RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 FAM210BQ96KR6 192 aa6.37□□□□□ -1.39
SMPD3-207ENST00000566466 TENM2Q9NT68 2774 aa6.36□□□□□ -1.39
SMPD3-207ENST00000566466 RYR3Q15413 4870 aa6.36□□□□□ -1.39
SMPD3-207ENST00000566466 TGIF2-C20orf24A0A0A6YYL0 155 aa6.36□□□□□ -1.39
SMPD3-207ENST00000566466 PAX4O43316 350 aa6.36□□□□□ -1.39
SMPD3-207ENST00000566466 GYPEP15421 78 aa6.36□□□□□ -1.39
SMPD3-207ENST00000566466 CAMPP49913 170 aa6.36□□□□□ -1.39
SMPD3-207ENST00000566466 RIGQ13278 110 aa6.36□□□□□ -1.39
SMPD3-207ENST00000566466 RHOHQ15669 191 aa6.36□□□□□ -1.39
SMPD3-207ENST00000566466 MRPL51Q4U2R6 128 aaKnown RBP6.36□□□□□ -1.39
SMPD3-207ENST00000566466 NRACQ8N912 160 aa6.36□□□□□ -1.39
SMPD3-207ENST00000566466 RPL39LQ96EH5 51 aaKnown RBP6.36□□□□□ -1.39
SMPD3-207ENST00000566466 BTF3L4Q96K17 158 aa6.36□□□□□ -1.39
SMPD3-207ENST00000566466 TRBV24-1A0A075B6N3 115 aa6.35□□□□□ -1.39
SMPD3-207ENST00000566466 TRAV9-1A0A075B6T8 112 aa6.35□□□□□ -1.39
SMPD3-207ENST00000566466 SMKR1H3BMG3 65 aa6.35□□□□□ -1.39
SMPD3-207ENST00000566466 NCR2O95944 276 aa6.35□□□□□ -1.39
SMPD3-207ENST00000566466 MGPP08493 103 aa6.35□□□□□ -1.39
SMPD3-207ENST00000566466 UBE2D3P61077 147 aa6.35□□□□□ -1.39
SMPD3-207ENST00000566466 UBE2D2P62837 147 aa6.35□□□□□ -1.39
SMPD3-207ENST00000566466 SLAQ13239 276 aa6.35□□□□□ -1.39
SMPD3-207ENST00000566466 ZNF56Q15929 161 aa6.35□□□□□ -1.39
SMPD3-207ENST00000566466 TRBV10-1A0A0K0K1A3 114 aa6.34□□□□□ -1.39
SMPD3-207ENST00000566466 A0A1B0GW15 77 aa6.34□□□□□ -1.39
SMPD3-207ENST00000566466 GAGE12JA6NER3 117 aa6.34□□□□□ -1.39
SMPD3-207ENST00000566466 GAGE1Q13065 139 aa6.34□□□□□ -1.39
SMPD3-207ENST00000566466 GAGE4Q13068 117 aa6.34□□□□□ -1.39
SMPD3-207ENST00000566466 GAGE5Q13069 117 aa6.34□□□□□ -1.39
SMPD3-207ENST00000566466 ESRGQ1W209 222 aa6.34□□□□□ -1.39
SMPD3-207ENST00000566466 GAGE13Q4V321 117 aa6.34□□□□□ -1.39
SMPD3-207ENST00000566466 RASL11AQ6T310 242 aa6.34□□□□□ -1.39
SMPD3-207ENST00000566466 C15orf53Q8NAA6 179 aa6.34□□□□□ -1.39
SMPD3-207ENST00000566466 TRBV6-5A0A0K0K1A5 114 aa6.33□□□□□ -1.4
SMPD3-207ENST00000566466 PHOX2AO14813 284 aa6.33□□□□□ -1.4
SMPD3-207ENST00000566466 NUDT3O95989 172 aa6.33□□□□□ -1.4
SMPD3-207ENST00000566466 NTM-AS1Q6ZSK4 140 aa6.33□□□□□ -1.4
SMPD3-207ENST00000566466 BORCS7Q96B45 105 aa6.33□□□□□ -1.4
SMPD3-207ENST00000566466 KLK5Q9Y337 293 aaPredicted RBP6.33□□□□□ -1.4
SMPD3-207ENST00000566466 LINC00588Q9Y4M8 146 aa6.33□□□□□ -1.4
SMPD3-207ENST00000566466 ICOSQ9Y6W8 199 aa6.33□□□□□ -1.4
SMPD3-207ENST00000566466 COLCA2A8K830 154 aa6.32□□□□□ -1.4
SMPD3-207ENST00000566466 SMIM17P0DL12 118 aa6.32□□□□□ -1.4
SMPD3-207ENST00000566466 TCTAP57738 103 aa6.32□□□□□ -1.4
SMPD3-207ENST00000566466 KCNIP4Q6PIL6 250 aa6.32□□□□□ -1.4
SMPD3-207ENST00000566466 LYPD5Q6UWN5 251 aa6.32□□□□□ -1.4
SMPD3-207ENST00000566466 LINC00476Q8WZB0 136 aa6.32□□□□□ -1.4
SMPD3-207ENST00000566466 MRAP2Q96G30 205 aa6.32□□□□□ -1.4
SMPD3-207ENST00000566466 FRAS1Q86XX4 4008 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 IGLV2-18A0A075B6J9 118 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 TRBV7-3A0A075B6L6 115 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 D6R8Y8 96 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 F5H697 171 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 NPYP01303 97 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 POLR2KP53803 58 aaKnown RBP6.31□□□□□ -1.4
SMPD3-207ENST00000566466 TIRAPP58753 221 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 MRPL23Q16540 153 aaKnown RBP6.31□□□□□ -1.4
SMPD3-207ENST00000566466 CDPF1Q6NVV7 123 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 NEGR1Q7Z3B1 354 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 ZNRF2Q8NHG8 242 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 FRZBQ92765 325 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 PRADC1Q9BSG0 188 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 GNB1LQ9BYB4 327 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 NIT2Q9NQR4 276 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 SMCO4Q9NRQ5 59 aa6.31□□□□□ -1.4
SMPD3-207ENST00000566466 IGHV3-38A0A0C4DH36 116 aa6.3□□□□□ -1.4
SMPD3-207ENST00000566466 S100PP25815 95 aa6.3□□□□□ -1.4
SMPD3-207ENST00000566466 SRIP30626 198 aa6.3□□□□□ -1.4
SMPD3-207ENST00000566466 LGALS9CQ6DKI2 356 aa6.3□□□□□ -1.4
SMPD3-207ENST00000566466 Q8N3U1 123 aa6.3□□□□□ -1.4
SMPD3-207ENST00000566466 DEFB104AQ8WTQ1 72 aa6.3□□□□□ -1.4
SMPD3-207ENST00000566466 DNAJC30Q96LL9 226 aa6.3□□□□□ -1.4
SMPD3-207ENST00000566466 UPK3BQ9BT76 320 aa6.3□□□□□ -1.4
SMPD3-207ENST00000566466 TMEM70Q9BUB7 260 aa6.3□□□□□ -1.4
SMPD3-207ENST00000566466 KRTAP1-5Q9BYS1 174 aa6.3□□□□□ -1.4
SMPD3-207ENST00000566466 MRPS16Q9Y3D3 137 aaKnown RBP6.3□□□□□ -1.4
SMPD3-207ENST00000566466 DNAH2Q9P225 4427 aa6.3□□□□□ -1.4
SMPD3-207ENST00000566466 SDHAF1A6NFY7 115 aa6.29□□□□□ -1.4
SMPD3-207ENST00000566466 TNFRSF6BO95407 300 aa6.29□□□□□ -1.4
SMPD3-207ENST00000566466 HLA-DQA1P01909 254 aa6.29□□□□□ -1.4
SMPD3-207ENST00000566466 S100A8P05109 93 aa6.29□□□□□ -1.4
SMPD3-207ENST00000566466 RPL36AP83881 106 aaKnown RBP6.29□□□□□ -1.4
SMPD3-207ENST00000566466 KIAA1644Q3SXP7 199 aa6.29□□□□□ -1.4
SMPD3-207ENST00000566466 SMIM15Q7Z3B0 74 aa6.29□□□□□ -1.4
SMPD3-207ENST00000566466 WFDC10BQ8IUB3 73 aa6.29□□□□□ -1.4
SMPD3-207ENST00000566466 ATP6V0E2Q8NHE4 81 aa6.29□□□□□ -1.4
SMPD3-207ENST00000566466 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
SMPD3-207ENST00000566466 GTSF1LQ9H1H1 148 aa6.29□□□□□ -1.4
SMPD3-207ENST00000566466 TRBV27A0A0K0K1C4 114 aa6.28□□□□□ -1.4
SMPD3-207ENST00000566466 LCE6AA0A183 80 aa6.28□□□□□ -1.4
SMPD3-207ENST00000566466 PRSS47A8MTI9 375 aa6.28□□□□□ -1.4
SMPD3-207ENST00000566466 TSHBP01222 138 aa6.28□□□□□ -1.4
SMPD3-207ENST00000566466 S100A1P23297 94 aa6.28□□□□□ -1.4
SMPD3-207ENST00000566466 RPL32P62910 135 aaKnown RBP6.28□□□□□ -1.4
SMPD3-207ENST00000566466 OR10J3Q5JRS4 329 aa6.28□□□□□ -1.4
SMPD3-207ENST00000566466 ALKBH7Q9BT30 221 aaPredicted RBP6.28□□□□□ -1.4
SMPD3-207ENST00000566466 DNAH10Q8IVF4 4471 aa6.27□□□□□ -1.41
SMPD3-207ENST00000566466 TRBV6-8A0A0A6YYG3 113 aa6.27□□□□□ -1.41
SMPD3-207ENST00000566466 H7C1H1 209 aa6.27□□□□□ -1.41
SMPD3-207ENST00000566466 CKS2P33552 79 aa6.27□□□□□ -1.41
SMPD3-207ENST00000566466 SUMO2P61956 95 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms