RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 OR10G8Q8NGN5 311 aa5.59□□□□□ -1.51
CAPN3-213ENST00000565173 CIRBP-AS1Q8TBR5 109 aa5.59□□□□□ -1.51
CAPN3-213ENST00000565173 RMI2Q96E14 147 aa5.59□□□□□ -1.51
CAPN3-213ENST00000565173 CHCHD7Q9BUK0 85 aa5.59□□□□□ -1.51
CAPN3-213ENST00000565173 PHLDA3Q9Y5J5 127 aa5.59□□□□□ -1.51
CAPN3-213ENST00000565173 URGCP-MRPS24S4R325 110 aa5.59□□□□□ -1.51
CAPN3-213ENST00000565173 A0A087WX48 190 aa5.58□□□□□ -1.52
CAPN3-213ENST00000565173 PDE6DO43924 150 aa5.58□□□□□ -1.52
CAPN3-213ENST00000565173 S100A9P06702 114 aaKnown RBP5.58□□□□□ -1.52
CAPN3-213ENST00000565173 PRR27Q6MZM9 219 aa5.58□□□□□ -1.52
CAPN3-213ENST00000565173 BAGE2Q86Y30 109 aa5.58□□□□□ -1.52
CAPN3-213ENST00000565173 ZFP82Q8N141 532 aa5.58□□□□□ -1.52
CAPN3-213ENST00000565173 LYPD6BQ8NI32 183 aa5.58□□□□□ -1.52
CAPN3-213ENST00000565173 C11orf52Q96A22 123 aa5.58□□□□□ -1.52
CAPN3-213ENST00000565173 UBE2WQ96B02 151 aa5.58□□□□□ -1.52
CAPN3-213ENST00000565173 MED9Q9NWA0 146 aa5.58□□□□□ -1.52
CAPN3-213ENST00000565173 TRBV6-8A0A0A6YYG3 113 aa5.57□□□□□ -1.52
CAPN3-213ENST00000565173 RPL35P42766 123 aaKnown RBP5.57□□□□□ -1.52
CAPN3-213ENST00000565173 RAB4BP61018 213 aa5.57□□□□□ -1.52
CAPN3-213ENST00000565173 RAB14P61106 215 aa5.57□□□□□ -1.52
CAPN3-213ENST00000565173 RPL36AP83881 106 aaKnown RBP5.57□□□□□ -1.52
CAPN3-213ENST00000565173 Q0VG73 95 aa5.57□□□□□ -1.52
CAPN3-213ENST00000565173 ELOBQ15370 118 aa5.57□□□□□ -1.52
CAPN3-213ENST00000565173 NEXN-AS1Q8NBZ9 246 aa5.57□□□□□ -1.52
CAPN3-213ENST00000565173 RPL36ALQ969Q0 106 aaKnown RBP5.57□□□□□ -1.52
CAPN3-213ENST00000565173 DERL1Q9BUN8 251 aa5.57□□□□□ -1.52
CAPN3-213ENST00000565173 MLST8Q9BVC4 326 aa5.57□□□□□ -1.52
CAPN3-213ENST00000565173 EIF5A2Q9GZV4 153 aaKnown RBP5.57□□□□□ -1.52
CAPN3-213ENST00000565173 RAB19A4D1S5 217 aa5.56□□□□□ -1.52
CAPN3-213ENST00000565173 TMEM262E9PQX1 116 aa5.56□□□□□ -1.52
CAPN3-213ENST00000565173 CEBPGP53567 150 aa5.56□□□□□ -1.52
CAPN3-213ENST00000565173 RPL19P84098 196 aaKnown RBP5.56□□□□□ -1.52
CAPN3-213ENST00000565173 MPV17L2Q567V2 206 aa5.56□□□□□ -1.52
CAPN3-213ENST00000565173 CENPWQ5EE01 88 aa5.56□□□□□ -1.52
CAPN3-213ENST00000565173 NTM-AS1Q6ZSK4 140 aa5.56□□□□□ -1.52
CAPN3-213ENST00000565173 OR10AG1Q8NH19 301 aa5.56□□□□□ -1.52
CAPN3-213ENST00000565173 FAM210AQ96ND0 272 aa5.56□□□□□ -1.52
CAPN3-213ENST00000565173 SSBP4Q9BWG4 385 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-213ENST00000565173 SNAI2O43623 268 aa5.55□□□□□ -1.52
CAPN3-213ENST00000565173 IGLV2-8P01709 118 aa5.55□□□□□ -1.52
CAPN3-213ENST00000565173 CXCL1P09341 107 aa5.55□□□□□ -1.52
CAPN3-213ENST00000565173 GNG4P50150 75 aa5.55□□□□□ -1.52
CAPN3-213ENST00000565173 KRTAP26-1Q6PEX3 210 aa5.55□□□□□ -1.52
CAPN3-213ENST00000565173 KCNIP4Q6PIL6 250 aa5.55□□□□□ -1.52
CAPN3-213ENST00000565173 C1orf43Q9BWL3 253 aa5.55□□□□□ -1.52
CAPN3-213ENST00000565173 KIF25-AS1Q9Y6Z4 181 aa5.55□□□□□ -1.52
CAPN3-213ENST00000565173 TMEM250H0YL14 139 aa5.54□□□□□ -1.52
CAPN3-213ENST00000565173 OXTP01178 125 aa5.54□□□□□ -1.52
CAPN3-213ENST00000565173 PRSS1P07477 247 aa5.54□□□□□ -1.52
CAPN3-213ENST00000565173 OR5AL1P0C617 328 aa5.54□□□□□ -1.52
CAPN3-213ENST00000565173 C14orf177Q52M58 125 aa5.54□□□□□ -1.52
CAPN3-213ENST00000565173 SERTAD4-AS1Q5TG53 156 aa5.54□□□□□ -1.52
CAPN3-213ENST00000565173 C15orf54Q8N8G6 183 aa5.54□□□□□ -1.52
CAPN3-213ENST00000565173 PRR34Q9NV39 138 aa5.54□□□□□ -1.52
CAPN3-213ENST00000565173 TRBV20OR9-2A0A075B6H5 130 aa5.53□□□□□ -1.52
CAPN3-213ENST00000565173 MUC21A0A0G2JKD1 596 aa5.53□□□□□ -1.52
CAPN3-213ENST00000565173 MUC21A0A140T8X8 626 aa5.53□□□□□ -1.52
CAPN3-213ENST00000565173 USP17L23D6RBM5 183 aa5.53□□□□□ -1.52
CAPN3-213ENST00000565173 ANGP03950 147 aaKnown RBP5.53□□□□□ -1.52
CAPN3-213ENST00000565173 SRP19P09132 144 aaKnown RBP5.53□□□□□ -1.52
CAPN3-213ENST00000565173 IFITM2Q01629 132 aa5.53□□□□□ -1.52
CAPN3-213ENST00000565173 PEA15Q15121 130 aa5.53□□□□□ -1.52
CAPN3-213ENST00000565173 ZNF56Q15929 161 aa5.53□□□□□ -1.52
CAPN3-213ENST00000565173 DGAT2L7PQ6IED9 249 aa5.53□□□□□ -1.52
CAPN3-213ENST00000565173 DAZAP1Q96EP5 407 aaKnown RBP5.53□□□□□ -1.52
CAPN3-213ENST00000565173 PANO1I0J062 215 aa5.52□□□□□ -1.53
CAPN3-213ENST00000565173 CRPP02741 224 aa5.52□□□□□ -1.53
CAPN3-213ENST00000565173 HNRNPA3P51991 378 aaKnown RBP5.52□□□□□ -1.53
CAPN3-213ENST00000565173 RBX1P62877 108 aa5.52□□□□□ -1.53
CAPN3-213ENST00000565173 SRSF3P84103 164 aaKnown RBP5.52□□□□□ -1.53
CAPN3-213ENST00000565173 MIAQ16674 131 aa5.52□□□□□ -1.53
CAPN3-213ENST00000565173 CLLU1Q5K131 121 aa5.52□□□□□ -1.53
CAPN3-213ENST00000565173 C9orf163Q8N9P6 203 aa5.52□□□□□ -1.53
CAPN3-213ENST00000565173 SMIM12Q96EX1 92 aa5.52□□□□□ -1.53
CAPN3-213ENST00000565173 SMIM7Q9BQ49 75 aa5.52□□□□□ -1.53
CAPN3-213ENST00000565173 CHCHD5Q9BSY4 110 aa5.52□□□□□ -1.53
CAPN3-213ENST00000565173 BIN3Q9NQY0 253 aa5.52□□□□□ -1.53
CAPN3-213ENST00000565173 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-213ENST00000565173 TNXBP22105 4242 aa5.52□□□□□ -1.53
CAPN3-213ENST00000565173 ZNF727A8MUV8 499 aa5.51□□□□□ -1.53
CAPN3-213ENST00000565173 C9JQL5 133 aa5.51□□□□□ -1.53
CAPN3-213ENST00000565173 F5H697 171 aa5.51□□□□□ -1.53
CAPN3-213ENST00000565173 M0QY20 66 aa5.51□□□□□ -1.53
CAPN3-213ENST00000565173 NDUFS6O75380 124 aaKnown RBP5.51□□□□□ -1.53
CAPN3-213ENST00000565173 HLA-DQA1P01909 254 aa5.51□□□□□ -1.53
CAPN3-213ENST00000565173 SSTP61278 116 aa5.51□□□□□ -1.53
CAPN3-213ENST00000565173 PKIAP61925 76 aa5.51□□□□□ -1.53
CAPN3-213ENST00000565173 GAGE6Q13070 117 aa5.51□□□□□ -1.53
CAPN3-213ENST00000565173 SPANXN1Q5VSR9 72 aa5.51□□□□□ -1.53
CAPN3-213ENST00000565173 SDIM1Q6ZPB5 146 aa5.51□□□□□ -1.53
CAPN3-213ENST00000565173 LINC00269Q8N2A0 174 aa5.51□□□□□ -1.53
CAPN3-213ENST00000565173 OCC1Q8TAD7 63 aa5.51□□□□□ -1.53
CAPN3-213ENST00000565173 K7EN84 100 aa5.5□□□□□ -1.53
CAPN3-213ENST00000565173 P01737 135 aa5.5□□□□□ -1.53
CAPN3-213ENST00000565173 RPL37AP61513 92 aaKnown RBP5.5□□□□□ -1.53
CAPN3-213ENST00000565173 IQCJQ1A5X6 159 aa5.5□□□□□ -1.53
CAPN3-213ENST00000565173 TMEM97Q5BJF2 176 aa5.5□□□□□ -1.53
CAPN3-213ENST00000565173 CLPSL2Q6UWE3 100 aa5.5□□□□□ -1.53
CAPN3-213ENST00000565173 C20orf203Q8NBC4 194 aa5.5□□□□□ -1.53
CAPN3-213ENST00000565173 OR2D3Q8NGH3 330 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms