206ENST00000567674 PGLYRP4Q96LB8 373 aa7.43□□□□□ -1.22
CDH3-206ENST00000567674 Q9HAA7 133 aa7.43□□□□□ -1.22
CDH3-206ENST00000567674 TRBV20OR9-2A0A075B6H5 130 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 TRBV25-1A0A075B6N4 114 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 A0A1B0GUV1 79 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 FAM231BA6NCW3 169 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 EPM2AB3EWF7 344 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 M0QY20 66 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 INAFM2P0DMQ5 153 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 CTRLP40313 264 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
CDH3-206ENST00000567674 MIAQ16674 131 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 CT83Q5H943 113 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 NUDT10Q8NFP7 164 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 NUDT11Q96G61 164 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 DPH3P1Q9H4G8 78 aa7.42□□□□□ -1.22
CDH3-206ENST00000567674 RAB19A4D1S5 217 aa7.41□□□□□ -1.22
CDH3-206ENST00000567674 NTF3P20783 257 aa7.41□□□□□ -1.22
CDH3-206ENST00000567674 KRTAP10-1P60331 282 aa7.41□□□□□ -1.22
CDH3-206ENST00000567674 RASL11AQ6T310 242 aa7.41□□□□□ -1.22
CDH3-206ENST00000567674 RPP21Q9H633 154 aaKnown RBP7.41□□□□□ -1.22
CDH3-206ENST00000567674 NIT2Q9NQR4 276 aa7.41□□□□□ -1.22
CDH3-206ENST00000567674 PRR34Q9NV39 138 aa7.41□□□□□ -1.22
CDH3-206ENST00000567674 SRRM2Q9UQ35 2752 aaKnown RBP7.4□□□□□ -1.22
CDH3-206ENST00000567674 IGHV1-24A0A0C4DH33 117 aa7.4□□□□□ -1.22
CDH3-206ENST00000567674 A8MWL6 223 aa7.4□□□□□ -1.22
CDH3-206ENST00000567674 TMEM262E9PQX1 116 aa7.4□□□□□ -1.22
CDH3-206ENST00000567674 FAM229AH3BQW9 127 aa7.4□□□□□ -1.22
CDH3-206ENST00000567674 GZMBP10144 247 aa7.4□□□□□ -1.22
CDH3-206ENST00000567674 Q6ZSA8 131 aa7.4□□□□□ -1.22
CDH3-206ENST00000567674 SMIM15Q7Z3B0 74 aa7.4□□□□□ -1.22
CDH3-206ENST00000567674 OCC1Q8TAD7 63 aa7.4□□□□□ -1.22
CDH3-206ENST00000567674 C1orf43Q9BWL3 253 aa7.4□□□□□ -1.22
CDH3-206ENST00000567674 KLK12Q9UKR0 248 aa7.4□□□□□ -1.22
CDH3-206ENST00000567674 TRAV8-4A0A0B4J246 113 aa7.39□□□□□ -1.23
CDH3-206ENST00000567674 CRPP02741 224 aa7.39□□□□□ -1.23
CDH3-206ENST00000567674 DGAT2L7PQ6IED9 249 aa7.39□□□□□ -1.23
CDH3-206ENST00000567674 LYZL1Q6UWQ5 148 aa7.39□□□□□ -1.23
CDH3-206ENST00000567674 GFRA4Q9GZZ7 299 aa7.39□□□□□ -1.23
CDH3-206ENST00000567674 SMDT1Q9H4I9 107 aa7.39□□□□□ -1.23
CDH3-206ENST00000567674 IGKV2D-24A0A075B6R9 120 aa7.38□□□□□ -1.23
CDH3-206ENST00000567674 H7C423 109 aa7.38□□□□□ -1.23
CDH3-206ENST00000567674 NCR2O95944 276 aa7.38□□□□□ -1.23
CDH3-206ENST00000567674 FAM74A3Q4VXF1 159 aa7.38□□□□□ -1.23
CDH3-206ENST00000567674 NTM-AS1Q6ZSK4 140 aa7.38□□□□□ -1.23
CDH3-206ENST00000567674 CLRN3Q8NCR9 226 aa7.38□□□□□ -1.23
CDH3-206ENST00000567674 UBE2WQ96B02 151 aa7.38□□□□□ -1.23
CDH3-206ENST00000567674 CHCHD5Q9BSY4 110 aa7.38□□□□□ -1.23
CDH3-206ENST00000567674 TPPP3Q9BW30 176 aa7.38□□□□□ -1.23
CDH3-206ENST00000567674 DNAH8Q96JB1 4490 aa7.38□□□□□ -1.23
CDH3-206ENST00000567674 FAT1Q14517 4588 aa7.37□□□□□ -1.23
CDH3-206ENST00000567674 ANGP03950 147 aaKnown RBP7.37□□□□□ -1.23
CDH3-206ENST00000567674 SUMO4Q6EEV6 95 aa7.37□□□□□ -1.23
CDH3-206ENST00000567674 ENHOQ6UWT2 76 aa7.37□□□□□ -1.23
CDH3-206ENST00000567674 ALKAL2Q6UX46 152 aa7.37□□□□□ -1.23
CDH3-206ENST00000567674 K7EN84 100 aa7.36□□□□□ -1.23
CDH3-206ENST00000567674 TWIST1Q15672 202 aa7.36□□□□□ -1.23
CDH3-206ENST00000567674 MPV17L2Q567V2 206 aa7.36□□□□□ -1.23
CDH3-206ENST00000567674 VPS13BQ7Z7G8 4022 aa7.35□□□□□ -1.23
CDH3-206ENST00000567674 MUC21A0A0G2JKD1 596 aa7.35□□□□□ -1.23
CDH3-206ENST00000567674 MUC21A0A140T8X8 626 aa7.35□□□□□ -1.23
CDH3-206ENST00000567674 GATCO43716 136 aaKnown RBP7.35□□□□□ -1.23
CDH3-206ENST00000567674 MGPP08493 103 aa7.35□□□□□ -1.23
CDH3-206ENST00000567674 RBX1P62877 108 aa7.35□□□□□ -1.23
CDH3-206ENST00000567674 COTL1Q14019 142 aa7.35□□□□□ -1.23
CDH3-206ENST00000567674 Q8N3U1 123 aa7.35□□□□□ -1.23
CDH3-206ENST00000567674 BAALCQ8WXS3 180 aa7.35□□□□□ -1.23
CDH3-206ENST00000567674 BORCS7Q96B45 105 aa7.35□□□□□ -1.23
CDH3-206ENST00000567674 TMEM243Q9BU79 118 aa7.35□□□□□ -1.23
CDH3-206ENST00000567674 EIF5A2Q9GZV4 153 aaKnown RBP7.35□□□□□ -1.23
CDH3-206ENST00000567674 OSTCQ9NRP0 149 aa7.35□□□□□ -1.23
CDH3-206ENST00000567674 TRBV6-5A0A0K0K1A5 114 aa7.34□□□□□ -1.23
CDH3-206ENST00000567674 PPP1R17O96001 155 aa7.34□□□□□ -1.23
CDH3-206ENST00000567674 LINC01551Q86U37 167 aa7.34□□□□□ -1.23
CDH3-206ENST00000567674 C15orf54Q8N8G6 183 aa7.34□□□□□ -1.23
CDH3-206ENST00000567674 TSKUQ8WUA8 353 aa7.34□□□□□ -1.23
CDH3-206ENST00000567674 RNASE7Q9H1E1 156 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms