RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 IGHV1OR15-1A0A075B7D0 117 aa12.41□□□□□ -0.42
CMTM3-213ENST00000566756 ELANEP08246 267 aa12.41□□□□□ -0.42
CMTM3-213ENST00000566756 ZNF688P0C7X2 276 aa12.41□□□□□ -0.42
CMTM3-213ENST00000566756 SCGB1D4Q6XE38 83 aa12.41□□□□□ -0.42
CMTM3-213ENST00000566756 TRPT1Q86TN4 253 aaKnown RBP12.41□□□□□ -0.42
CMTM3-213ENST00000566756 ZNF256Q9Y2P7 627 aaPredicted RBP12.41□□□□□ -0.42
CMTM3-213ENST00000566756 SELENOKQ9Y6D0 94 aa12.41□□□□□ -0.42
CMTM3-213ENST00000566756 AGRNO00468 2067 aa12.41□□□□□ -0.42
CMTM3-213ENST00000566756 A0A087WWL8 130 aa12.41□□□□□ -0.42
CMTM3-213ENST00000566756 M0QY20 66 aa12.41□□□□□ -0.42
CMTM3-213ENST00000566756 TEX48A0A1B0GUV7 120 aa12.4□□□□□ -0.42
CMTM3-213ENST00000566756 J3QR89 54 aa12.4□□□□□ -0.42
CMTM3-213ENST00000566756 MORN3Q6PF18 240 aaPredicted RBP12.4□□□□□ -0.42
CMTM3-213ENST00000566756 NFE4Q86UQ8 179 aa12.4□□□□□ -0.42
CMTM3-213ENST00000566756 EDA2RQ9HAV5 297 aa12.4□□□□□ -0.42
CMTM3-213ENST00000566756 YAE1D1Q9NRH1 226 aa12.4□□□□□ -0.42
CMTM3-213ENST00000566756 HECTD1Q9ULT8 2610 aa12.4□□□□□ -0.42
CMTM3-213ENST00000566756 SONP18583 2426 aaKnown RBP12.4□□□□□ -0.42
CMTM3-213ENST00000566756 RPL24P83731 157 aaKnown RBP12.39□□□□□ -0.43
CMTM3-213ENST00000566756 Q8N1Y9 231 aa12.39□□□□□ -0.43
CMTM3-213ENST00000566756 ACANP16112 2415 aa12.39□□□□□ -0.43
CMTM3-213ENST00000566756 TRGV11A0A075B6L2 103 aa12.39□□□□□ -0.43
CMTM3-213ENST00000566756 CD300EQ496F6 205 aaPredicted RBP12.39□□□□□ -0.43
CMTM3-213ENST00000566756 MDFICQ9P1T7 246 aa12.39□□□□□ -0.43
CMTM3-213ENST00000566756 A0A0J9YY99 117 aa12.38□□□□□ -0.43
CMTM3-213ENST00000566756 RPL39P62891 51 aaKnown RBP12.38□□□□□ -0.43
CMTM3-213ENST00000566756 SRSF9Q13242 221 aaKnown RBP eCLIP12.38□□□□□ -0.43
CMTM3-213ENST00000566756 GAGE13Q4V321 117 aa12.38□□□□□ -0.43
CMTM3-213ENST00000566756 C10orf99Q6UWK7 81 aa12.38□□□□□ -0.43
CMTM3-213ENST00000566756 PLEKHB2Q96CS7 222 aa12.38□□□□□ -0.43
CMTM3-213ENST00000566756 MYO9AB2RTY4 2548 aa12.38□□□□□ -0.43
CMTM3-213ENST00000566756 H3BMG7 143 aa12.38□□□□□ -0.43
CMTM3-213ENST00000566756 UBE2E2Q96LR5 201 aa12.38□□□□□ -0.43
CMTM3-213ENST00000566756 PRO0461Q9UI25 63 aa12.38□□□□□ -0.43
CMTM3-213ENST00000566756 ZNF56Q15929 161 aa12.37□□□□□ -0.43
CMTM3-213ENST00000566756 LYRM7Q5U5X0 104 aa12.37□□□□□ -0.43
CMTM3-213ENST00000566756 WFDC2Q14508 124 aa12.36□□□□□ -0.43
CMTM3-213ENST00000566756 AMTNQ6UX39 209 aa12.36□□□□□ -0.43
CMTM3-213ENST00000566756 WFDC12Q8WWY7 111 aa12.36□□□□□ -0.43
CMTM3-213ENST00000566756 DUX5Q96PT3 197 aa12.36□□□□□ -0.43
CMTM3-213ENST00000566756 PGPEP1Q9NXJ5 209 aa12.36□□□□□ -0.43
CMTM3-213ENST00000566756 AKAP9Q99996 3911 aa12.36□□□□□ -0.43
CMTM3-213ENST00000566756 DNAJC9-AS1A6NH13 148 aa12.36□□□□□ -0.43
CMTM3-213ENST00000566756 FAM74A4Q5TZK3 123 aa12.36□□□□□ -0.43
CMTM3-213ENST00000566756 SLC25A29Q8N8R3 303 aa12.36□□□□□ -0.43
CMTM3-213ENST00000566756 KLHL30-AS1Q8NEE0 82 aa12.36□□□□□ -0.43
CMTM3-213ENST00000566756 TRAV12-2A0A075B6T6 113 aa12.35□□□□□ -0.43
CMTM3-213ENST00000566756 A8MTW9 85 aa12.35□□□□□ -0.43
CMTM3-213ENST00000566756 I3L3M4 83 aa12.35□□□□□ -0.43
CMTM3-213ENST00000566756 C20orf203Q8NBC4 194 aa12.35□□□□□ -0.43
CMTM3-213ENST00000566756 ZNRF2Q8NHG8 242 aa12.35□□□□□ -0.43
CMTM3-213ENST00000566756 MRPL16Q9NX20 251 aaKnown RBP12.35□□□□□ -0.43
CMTM3-213ENST00000566756 SYNJ2BPP57105 145 aa12.34□□□□□ -0.43
CMTM3-213ENST00000566756 SPINK13Q1W4C9 94 aa12.34□□□□□ -0.43
CMTM3-213ENST00000566756 PIK3CD-AS1Q5SR53 167 aa12.34□□□□□ -0.43
CMTM3-213ENST00000566756 TMEM170BQ5T4T1 132 aa12.34□□□□□ -0.43
CMTM3-213ENST00000566756 DLX4Q92988 240 aaPredicted RBP12.34□□□□□ -0.43
CMTM3-213ENST00000566756 AMELXQ99217 191 aa12.34□□□□□ -0.43
CMTM3-213ENST00000566756 TRAV2A0A0B4J234 112 aa12.33□□□□□ -0.44
CMTM3-213ENST00000566756 J3QQQ9 107 aa12.33□□□□□ -0.44
CMTM3-213ENST00000566756 IGHV3-30P01768 117 aa12.33□□□□□ -0.44
CMTM3-213ENST00000566756 IGHV3-30-5P0DP03 117 aa12.33□□□□□ -0.44
CMTM3-213ENST00000566756 CRYBA4P53673 196 aa12.33□□□□□ -0.44
CMTM3-213ENST00000566756 UBE2D3P61077 147 aa12.33□□□□□ -0.44
CMTM3-213ENST00000566756 UBE2D2P62837 147 aa12.33□□□□□ -0.44
CMTM3-213ENST00000566756 ATP6V0E2Q8NHE4 81 aa12.33□□□□□ -0.44
CMTM3-213ENST00000566756 LEPROTO15243 131 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 P0DMU3 169 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 FAM231AP0DMU4 169 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 FAM231CP0DMU5 169 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 HOXD3P31249 432 aaPredicted RBP12.32□□□□□ -0.44
CMTM3-213ENST00000566756 NDUFA11Q86Y39 141 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 ESM1Q9NQ30 184 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 TMEM223A0PJW6 202 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 TSPAN13O95857 204 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 IGKV3-20P01619 116 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 TSPEAR-AS2P59090 65 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 Q6ZSV7 163 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 PTH2Q96A98 100 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 PYGO1Q9Y3Y4 419 aa12.32□□□□□ -0.44
CMTM3-213ENST00000566756 LGALS3P17931 250 aaKnown RBP12.31□□□□□ -0.44
CMTM3-213ENST00000566756 EMP1P54849 157 aa12.31□□□□□ -0.44
CMTM3-213ENST00000566756 SCGB1A1P11684 91 aa12.3□□□□□ -0.44
CMTM3-213ENST00000566756 SPAG8Q99932 426 aaPredicted RBP12.3□□□□□ -0.44
CMTM3-213ENST00000566756 RNASE1P07998 156 aaKnown RBP12.3□□□□□ -0.44
CMTM3-213ENST00000566756 ETDBQ3ZM63 59 aa12.3□□□□□ -0.44
CMTM3-213ENST00000566756 CFAP126Q5VTH2 177 aa12.3□□□□□ -0.44
CMTM3-213ENST00000566756 SPATA25Q9BR10 227 aa12.3□□□□□ -0.44
CMTM3-213ENST00000566756 TRBV20-1A0A075B6N2 111 aa12.29□□□□□ -0.44
CMTM3-213ENST00000566756 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
CMTM3-213ENST00000566756 IGLV4-3A0A075B6K6 122 aa12.28□□□□□ -0.44
CMTM3-213ENST00000566756 RHODO00212 210 aa12.28□□□□□ -0.44
CMTM3-213ENST00000566756 SH2D6Q7Z4S9 175 aa12.28□□□□□ -0.44
CMTM3-213ENST00000566756 C10orf126Q8N4M7 172 aa12.28□□□□□ -0.44
CMTM3-213ENST00000566756 ZNF418Q8TF45 676 aaPredicted RBP12.28□□□□□ -0.44
CMTM3-213ENST00000566756 A8MWV9 139 aa12.27□□□□□ -0.44
CMTM3-213ENST00000566756 CFC1BP0CG36 223 aa12.27□□□□□ -0.44
CMTM3-213ENST00000566756 CFC1P0CG37 223 aa12.27□□□□□ -0.44
CMTM3-213ENST00000566756 ZNF22P17026 224 aaPredicted RBP12.27□□□□□ -0.44
CMTM3-213ENST00000566756 SIGMAR1Q99720 223 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms