RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 FOXI2Q6ZQN5 318 aa6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 HIST1H4GQ99525 98 aa6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 SMIM2Q9BVW6 85 aa6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 ATRQ13535 2644 aa6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 TRBV7-9A0A0J9YWB2 115 aa6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 F8VRH5 84 aa6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 H7C1H1 209 aa6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 K7EMI3 77 aa6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 DUSP14O95147 198 aaKnown RBP6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 C12orf74Q32Q52 190 aa6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 ORMDL2Q53FV1 153 aa6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 SPANXB1Q9NS25 103 aaPredicted RBP6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 ZNF256Q9Y2P7 627 aaPredicted RBP6.98□□□□□ -1.29
CNEP1R1-206ENST00000565556 TRAV26-2A0A0B4J265 109 aa6.97□□□□□ -1.29
CNEP1R1-206ENST00000565556 A0A0J9YX75 114 aa6.97□□□□□ -1.29
CNEP1R1-206ENST00000565556 OR11H12B2RN74 326 aa6.97□□□□□ -1.29
CNEP1R1-206ENST00000565556 RRN3P1Q2M238 152 aa6.97□□□□□ -1.29
CNEP1R1-206ENST00000565556 C9orf66Q5T8R8 295 aa6.97□□□□□ -1.29
CNEP1R1-206ENST00000565556 OR11H2Q8NH07 326 aa6.97□□□□□ -1.29
CNEP1R1-206ENST00000565556 TRBV7-3A0A075B6L6 115 aa6.96□□□□□ -1.29
CNEP1R1-206ENST00000565556 A0A1B0GWB2 263 aa6.96□□□□□ -1.29
CNEP1R1-206ENST00000565556 DEFB131AP59861 70 aa6.96□□□□□ -1.29
CNEP1R1-206ENST00000565556 MAPKAPK5-AS1Q8N8E1 139 aa6.96□□□□□ -1.29
CNEP1R1-206ENST00000565556 WFDC9Q8NEX5 89 aa6.96□□□□□ -1.29
CNEP1R1-206ENST00000565556 ODF3Q96PU9 254 aa6.96□□□□□ -1.29
CNEP1R1-206ENST00000565556 TENM1Q9UKZ4 2725 aa6.96□□□□□ -1.3
CNEP1R1-206ENST00000565556 MYMXA0A1B0GTQ4 84 aa6.96□□□□□ -1.3
CNEP1R1-206ENST00000565556 F6UB75 175 aa6.96□□□□□ -1.3
CNEP1R1-206ENST00000565556 H3BVH4 76 aa6.96□□□□□ -1.3
CNEP1R1-206ENST00000565556 TOMM6Q96B49 74 aa6.96□□□□□ -1.3
CNEP1R1-206ENST00000565556 SCGB3A1Q96QR1 104 aa6.96□□□□□ -1.3
CNEP1R1-206ENST00000565556 SIGMAR1Q99720 223 aa6.96□□□□□ -1.3
CNEP1R1-206ENST00000565556 FAM110AQ9BQ89 295 aa6.96□□□□□ -1.3
CNEP1R1-206ENST00000565556 C20orf78Q9BR46 151 aa6.96□□□□□ -1.3
CNEP1R1-206ENST00000565556 MAP6D1Q9H9H5 199 aa6.96□□□□□ -1.3
CNEP1R1-206ENST00000565556 CHTOPQ9Y3Y2 248 aaKnown RBP6.96□□□□□ -1.3
CNEP1R1-206ENST00000565556 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
CNEP1R1-206ENST00000565556 A6NJY4 79 aa6.95□□□□□ -1.3
CNEP1R1-206ENST00000565556 CIDEAO60543 219 aa6.95□□□□□ -1.3
CNEP1R1-206ENST00000565556 BEAN1Q3B7T3 259 aa6.95□□□□□ -1.3
CNEP1R1-206ENST00000565556 FAM19A4Q96LR4 140 aa6.95□□□□□ -1.3
CNEP1R1-206ENST00000565556 M0R381 172 aa6.94□□□□□ -1.3
CNEP1R1-206ENST00000565556 MED14OSP0DP75 135 aa6.94□□□□□ -1.3
CNEP1R1-206ENST00000565556 AZU1P20160 251 aa6.94□□□□□ -1.3
CNEP1R1-206ENST00000565556 DEFB1P60022 68 aa6.94□□□□□ -1.3
CNEP1R1-206ENST00000565556 SUMO2P61956 95 aaKnown RBP6.94□□□□□ -1.3
CNEP1R1-206ENST00000565556 WFDC2Q14508 124 aa6.94□□□□□ -1.3
CNEP1R1-206ENST00000565556 GAGE13Q4V321 117 aa6.94□□□□□ -1.3
CNEP1R1-206ENST00000565556 SPATA25Q9BR10 227 aa6.94□□□□□ -1.3
CNEP1R1-206ENST00000565556 DPH3P1Q9H4G8 78 aa6.94□□□□□ -1.3
CNEP1R1-206ENST00000565556 SORL1Q92673 2214 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 GAGE12HA6NDE8 117 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 A8MTW9 85 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 H3BMG7 143 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 PPP1R17O96001 155 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 ASIPP42127 132 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 ODF3L2Q3SX64 289 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 APRG1Q8IVJ8 170 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 ZFAND2AQ8N6M9 145 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 NEXN-AS1Q8NBZ9 246 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 CLUHP3Q96NS8 147 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 FBN1P35555 2871 aaKnown RBP6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 TRAV21A0A0B4J279 112 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 H3BMM0 161 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 RASL10AQ92737 203 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 GTSF1LQ9H1H1 148 aa6.93□□□□□ -1.3
CNEP1R1-206ENST00000565556 AGRNO00468 2067 aa6.92□□□□□ -1.3
CNEP1R1-206ENST00000565556 LINC01549A6NIU2 74 aa6.92□□□□□ -1.3
CNEP1R1-206ENST00000565556 KNCNA6PVL3 124 aa6.92□□□□□ -1.3
CNEP1R1-206ENST00000565556 KLLNB2CW77 178 aa6.92□□□□□ -1.3
CNEP1R1-206ENST00000565556 WIPF1O43516 503 aa6.92□□□□□ -1.3
CNEP1R1-206ENST00000565556 S100A4P26447 101 aaKnown RBP6.92□□□□□ -1.3
CNEP1R1-206ENST00000565556 ETDBQ3ZM63 59 aa6.92□□□□□ -1.3
CNEP1R1-206ENST00000565556 PRR9Q5T870 116 aa6.92□□□□□ -1.3
CNEP1R1-206ENST00000565556 LYRM7Q5U5X0 104 aa6.92□□□□□ -1.3
CNEP1R1-206ENST00000565556 C2orf66Q6UXQ4 117 aa6.92□□□□□ -1.3
CNEP1R1-206ENST00000565556 PRADC1Q9BSG0 188 aa6.92□□□□□ -1.3
CNEP1R1-206ENST00000565556 PRO0461Q9UI25 63 aa6.92□□□□□ -1.3
CNEP1R1-206ENST00000565556 IGKV3-20P01619 116 aa6.91□□□□□ -1.3
CNEP1R1-206ENST00000565556 RNASE4P34096 147 aaKnown RBP6.91□□□□□ -1.3
CNEP1R1-206ENST00000565556 SMAGPQ0VAQ4 97 aa6.91□□□□□ -1.3
CNEP1R1-206ENST00000565556 AMTNQ6UX39 209 aa6.91□□□□□ -1.3
CNEP1R1-206ENST00000565556 STHQ8IWL8 128 aa6.91□□□□□ -1.3
CNEP1R1-206ENST00000565556 ATP6V0E2Q8NHE4 81 aa6.91□□□□□ -1.3
CNEP1R1-206ENST00000565556 BAALCQ8WXS3 180 aa6.91□□□□□ -1.3
CNEP1R1-206ENST00000565556 PHLDA3Q9Y5J5 127 aa6.91□□□□□ -1.3
CNEP1R1-206ENST00000565556 A0A1B0GV72 72 aa6.9□□□□□ -1.3
CNEP1R1-206ENST00000565556 ZNF815PA8K554 130 aa6.9□□□□□ -1.3
CNEP1R1-206ENST00000565556 MGPP08493 103 aa6.9□□□□□ -1.3
CNEP1R1-206ENST00000565556 HERVK_113P61574 105 aa6.9□□□□□ -1.3
CNEP1R1-206ENST00000565556 PAPPA-AS1Q5QFB9 102 aa6.9□□□□□ -1.3
CNEP1R1-206ENST00000565556 MORN3Q6PF18 240 aaPredicted RBP6.9□□□□□ -1.3
CNEP1R1-206ENST00000565556 SH2D6Q7Z4S9 175 aa6.9□□□□□ -1.3
CNEP1R1-206ENST00000565556 SPATA3Q8NHX4 192 aa6.9□□□□□ -1.3
CNEP1R1-206ENST00000565556 MRPL16Q9NX20 251 aaKnown RBP6.9□□□□□ -1.3
CNEP1R1-206ENST00000565556 PGPEP1Q9NXJ5 209 aa6.9□□□□□ -1.3
CNEP1R1-206ENST00000565556 CYSLTR1Q9Y271 337 aa6.9□□□□□ -1.3
CNEP1R1-206ENST00000565556 PRSS29PA6NIE9 313 aa6.9□□□□□ -1.31
CNEP1R1-206ENST00000565556 J3KRW8 73 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms