RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SPATA12Q7Z6I5 190 aa14.06□□□□□ -0.16
CLN6-205ENST00000564846 OR4C5Q8NGB2 326 aa14.06□□□□□ -0.16
CLN6-205ENST00000564846 KIR2DL4Q99706 377 aa14.06□□□□□ -0.16
CLN6-205ENST00000564846 SMIM9A6NGZ8 99 aa14.05□□□□□ -0.16
CLN6-205ENST00000564846 PCP4L1A6NKN8 68 aa14.05□□□□□ -0.16
CLN6-205ENST00000564846 Q6ZTI0 123 aa14.05□□□□□ -0.16
CLN6-205ENST00000564846 IGHV3-53P01767 116 aa14.04□□□□□ -0.16
CLN6-205ENST00000564846 EGFEM1PQ0D2K5 195 aa14.04□□□□□ -0.16
CLN6-205ENST00000564846 IFI27L1Q96BM0 104 aa14.04□□□□□ -0.16
CLN6-205ENST00000564846 TRAV4A0A0B4J268 109 aa14.03□□□□□ -0.16
CLN6-205ENST00000564846 IGHV4-30-4P0DP06 118 aa14.03□□□□□ -0.16
CLN6-205ENST00000564846 G0S2P27469 103 aa14.03□□□□□ -0.16
CLN6-205ENST00000564846 X6R8D5 127 aa14.02□□□□□ -0.16
CLN6-205ENST00000564846 CIDEAO60543 219 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 ATP5LO75964 103 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 PKIAP61925 76 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 Q6ZSN1 163 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 NEGR1Q7Z3B1 354 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 ZNF664Q8N3J9 261 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 VAMP8Q9BV40 100 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 STAB1Q9NY15 2570 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 H0Y8G0 127 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 KRTAP10-11P60412 298 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 DNAJC30Q96LL9 226 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 C18orf15Q96N68 181 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 TNFRSF18Q9Y5U5 241 aa14.01□□□□□ -0.17
CLN6-205ENST00000564846 TSTD3H0UI37 97 aa14□□□□□ -0.17
CLN6-205ENST00000564846 I3L3M4 83 aa14□□□□□ -0.17
CLN6-205ENST00000564846 LINC01545Q5VT33 79 aa14□□□□□ -0.17
CLN6-205ENST00000564846 TOMM6Q96B49 74 aa14□□□□□ -0.17
CLN6-205ENST00000564846 ZNF479Q96JC4 524 aa14□□□□□ -0.17
CLN6-205ENST00000564846 TRGV2A0A075B6R0 118 aa13.99□□□□□ -0.17
CLN6-205ENST00000564846 GAGE12BA1L429 117 aa13.99□□□□□ -0.17
CLN6-205ENST00000564846 LINC01549A6NIU2 74 aa13.99□□□□□ -0.17
CLN6-205ENST00000564846 GAGE7O76087 117 aa13.99□□□□□ -0.17
CLN6-205ENST00000564846 GAGE12FP0CL80 117 aa13.99□□□□□ -0.17
CLN6-205ENST00000564846 GAGE12GP0CL81 117 aa13.99□□□□□ -0.17
CLN6-205ENST00000564846 GAGE12IP0CL82 117 aa13.99□□□□□ -0.17
CLN6-205ENST00000564846 P0DMU3 169 aa13.99□□□□□ -0.17
CLN6-205ENST00000564846 FAM231AP0DMU4 169 aa13.99□□□□□ -0.17
CLN6-205ENST00000564846 FAM231CP0DMU5 169 aa13.99□□□□□ -0.17
CLN6-205ENST00000564846 DEFB135Q30KP9 77 aa13.99□□□□□ -0.17
CLN6-205ENST00000564846 NACAE9PAV3 2078 aa13.98□□□□□ -0.17
CLN6-205ENST00000564846 RHOHQ15669 191 aa13.98□□□□□ -0.17
CLN6-205ENST00000564846 LGALS9CQ6DKI2 356 aa13.98□□□□□ -0.17
CLN6-205ENST00000564846 C2orf66Q6UXQ4 117 aa13.98□□□□□ -0.17
CLN6-205ENST00000564846 EMP1P54849 157 aa13.97□□□□□ -0.17
CLN6-205ENST00000564846 ATOH7Q8N100 152 aa13.97□□□□□ -0.17
CLN6-205ENST00000564846 NEXN-AS1Q8NBZ9 246 aa13.97□□□□□ -0.17
CLN6-205ENST00000564846 CYSLTR1Q9Y271 337 aa13.97□□□□□ -0.17
CLN6-205ENST00000564846 PAM16Q9Y3D7 125 aa13.97□□□□□ -0.17
CLN6-205ENST00000564846 A8MZ25 164 aa13.96□□□□□ -0.17
CLN6-205ENST00000564846 RIPPLY3P57055 190 aa13.96□□□□□ -0.17
CLN6-205ENST00000564846 PRO1933Q9H354 126 aa13.96□□□□□ -0.17
CLN6-205ENST00000564846 TRBV10-1A0A0K0K1A3 114 aa13.96□□□□□ -0.18
CLN6-205ENST00000564846 SCGB3A1Q96QR1 104 aa13.96□□□□□ -0.18
CLN6-205ENST00000564846 COL6A5A8TX70 2615 aa13.95□□□□□ -0.18
CLN6-205ENST00000564846 TRAV9-2A0A087WT02 112 aa13.95□□□□□ -0.18
CLN6-205ENST00000564846 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.95□□□□□ -0.18
CLN6-205ENST00000564846 TSHBP01222 138 aa13.95□□□□□ -0.18
CLN6-205ENST00000564846 PRSS1P07477 247 aa13.95□□□□□ -0.18
CLN6-205ENST00000564846 OR11H2Q8NH07 326 aa13.95□□□□□ -0.18
CLN6-205ENST00000564846 K7EQD1 137 aa13.94□□□□□ -0.18
CLN6-205ENST00000564846 LINC00612Q8N6U2 182 aa13.94□□□□□ -0.18
CLN6-205ENST00000564846 ERASQ7Z444 233 aa13.94□□□□□ -0.18
CLN6-205ENST00000564846 RNF183Q96D59 192 aa13.94□□□□□ -0.18
CLN6-205ENST00000564846 Q9UF83 564 aa13.94□□□□□ -0.18
CLN6-205ENST00000564846 CMYA5Q8N3K9 4069 aa13.93□□□□□ -0.18
CLN6-205ENST00000564846 G3V4G9 280 aa13.93□□□□□ -0.18
CLN6-205ENST00000564846 MIFP14174 115 aa13.93□□□□□ -0.18
CLN6-205ENST00000564846 SPATA45Q537H7 98 aa13.93□□□□□ -0.18
CLN6-205ENST00000564846 Q6ZN92 141 aa13.93□□□□□ -0.18
CLN6-205ENST00000564846 PMCHL2Q9BQD1 86 aa13.93□□□□□ -0.18
CLN6-205ENST00000564846 TP53TG1Q9Y2A0 90 aa13.93□□□□□ -0.18
CLN6-205ENST00000564846 LYRM9A8MSI8 78 aa13.92□□□□□ -0.18
CLN6-205ENST00000564846 DEFB104AQ8WTQ1 72 aa13.92□□□□□ -0.18
CLN6-205ENST00000564846 TRBV7-3A0A075B6L6 115 aa13.91□□□□□ -0.18
CLN6-205ENST00000564846 SAMD5Q5TGI4 173 aa13.91□□□□□ -0.18
CLN6-205ENST00000564846 SLC25A29Q8N8R3 303 aa13.91□□□□□ -0.18
CLN6-205ENST00000564846 ZMAT4Q9H898 229 aa13.91□□□□□ -0.18
CLN6-205ENST00000564846 TRBV6-4A0A1B0GX49 114 aa13.91□□□□□ -0.18
CLN6-205ENST00000564846 RPL36AP83881 106 aaKnown RBP13.91□□□□□ -0.18
CLN6-205ENST00000564846 ODF1Q14990 250 aa13.91□□□□□ -0.18
CLN6-205ENST00000564846 RPL36ALQ969Q0 106 aaKnown RBP13.91□□□□□ -0.18
CLN6-205ENST00000564846 IGHV4-28A0A0C4DH34 117 aa13.9□□□□□ -0.18
CLN6-205ENST00000564846 DEFB130BP0DP73 79 aa13.9□□□□□ -0.18
CLN6-205ENST00000564846 DEFB130AP0DP74 79 aa13.9□□□□□ -0.18
CLN6-205ENST00000564846 ZNRF2Q8NHG8 242 aa13.9□□□□□ -0.18
CLN6-205ENST00000564846 TRAV12-1A0A0B4J245 112 aa13.89□□□□□ -0.19
CLN6-205ENST00000564846 TRGV4A0A0C4DH28 118 aa13.89□□□□□ -0.19
CLN6-205ENST00000564846 IGIPA6NJ69 53 aa13.89□□□□□ -0.19
CLN6-205ENST00000564846 HSBP1L1C9JCN9 74 aa13.89□□□□□ -0.19
CLN6-205ENST00000564846 MAJINQ3KP22 176 aa13.89□□□□□ -0.19
CLN6-205ENST00000564846 C20orf203Q8NBC4 194 aa13.89□□□□□ -0.19
CLN6-205ENST00000564846 TMEM141Q96I45 108 aa13.89□□□□□ -0.19
CLN6-205ENST00000564846 TIMM17AQ99595 171 aa13.89□□□□□ -0.19
CLN6-205ENST00000564846 FHL2Q14192 279 aa13.88□□□□□ -0.19
CLN6-205ENST00000564846 Q8NAQ8 132 aa13.88□□□□□ -0.19
CLN6-205ENST00000564846 ANK2Q01484 3957 aa13.88□□□□□ -0.19
CLN6-205ENST00000564846 DDTP30046 118 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms