RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 LINC00173Q6ZV60 143 aa7.83□□□□□ -1.16
VPS9D1-206ENST00000567379 OR4C5Q8NGB2 326 aa7.83□□□□□ -1.16
VPS9D1-206ENST00000567379 RYR3Q15413 4870 aa7.83□□□□□ -1.16
VPS9D1-206ENST00000567379 IGHV3-73A0A0B4J1V6 119 aa7.82□□□□□ -1.16
VPS9D1-206ENST00000567379 SDHAF1A6NFY7 115 aa7.82□□□□□ -1.16
VPS9D1-206ENST00000567379 SYS1-DBNDD2H3BUS1 97 aa7.82□□□□□ -1.16
VPS9D1-206ENST00000567379 TCAPO15273 167 aa7.82□□□□□ -1.16
VPS9D1-206ENST00000567379 NUDT3O95989 172 aa7.82□□□□□ -1.16
VPS9D1-206ENST00000567379 G0S2P27469 103 aa7.82□□□□□ -1.16
VPS9D1-206ENST00000567379 POLR2KP53803 58 aaKnown RBP7.82□□□□□ -1.16
VPS9D1-206ENST00000567379 OXLD1Q5BKU9 147 aa7.82□□□□□ -1.16
VPS9D1-206ENST00000567379 KIR2DL4Q99706 377 aa7.82□□□□□ -1.16
VPS9D1-206ENST00000567379 OVOL2Q9BRP0 275 aa7.82□□□□□ -1.16
VPS9D1-206ENST00000567379 NOP10Q9NPE3 64 aaKnown RBP7.82□□□□□ -1.16
VPS9D1-206ENST00000567379 PRKDCP78527 4128 aaKnown RBP7.81□□□□□ -1.16
VPS9D1-206ENST00000567379 TRAV4A0A0B4J268 109 aa7.81□□□□□ -1.16
VPS9D1-206ENST00000567379 PCP4L1A6NKN8 68 aa7.81□□□□□ -1.16
VPS9D1-206ENST00000567379 ATP5LO75964 103 aa7.81□□□□□ -1.16
VPS9D1-206ENST00000567379 DEFA6Q01524 100 aa7.81□□□□□ -1.16
VPS9D1-206ENST00000567379 TEX43Q6ZNM6 134 aa7.81□□□□□ -1.16
VPS9D1-206ENST00000567379 Q6ZTI0 123 aa7.81□□□□□ -1.16
VPS9D1-206ENST00000567379 Q8N976 141 aa7.81□□□□□ -1.16
VPS9D1-206ENST00000567379 IFI27L1Q96BM0 104 aa7.81□□□□□ -1.16
VPS9D1-206ENST00000567379 TENM1Q9UKZ4 2725 aa7.81□□□□□ -1.16
VPS9D1-206ENST00000567379 TRBV27A0A0K0K1C4 114 aa7.8□□□□□ -1.16
VPS9D1-206ENST00000567379 PLAC8L1A1L4L8 177 aa7.8□□□□□ -1.16
VPS9D1-206ENST00000567379 LINC01549A6NIU2 74 aa7.8□□□□□ -1.16
VPS9D1-206ENST00000567379 CIDEAO60543 219 aa7.8□□□□□ -1.16
VPS9D1-206ENST00000567379 IGHV3-53P01767 116 aa7.8□□□□□ -1.16
VPS9D1-206ENST00000567379 EGFEM1PQ0D2K5 195 aa7.8□□□□□ -1.16
VPS9D1-206ENST00000567379 DNAJC30Q96LL9 226 aa7.8□□□□□ -1.16
VPS9D1-206ENST00000567379 TNFRSF18Q9Y5U5 241 aa7.8□□□□□ -1.16
VPS9D1-206ENST00000567379 NOTCH3Q9UM47 2321 aa7.8□□□□□ -1.16
VPS9D1-206ENST00000567379 NACAE9PAV3 2078 aa7.79□□□□□ -1.16
VPS9D1-206ENST00000567379 TRGV2A0A075B6R0 118 aa7.79□□□□□ -1.16
VPS9D1-206ENST00000567379 TSTD3H0UI37 97 aa7.79□□□□□ -1.16
VPS9D1-206ENST00000567379 H0Y8G0 127 aa7.79□□□□□ -1.16
VPS9D1-206ENST00000567379 I3L3M4 83 aa7.79□□□□□ -1.16
VPS9D1-206ENST00000567379 IGHV4-30-4P0DP06 118 aa7.79□□□□□ -1.16
VPS9D1-206ENST00000567379 PKIAP61925 76 aa7.79□□□□□ -1.16
VPS9D1-206ENST00000567379 SPATA12Q7Z6I5 190 aa7.79□□□□□ -1.16
VPS9D1-206ENST00000567379 VAMP8Q9BV40 100 aa7.79□□□□□ -1.16
VPS9D1-206ENST00000567379 X6R8D5 127 aa7.79□□□□□ -1.16
VPS9D1-206ENST00000567379 GAGE12BA1L429 117 aa7.78□□□□□ -1.16
VPS9D1-206ENST00000567379 GAGE7O76087 117 aa7.78□□□□□ -1.16
VPS9D1-206ENST00000567379 GAGE12FP0CL80 117 aa7.78□□□□□ -1.16
VPS9D1-206ENST00000567379 GAGE12GP0CL81 117 aa7.78□□□□□ -1.16
VPS9D1-206ENST00000567379 GAGE12IP0CL82 117 aa7.78□□□□□ -1.16
VPS9D1-206ENST00000567379 KRTAP10-11P60412 298 aa7.78□□□□□ -1.16
VPS9D1-206ENST00000567379 RHOHQ15669 191 aa7.78□□□□□ -1.16
VPS9D1-206ENST00000567379 DEFB135Q30KP9 77 aa7.78□□□□□ -1.16
VPS9D1-206ENST00000567379 NEGR1Q7Z3B1 354 aa7.78□□□□□ -1.16
VPS9D1-206ENST00000567379 TOMM6Q96B49 74 aa7.78□□□□□ -1.16
VPS9D1-206ENST00000567379 C18orf15Q96N68 181 aa7.78□□□□□ -1.16
VPS9D1-206ENST00000567379 TRRAPQ9Y4A5 3859 aa7.78□□□□□ -1.16
VPS9D1-206ENST00000567379 P0DMU3 169 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 FAM231AP0DMU4 169 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 FAM231CP0DMU5 169 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 EMP1P54849 157 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 LINC01545Q5VT33 79 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 LGALS9CQ6DKI2 356 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 C2orf66Q6UXQ4 117 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 Q6ZSN1 163 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 ZNF664Q8N3J9 261 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 OR11H2Q8NH07 326 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 ZNF479Q96JC4 524 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 SCGB3A1Q96QR1 104 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 PRO1933Q9H354 126 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 CYSLTR1Q9Y271 337 aa7.77□□□□□ -1.17
VPS9D1-206ENST00000567379 TRAV9-2A0A087WT02 112 aa7.76□□□□□ -1.17
VPS9D1-206ENST00000567379 TRBV10-1A0A0K0K1A3 114 aa7.76□□□□□ -1.17
VPS9D1-206ENST00000567379 A8MZ25 164 aa7.76□□□□□ -1.17
VPS9D1-206ENST00000567379 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.76□□□□□ -1.17
VPS9D1-206ENST00000567379 K7EQD1 137 aa7.76□□□□□ -1.17
VPS9D1-206ENST00000567379 PRSS1P07477 247 aa7.76□□□□□ -1.17
VPS9D1-206ENST00000567379 Q6ZN92 141 aa7.76□□□□□ -1.17
VPS9D1-206ENST00000567379 TRGV4A0A0C4DH28 118 aa7.75□□□□□ -1.17
VPS9D1-206ENST00000567379 LYRM9A8MSI8 78 aa7.75□□□□□ -1.17
VPS9D1-206ENST00000567379 HSBP1L1C9JCN9 74 aa7.75□□□□□ -1.17
VPS9D1-206ENST00000567379 TSHBP01222 138 aa7.75□□□□□ -1.17
VPS9D1-206ENST00000567379 MIFP14174 115 aa7.75□□□□□ -1.17
VPS9D1-206ENST00000567379 ATOH7Q8N100 152 aa7.75□□□□□ -1.17
VPS9D1-206ENST00000567379 RNF183Q96D59 192 aa7.75□□□□□ -1.17
VPS9D1-206ENST00000567379 PAM16Q9Y3D7 125 aa7.75□□□□□ -1.17
VPS9D1-206ENST00000567379 VWFP04275 2813 aa7.74□□□□□ -1.17
VPS9D1-206ENST00000567379 RPL36AP83881 106 aaKnown RBP7.74□□□□□ -1.17
VPS9D1-206ENST00000567379 SPATA45Q537H7 98 aa7.74□□□□□ -1.17
VPS9D1-206ENST00000567379 SAMD5Q5TGI4 173 aa7.74□□□□□ -1.17
VPS9D1-206ENST00000567379 ERASQ7Z444 233 aa7.74□□□□□ -1.17
VPS9D1-206ENST00000567379 LINC00612Q8N6U2 182 aa7.74□□□□□ -1.17
VPS9D1-206ENST00000567379 RPL36ALQ969Q0 106 aaKnown RBP7.74□□□□□ -1.17
VPS9D1-206ENST00000567379 TP53TG1Q9Y2A0 90 aa7.74□□□□□ -1.17
VPS9D1-206ENST00000567379 TRBV7-3A0A075B6L6 115 aa7.73□□□□□ -1.17
VPS9D1-206ENST00000567379 IGHV4-28A0A0C4DH34 117 aa7.73□□□□□ -1.17
VPS9D1-206ENST00000567379 TRBV6-4A0A1B0GX49 114 aa7.73□□□□□ -1.17
VPS9D1-206ENST00000567379 G3V4G9 280 aa7.73□□□□□ -1.17
VPS9D1-206ENST00000567379 DEFB130BP0DP73 79 aa7.73□□□□□ -1.17
VPS9D1-206ENST00000567379 DEFB130AP0DP74 79 aa7.73□□□□□ -1.17
VPS9D1-206ENST00000567379 COTL1Q14019 142 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms