RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 MED13LQ71F56 2210 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 M0R2P5 195 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 TSHBP01222 138 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 RRN3P1Q2M238 152 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 C20orf203Q8NBC4 194 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 DYNLRB2Q8TF09 96 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 RAX2Q96IS3 184 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 SPXQ9BT56 116 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 TRAV25A0A0B4J276 109 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 H3BMM0 161 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 KRTAP21-3Q3LHN1 58 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 CD300EQ496F6 205 aaPredicted RBP6.88□□□□□ -1.31
BBS4-210ENST00000566400 TMEM170BQ5T4T1 132 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 DNAJC30Q96LL9 226 aa6.88□□□□□ -1.31
BBS4-210ENST00000566400 G3V4G9 280 aa6.87□□□□□ -1.31
BBS4-210ENST00000566400 LGALS3P17931 250 aaKnown RBP6.87□□□□□ -1.31
BBS4-210ENST00000566400 DEFB131AP59861 70 aa6.87□□□□□ -1.31
BBS4-210ENST00000566400 VCX2Q9H322 139 aa6.87□□□□□ -1.31
BBS4-210ENST00000566400 K7ERJ3 54 aa6.86□□□□□ -1.31
BBS4-210ENST00000566400 LEPROTO15243 131 aa6.86□□□□□ -1.31
BBS4-210ENST00000566400 RPL39P62891 51 aaKnown RBP6.86□□□□□ -1.31
BBS4-210ENST00000566400 MORN3Q6PF18 240 aaPredicted RBP6.86□□□□□ -1.31
BBS4-210ENST00000566400 PLEKHB2Q96CS7 222 aa6.86□□□□□ -1.31
BBS4-210ENST00000566400 DUX3Q96PT4 197 aa6.86□□□□□ -1.31
BBS4-210ENST00000566400 NAA38Q9BRA0 125 aaKnown RBP6.86□□□□□ -1.31
BBS4-210ENST00000566400 TNFRSF18Q9Y5U5 241 aa6.86□□□□□ -1.31
BBS4-210ENST00000566400 SELENOKQ9Y6D0 94 aa6.86□□□□□ -1.31
BBS4-210ENST00000566400 SLURP1P55000 103 aa6.86□□□□□ -1.31
BBS4-210ENST00000566400 CMC4P56277 68 aaPredicted RBP6.86□□□□□ -1.31
BBS4-210ENST00000566400 DOPEY1Q5JWR5 2465 aa6.85□□□□□ -1.31
BBS4-210ENST00000566400 A0A0J9YY99 117 aa6.85□□□□□ -1.31
BBS4-210ENST00000566400 J3QQQ9 107 aa6.85□□□□□ -1.31
BBS4-210ENST00000566400 INSP01308 110 aa6.85□□□□□ -1.31
BBS4-210ENST00000566400 UBE2D1P51668 147 aa6.85□□□□□ -1.31
BBS4-210ENST00000566400 SLC25A29Q8N8R3 303 aa6.85□□□□□ -1.31
BBS4-210ENST00000566400 MAPK1IP1LQ8NDC0 245 aa6.85□□□□□ -1.31
BBS4-210ENST00000566400 MRPL16Q9NX20 251 aaKnown RBP6.85□□□□□ -1.31
BBS4-210ENST00000566400 MUC4Q99102 2169 aa6.85□□□□□ -1.31
BBS4-210ENST00000566400 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.85□□□□□ -1.313e-8■■■□□ 18.2
BBS4-210ENST00000566400 Q96MF0 132 aa6.85□□□□□ -1.31
BBS4-210ENST00000566400 SPANXA1Q9NS26 97 aa6.85□□□□□ -1.31
BBS4-210ENST00000566400 SPTAN1Q13813 2472 aaKnown RBP6.84□□□□□ -1.31
BBS4-210ENST00000566400 TMEM223A0PJW6 202 aa6.84□□□□□ -1.31
BBS4-210ENST00000566400 KNCNA6PVL3 124 aa6.84□□□□□ -1.31
BBS4-210ENST00000566400 GAGE13Q4V321 117 aa6.84□□□□□ -1.31
BBS4-210ENST00000566400 HIST2H2BCQ6DN03 193 aa6.84□□□□□ -1.31
BBS4-210ENST00000566400 TMEM61Q8N0U2 210 aa6.84□□□□□ -1.31
BBS4-210ENST00000566400 MAP6D1Q9H9H5 199 aa6.84□□□□□ -1.31
BBS4-210ENST00000566400 TRBV20-1A0A075B6N2 111 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 TMEM238C9JI98 176 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 P0DMU3 169 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 FAM231AP0DMU4 169 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 FAM231CP0DMU5 169 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 DEFB114Q30KQ6 69 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 KHDC1LQ5JSQ8 128 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 KLHL30-AS1Q8NEE0 82 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 ZNRF2Q8NHG8 242 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 DLX4Q92988 240 aaPredicted RBP6.83□□□□□ -1.32
BBS4-210ENST00000566400 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 TEP1Q99973 2627 aaKnown RBP6.83□□□□□ -1.32
BBS4-210ENST00000566400 CSMD1Q96PZ7 3565 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 ABCA12Q86UK0 2595 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 IGLV4-3A0A075B6K6 122 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 RPL24P83731 157 aaKnown RBP6.83□□□□□ -1.32
BBS4-210ENST00000566400 SMAGPQ0VAQ4 97 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 COTL1Q14019 142 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 AMELXQ99217 191 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 LINC01587Q99440 93 aa6.83□□□□□ -1.32
BBS4-210ENST00000566400 NOTCH2Q04721 2471 aa6.82□□□□□ -1.32
BBS4-210ENST00000566400 IGHV3-30P01768 117 aa6.82□□□□□ -1.32
BBS4-210ENST00000566400 IGHV3-30-5P0DP03 117 aa6.82□□□□□ -1.32
BBS4-210ENST00000566400 CD28P10747 220 aa6.82□□□□□ -1.32
BBS4-210ENST00000566400 MRPS36P82909 103 aaKnown RBP6.82□□□□□ -1.32
BBS4-210ENST00000566400 BEAN1Q3B7T3 259 aa6.82□□□□□ -1.32
BBS4-210ENST00000566400 AKAP6Q13023 2319 aa6.82□□□□□ -1.32
BBS4-210ENST00000566400 ITPR2Q14571 2701 aa6.82□□□□□ -1.32
BBS4-210ENST00000566400 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.81□□□□□ -1.32
BBS4-210ENST00000566400 SAP30O75446 220 aa6.81□□□□□ -1.32
BBS4-210ENST00000566400 IGHV3-53P01767 116 aa6.81□□□□□ -1.32
BBS4-210ENST00000566400 RBMY1A1P0DJD3 496 aaKnown RBP6.81□□□□□ -1.32
BBS4-210ENST00000566400 RBMY1CP0DJD4 496 aa6.81□□□□□ -1.32
BBS4-210ENST00000566400 ZNF22P17026 224 aaPredicted RBP6.81□□□□□ -1.32
BBS4-210ENST00000566400 RBMY1FQ15415 496 aaKnown RBP6.81□□□□□ -1.32
BBS4-210ENST00000566400 DEFB136Q30KP8 78 aa6.81□□□□□ -1.32
BBS4-210ENST00000566400 HTN1P15515 57 aa6.81□□□□□ -1.32
BBS4-210ENST00000566400 EMP1P54849 157 aa6.81□□□□□ -1.32
BBS4-210ENST00000566400 CFAP126Q5VTH2 177 aa6.81□□□□□ -1.32
BBS4-210ENST00000566400 NDUFA11Q86Y39 141 aa6.81□□□□□ -1.32
BBS4-210ENST00000566400 STHQ8IWL8 128 aa6.81□□□□□ -1.32
BBS4-210ENST00000566400 ATP6V0E2Q8NHE4 81 aa6.81□□□□□ -1.32
BBS4-210ENST00000566400 PRRC2AP48634 2157 aaKnown RBP6.8□□□□□ -1.32
BBS4-210ENST00000566400 FBN2P35556 2912 aa6.8□□□□□ -1.32
BBS4-210ENST00000566400 TINCRA0A1B0GVN0 87 aa6.8□□□□□ -1.32
BBS4-210ENST00000566400 H3BMG7 143 aa6.8□□□□□ -1.32
BBS4-210ENST00000566400 RS1O15537 224 aa6.8□□□□□ -1.32
BBS4-210ENST00000566400 C10orf126Q8N4M7 172 aa6.8□□□□□ -1.32
BBS4-210ENST00000566400 TIMM21Q9BVV7 248 aa6.8□□□□□ -1.32
BBS4-210ENST00000566400 RBMY1BA6NDE4 496 aaKnown RBP6.8□□□□□ -1.32
BBS4-210ENST00000566400 RBMY1EA6NEQ0 496 aaKnown RBP6.8□□□□□ -1.32
BBS4-210ENST00000566400 CIDEAO60543 219 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms